Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure.

PubWeight™: 41.48‹?› | Rank: Top 0.01% | All-Time Top 1000

🔗 View Article (PMID 10329189)

Published in J Mol Biol on May 21, 1999

Authors

D H Mathews1, J Sabina, M Zuker, D H Turner

Author Affiliations

1: Department of Chemistry, University of Rochester, Rochester, NY, 14627-0216, USA.

Articles citing this

(truncated to the top 100)

Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res (2003) 77.89

RNA-guided human genome engineering via Cas9. Science (2013) 48.29

MicroRNA targeting specificity in mammals: determinants beyond seed pairing. Mol Cell (2007) 38.42

A uniform system for microRNA annotation. RNA (2003) 20.28

Vienna RNA secondary structure server. Nucleic Acids Res (2003) 19.69

miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. Genes Dev (2002) 19.24

Fast and effective prediction of microRNA/target duplexes. RNA (2004) 18.10

CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana. Curr Biol (2002) 15.13

Identification of Drosophila MicroRNA targets. PLoS Biol (2003) 12.72

The colorectal microRNAome. Proc Natl Acad Sci U S A (2006) 11.59

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol Direct (2006) 11.31

Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure. Proc Natl Acad Sci U S A (2004) 10.35

Endogenous and silencing-associated small RNAs in plants. Plant Cell (2002) 10.07

ViennaRNA Package 2.0. Algorithms Mol Biol (2011) 9.43

The Vienna RNA websuite. Nucleic Acids Res (2008) 9.02

The C. elegans microRNA let-7 binds to imperfect let-7 complementary sites from the lin-41 3'UTR. Genes Dev (2004) 8.42

Fast and reliable prediction of noncoding RNAs. Proc Natl Acad Sci U S A (2005) 8.15

Identification of many microRNAs that copurify with polyribosomes in mammalian neurons. Proc Natl Acad Sci U S A (2003) 7.95

Mammalian microRNAs: experimental evaluation of novel and previously annotated genes. Genes Dev (2010) 7.14

Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A (2002) 6.93

Architecture and secondary structure of an entire HIV-1 RNA genome. Nature (2009) 6.12

Positional effects of short interfering RNAs targeting the human coagulation trigger Tissue Factor. Nucleic Acids Res (2002) 5.93

Automated design of synthetic ribosome binding sites to control protein expression. Nat Biotechnol (2009) 5.86

RNAstructure: software for RNA secondary structure prediction and analysis. BMC Bioinformatics (2010) 5.71

Evolutionary conservation of sequence and secondary structures in CRISPR repeats. Genome Biol (2007) 5.40

RNAML: a standard syntax for exchanging RNA information. RNA (2002) 5.34

Prediction of hybridization and melting for double-stranded nucleic acids. Biophys J (2004) 5.11

Thermodynamic parameters for DNA sequences with dangling ends. Nucleic Acids Res (2000) 5.11

OligoCalc: an online oligonucleotide properties calculator. Nucleic Acids Res (2007) 4.96

The roles of individual eukaryotic translation initiation factors in ribosomal scanning and initiation codon selection. Genes Dev (2002) 4.96

RNAMotif, an RNA secondary structure definition and search algorithm. Nucleic Acids Res (2001) 4.96

A statistical sampling algorithm for RNA secondary structure prediction. Nucleic Acids Res (2003) 4.62

3' end processing of a long nuclear-retained noncoding RNA yields a tRNA-like cytoplasmic RNA. Cell (2008) 4.54

Pfold: RNA secondary structure prediction using stochastic context-free grammars. Nucleic Acids Res (2003) 4.41

High-throughput SHAPE analysis reveals structures in HIV-1 genomic RNA strongly conserved across distinct biological states. PLoS Biol (2008) 4.40

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake. Genome Biol (2007) 4.27

Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2. Mol Cell (2007) 4.22

MicroRNAs regulate the expression of the alternative splicing factor nPTB during muscle development. Genes Dev (2007) 4.01

Tertiary contacts distant from the active site prime a ribozyme for catalysis. Cell (2006) 3.89

Automated de novo prediction of native-like RNA tertiary structures. Proc Natl Acad Sci U S A (2007) 3.87

Sfold web server for statistical folding and rational design of nucleic acids. Nucleic Acids Res (2004) 3.81

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble. RNA (2005) 3.80

The requirement for eukaryotic initiation factor 4A (elF4A) in translation is in direct proportion to the degree of mRNA 5' secondary structure. RNA (2001) 3.65

Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction. BMC Bioinformatics (2004) 3.60

RNA hairpins in noncoding regions of human brain and Caenorhabditis elegans mRNA are edited by adenosine deaminases that act on RNA. Proc Natl Acad Sci U S A (2002) 3.41

Design parameters to control synthetic gene expression in Escherichia coli. PLoS One (2009) 3.38

Essential role of cyclization sequences in flavivirus RNA replication. J Virol (2001) 3.31

A comprehensive comparison of comparative RNA structure prediction approaches. BMC Bioinformatics (2004) 3.20

Coevolution of group II intron RNA structures with their intron-encoded reverse transcriptases. RNA (2001) 3.03

Cloning and characterization of microRNAs from wheat (Triticum aestivum L.). Genome Biol (2007) 3.02

The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems. EMBO Rep (2000) 3.00

The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis. Plant Cell (2006) 2.96

Evidence for selection on synonymous mutations affecting stability of mRNA secondary structure in mammals. Genome Biol (2005) 2.94

HIV-1 can escape from RNA interference by evolving an alternative structure in its RNA genome. Nucleic Acids Res (2005) 2.93

A novel gene, erm(41), confers inducible macrolide resistance to clinical isolates of Mycobacterium abscessus but is absent from Mycobacterium chelonae. Antimicrob Agents Chemother (2009) 2.92

siRNA Selection Server: an automated siRNA oligonucleotide prediction server. Nucleic Acids Res (2004) 2.91

Visualizing the distribution and transport of mRNAs in living cells. Proc Natl Acad Sci U S A (2003) 2.90

Target prediction for small, noncoding RNAs in bacteria. Nucleic Acids Res (2006) 2.90

A benchmark of multiple sequence alignment programs upon structural RNAs. Nucleic Acids Res (2005) 2.89

A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria. Proc Natl Acad Sci U S A (2001) 2.88

IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions. Bioinformatics (2008) 2.88

Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization. RNA (2004) 2.86

Ab initio RNA folding by discrete molecular dynamics: from structure prediction to folding mechanisms. RNA (2008) 2.86

Murine noroviruses comprising a single genogroup exhibit biological diversity despite limited sequence divergence. J Virol (2007) 2.84

Tissue-dependent paired expression of miRNAs. Nucleic Acids Res (2007) 2.82

Widespread selection for local RNA secondary structure in coding regions of bacterial genes. Genome Res (2003) 2.81

Searching for IRES. RNA (2006) 2.78

Partition function and base pairing probabilities of RNA heterodimers. Algorithms Mol Biol (2006) 2.74

Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics. BMC Bioinformatics (2004) 2.73

Predicting oligonucleotide affinity to nucleic acid targets. RNA (1999) 2.67

The activity of siRNA in mammalian cells is related to structural target accessibility: a comparison with antisense oligonucleotides. Nucleic Acids Res (2003) 2.64

Specific residues of the influenza A virus hemagglutinin viral RNA are important for efficient packaging into budding virions. J Virol (2007) 2.62

A universal trend of reduced mRNA stability near the translation-initiation site in prokaryotes and eukaryotes. PLoS Comput Biol (2010) 2.57

Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction. BMC Bioinformatics (2004) 2.57

Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA. Nucleic Acids Res (2000) 2.56

Prediction of transcriptional terminators in Bacillus subtilis and related species. PLoS Comput Biol (2005) 2.54

Yeast telomerase RNA: a flexible scaffold for protein subunits. Proc Natl Acad Sci U S A (2004) 2.52

Unproductively spliced ribosomal protein mRNAs are natural targets of mRNA surveillance in C. elegans. Genes Dev (2000) 2.52

The hepatitis C viral NS3 protein is a processive DNA helicase with cofactor enhanced RNA unwinding. EMBO J (2002) 2.52

NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure. Nucleic Acids Res (2009) 2.49

Two alternating structures of the HIV-1 leader RNA. RNA (2001) 2.47

Understanding the transcriptome through RNA structure. Nat Rev Genet (2011) 2.46

An accurate and interpretable model for siRNA efficacy prediction. BMC Bioinformatics (2006) 2.46

EST analyses predict the existence of a population of chimeric microRNA precursor-mRNA transcripts expressed in normal human and mouse tissues. Genome Biol (2003) 2.46

MEG3 noncoding RNA: a tumor suppressor. J Mol Endocrinol (2012) 2.41

SHAPE-directed RNA secondary structure prediction. Methods (2010) 2.40

Retracted Reprogramming bacteria to seek and destroy an herbicide. Nat Chem Biol (2010) 2.39

RNA STRAND: the RNA secondary structure and statistical analysis database. BMC Bioinformatics (2008) 2.39

Kissing complex RNAs mediate interaction between the Fragile-X mental retardation protein KH2 domain and brain polyribosomes. Genes Dev (2005) 2.38

An enhanced RNA alignment benchmark for sequence alignment programs. Algorithms Mol Biol (2006) 2.35

RNA structure of trinucleotide repeats associated with human neurological diseases. Nucleic Acids Res (2003) 2.34

Noncoding RNA genes identified in AT-rich hyperthermophiles. Proc Natl Acad Sci U S A (2002) 2.33

Structure and expression of mobile ETnII retroelements and their coding-competent MusD relatives in the mouse. J Virol (2003) 2.33

Direct involvement of HERV-W Env glycoprotein in human trophoblast cell fusion and differentiation. Mol Cell Biol (2003) 2.32

Sequence motifs involved in the regulation of discontinuous coronavirus subgenomic RNA synthesis. J Virol (2004) 2.30

Prediction of rho-independent transcriptional terminators in Escherichia coli. Nucleic Acids Res (2001) 2.30

Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements. Insect Mol Biol (2006) 2.30

Expanded CUG repeat RNAs form hairpins that activate the double-stranded RNA-dependent protein kinase PKR. RNA (2000) 2.25

Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing. Nucleic Acids Res (2009) 2.25

Characterization of a genetic element carrying the macrolide efflux gene mef(A) in Streptococcus pneumoniae. Antimicrob Agents Chemother (2000) 2.21

Articles by these authors

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res (1981) 61.59

Improved free-energy parameters for predictions of RNA duplex stability. Proc Natl Acad Sci U S A (1986) 19.52

Improved predictions of secondary structures for RNA. Proc Natl Acad Sci U S A (1989) 11.52

Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs. Biochemistry (1998) 9.75

Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding. Proc Natl Acad Sci U S A (1994) 8.06

Predicting optimal and suboptimal secondary structure for RNA. Methods Enzymol (1990) 7.08

Base-stacking and base-pairing contributions to helix stability: thermodynamics of double-helix formation with CCGG, CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp. Biochemistry (1983) 6.81

Computer prediction of RNA structure. Methods Enzymol (1989) 6.36

Secondary structure of the Tetrahymena ribosomal RNA intervening sequence: structural homology with fungal mitochondrial intervening sequences. Proc Natl Acad Sci U S A (1983) 4.78

Some simple computational methods to improve the folding of large RNAs. Nucleic Acids Res (1984) 3.69

Predicting thermodynamic properties of RNA. Methods Enzymol (1995) 3.38

Thermodynamics of (dG--dC)3 double-helix formation in water and deuterium oxide. Biochemistry (1981) 3.30

Polymer-supported RNA synthesis and its application to test the nearest-neighbor model for duplex stability. Biochemistry (1986) 3.21

Investigation of the structural basis for thermodynamic stabilities of tandem GU mismatches: solution structure of (rGAGGUCUC)2 by two-dimensional NMR and simulated annealing. Biochemistry (1996) 2.96

Thermodynamic studies of RNA stability. J Biomol Struct Dyn (1984) 2.75

Testing the exon theory of genes: the evidence from protein structure. Science (1994) 2.71

Contributions of dangling end stacking and terminal base-pair formation to the stabilities of XGGCCp, XCCGGp, XGGCCYp, and XCCGGYp helixes. Biochemistry (1985) 2.70

Predicting oligonucleotide affinity to nucleic acid targets. RNA (1999) 2.67

A comparison of optimal and suboptimal RNA secondary structures predicted by free energy minimization with structures determined by phylogenetic comparison. Nucleic Acids Res (1991) 2.51

Stabilities of consecutive A.C, C.C, G.G, U.C, and U.U mismatches in RNA internal loops: Evidence for stable hydrogen-bonded U.U and C.C.+ pairs. Biochemistry (1991) 2.44

Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin. Science (1992) 2.44

Thermodynamics of single mismatches in RNA duplexes. Biochemistry (1999) 2.36

Structural organization of the 16S ribosomal RNA from E. coli. Topography and secondary structure. Nucleic Acids Res (1981) 2.32

Stability of XGCGCp, GCGCYp, and XGCGCYp helixes: an empirical estimate of the energetics of hydrogen bonds in nucleic acids. Biochemistry (1986) 2.32

Expanded CUG repeat RNAs form hairpins that activate the double-stranded RNA-dependent protein kinase PKR. RNA (2000) 2.25

Thermal unfolding of a group I ribozyme: the low-temperature transition is primarily disruption of tertiary structure. Biochemistry (1993) 2.13

Laser temperature-jump, spectroscopic, and thermodynamic study of salt effects on duplex formation by dGCATGC. Biochemistry (1989) 2.13

Laser temperature-jump study of stacking in adenylic acid polymers. Biochemistry (1979) 2.12

Structure-function relationship of Rous sarcoma virus leader RNA. Nucleic Acids Res (1982) 2.08

Sequence dependence for the energetics of dangling ends and terminal base pairs in ribonucleic acid. Biochemistry (1987) 1.95

Energetics of internal GU mismatches in ribooligonucleotide helixes. Biochemistry (1986) 1.92

Free energy contributions of G.U and other terminal mismatches to helix stability. Biochemistry (1986) 1.92

Structural analysis by energy dot plot of a large mRNA. J Mol Biol (1993) 1.86

Thermodynamics of three-way multibranch loops in RNA. Biochemistry (2001) 1.78

Effects of GA mismatches on the structure and thermodynamics of RNA internal loops. Biochemistry (1990) 1.76

Solvent effects on the stability of A7U7p. Biochemistry (1985) 1.73

Structure of a Bacillus subtilis endo-beta-1,4-glucanase gene. Nucleic Acids Res (1986) 1.73

[Secondary and topographic structure of ribosomal RNA 16S of Escherichia coli]. C R Seances Acad Sci D (1980) 1.73

Thermodynamic study of internal loops in oligoribonucleotides: symmetric loops are more stable than asymmetric loops. Biochemistry (1991) 1.71

Common structures of the 5' non-coding RNA in enteroviruses and rhinoviruses. Thermodynamical stability and statistical significance. J Mol Biol (1990) 1.70

Nearest-neighbor parameters for G.U mismatches: [formula; see text] is destabilizing in the contexts [formula; see text] and [formula; see text] but stabilizing in [formula; see text]. Biochemistry (1991) 1.70

Structure of (rGGCGAGCC)2 in solution from NMR and restrained molecular dynamics. Biochemistry (1993) 1.70

Fast evaluation of internal loops in RNA secondary structure prediction. Bioinformatics (1999) 1.69

Dynamics of ribozyme binding of substrate revealed by fluorescence-detected stopped-flow methods. Science (1992) 1.69

Secondary structure model of the RNA recognized by the reverse transcriptase from the R2 retrotransposable element. RNA (1997) 1.68

Thermodynamic and spectroscopic study of bulge loops in oligoribonucleotides. Biochemistry (1990) 1.63

A model for the stabilities of RNA hairpins based on a study of the sequence dependence of stability for hairpins of six nucleotides. Biochemistry (1994) 1.58

A periodic table of symmetric tandem mismatches in RNA. Biochemistry (1995) 1.55

Comparison of binding of mixed ribose-deoxyribose analogues of CUCU to a ribozyme and to GGAGAA by equilibrium dialysis: evidence for ribozyme specific interactions with 2' OH groups. Biochemistry (1991) 1.50

Measuring the thermodynamics of RNA secondary structure formation. Biopolymers (1997) 1.43

RNA hairpin loop stability depends on closing base pair. Nucleic Acids Res (1993) 1.40

Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Na+, in 10 mM Mg2+, and in the presence of substrate. Biochemistry (1990) 1.40

Thermodynamics of RNA-RNA duplexes with 2- or 4-thiouridines: implications for antisense design and targeting a group I intron. Biochemistry (1999) 1.36

Solvent effects on the kinetics and thermodynamics of stacking in poly(cytidylic acid). Biochemistry (1981) 1.36

The stability and structure of tandem GA mismatches in RNA depend on closing base pairs. Biochemistry (1994) 1.35

Kinetics for reaction of a circularized intervening sequence with CU, UCU, CUCU, and CUCUCU: mechanistic implications from the dependence on temperature and on oligomer and Mg2+ concentrations. Biochemistry (1988) 1.35

Factors affecting the thermodynamic stability of small asymmetric internal loops in RNA. Biochemistry (2000) 1.35

An NAD derivative produced during transfer RNA splicing: ADP-ribose 1"-2" cyclic phosphate. Science (1993) 1.33

Solvent effects on the dynamics of (dG-dC)3. Biopolymers (1983) 1.33

The kinetics of codon-anticodon interaction in yeast phenylalanine transfer RNA. J Mol Biol (1975) 1.32

Solution structure of (rGCGGACGC)2 by two-dimensional NMR and the iterative relaxation matrix approach. Biochemistry (1996) 1.31

Improved free energies for G.C base-pairs. J Mol Biol (1985) 1.31

Metrics on RNA secondary structures. J Comput Biol (2000) 1.30

Measuring residue associations in protein structures. Possible implications for protein folding. J Mol Biol (1994) 1.26

Sequence dependence of stability for coaxial stacking of RNA helixes with Watson-Crick base paired interfaces. Biochemistry (1994) 1.20

Thermodynamics of unpaired terminal nucleotides on short RNA helixes correlates with stacking at helix termini in larger RNAs. J Mol Biol (1999) 1.20

Thermodynamics of coaxially stacked helixes with GA and CC mismatches. Biochemistry (1996) 1.18

Solution structure of (rGGCAGGCC)2 by two-dimensional NMR and the iterative relaxation matrix approach. Biochemistry (1997) 1.17

Association of 2'-5' oligoribonucleotides. Nucleic Acids Res (1992) 1.17

Evidence that 5-hydroxytryptamine3 receptors mediate cytotoxic drug and radiation-evoked emesis. Br J Cancer (1987) 1.17

Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2). Biochemistry (2000) 1.14

Laser crosslinking of E. coli RNA polymerase and T7 DNA. Nucleic Acids Res (1982) 1.14

Effects of terminal mismatches on RNA stability: thermodynamics of duplex formation for ACCGGGp, ACCGGAp, and ACCGGCp. Biochemistry (1985) 1.13

Thermodynamics of nonsymmetric tandem mismatches adjacent to G.C base pairs in RNA. Biochemistry (1997) 1.13

Thermodynamic stabilities of internal loops with GU closing pairs in RNA. Biochemistry (2001) 1.12

Transient ADP-ribosylation of a 2'-phosphate implicated in its removal from ligated tRNA during splicing in yeast. J Biol Chem (1999) 1.12

NMR structures of r(GCAGGCGUGC)2 and determinants of stability for single guanosine-guanosine base pairs. Biochemistry (2000) 1.12

The alignment of protein structures in three dimensions. Bull Math Biol (1989) 1.12

Binding of guanosine and 3' splice site analogues to a group I ribozyme: interactions with functional groups of guanosine and with additional nucleotides. Biochemistry (1993) 1.10

The energetics of small internal loops in RNA. Biopolymers (2001) 1.09

The endogenous vascular elastase that governs development and progression of monocrotaline-induced pulmonary hypertension in rats is a novel enzyme related to the serine proteinase adipsin. J Clin Invest (1994) 1.09

Solvent effects on thermodynamics of double-helix formation in (dG-dC)3. Biochemistry (1981) 1.08

Replacement of the conserved G.U with a G-C pair at the cleavage site of the Tetrahymena ribozyme decreases binding, reactivity, and fidelity. Biochemistry (1994) 1.08

Effects of substrate structure on the kinetics of circle opening reactions of the self-splicing intervening sequence from Tetrahymena thermophila: evidence for substrate and Mg2+ binding interactions. Nucleic Acids Res (1989) 1.07

Fluorescence detected circular dichroism study of the anticodon loop of yeast tRNAPhe. Biochemistry (1975) 1.07

The time dependence of chemical modification reveals slow steps in the folding of a group I ribozyme. Biochemistry (1995) 1.07

Predicting common foldings of homologous RNAs. J Biomol Struct Dyn (1991) 1.07

Thermodynamic and activation parameters for binding of a pyrene-labeled substrate by the Tetrahymena ribozyme: docking is not diffusion-controlled and is driven by a favorable entropy change. Biochemistry (1995) 1.06

Comparative nucleotide sequences encoding the immunity proteins and the carboxyl-terminal peptides of colicins E2 and E3. Nucleic Acids Res (1984) 1.05

The Giardia lamblia actin gene and the phylogeny of eukaryotes. J Mol Evol (1995) 1.04

Structural plasticity in RNA and its role in the regulation of protein translation in coliphage Q beta. J Mol Biol (1998) 1.04

G.A and U.U mismatches can stabilize RNA internal loops of three nucleotides. Biochemistry (1996) 1.02

Structural features of a six-nucleotide RNA hairpin loop found in ribosomal RNA. Biochemistry (1996) 1.01

A Pneumocystis carinii group I intron ribozyme that does not require 2' OH groups on its 5' exon mimic for binding to the catalytic core. Biochemistry (1997) 0.98

Laser temperature jump study of solvent effects of poly(adenylic acid) stacking. Biochemistry (1980) 0.97

Thermodynamics of RNA internal loops with a guanosine-guanosine pair adjacent to another noncanonical pair. Biochemistry (2001) 0.97