Published in EMBO J on March 01, 2002
SF1 and SF2 helicases: family matters. Curr Opin Struct Biol (2010) 3.79
Spring-loaded mechanism of DNA unwinding by hepatitis C virus NS3 helicase. Science (2007) 3.70
RNA translocation and unwinding mechanism of HCV NS3 helicase and its coordination by ATP. Nature (2006) 3.67
Identification of residues required for RNA replication in domains II and III of the hepatitis C virus NS5A protein. J Virol (2007) 2.45
Multiple enzymatic activities associated with severe acute respiratory syndrome coronavirus helicase. J Virol (2004) 2.29
Protein-protein interactions between hepatitis C virus nonstructural proteins. J Virol (2003) 2.23
Kinetic redistribution of native and misfolded RNAs by a DEAD-box chaperone. Nature (2007) 2.00
Insights into RNA unwinding and ATP hydrolysis by the flavivirus NS3 protein. EMBO J (2008) 1.99
Structure of the Dengue virus helicase/nucleoside triphosphatase catalytic domain at a resolution of 2.4 A. J Virol (2005) 1.96
Hepatitis C virus subgenomic replicon requires an active NS3 RNA helicase. J Virol (2006) 1.77
The hepatitis C virus NS3 protein: a model RNA helicase and potential drug target. Curr Issues Mol Biol (2007) 1.76
Revisiting the central dogma one molecule at a time. Cell (2011) 1.75
Prp43p is a DEAH-box spliceosome disassembly factor essential for ribosome biogenesis. Mol Cell Biol (2006) 1.64
Studying hepatitis C virus: making the best of a bad virus. J Virol (2007) 1.62
The nonstructural protein 3 protease/helicase requires an intact protease domain to unwind duplex RNA efficiently. J Biol Chem (2003) 1.61
Ntr1 activates the Prp43 helicase to trigger release of lariat-intron from the spliceosome. Genes Dev (2007) 1.60
Hepatitis C virus non-structural protein 3 (HCV NS3): a multifunctional antiviral target. J Biol Chem (2010) 1.58
Hepatitis C viral NS3-4A protease activity is enhanced by the NS3 helicase. J Biol Chem (2008) 1.50
Visualizing ATP-dependent RNA translocation by the NS3 helicase from HCV. J Mol Biol (2010) 1.38
Two novel conserved motifs in the hepatitis C virus NS3 protein critical for helicase action. J Biol Chem (2003) 1.34
The C terminus of hepatitis C virus NS4A encodes an electrostatic switch that regulates NS5A hyperphosphorylation and viral replication. J Virol (2007) 1.32
Hepatitis C virus NS3 ATPases/helicases from different genotypes exhibit variations in enzymatic properties. J Virol (2003) 1.31
Function of the C-terminal domain of the DEAD-box protein Mss116p analyzed in vivo and in vitro. J Mol Biol (2007) 1.29
Hepatitis C virus proteins. World J Gastroenterol (2007) 1.28
Interactions between eIF4AI and its accessory factors eIF4B and eIF4H. RNA (2008) 1.23
Stepwise translocation of nucleic acid motors. Curr Opin Struct Biol (2010) 1.22
The hepatitis C virus Core protein is a potent nucleic acid chaperone that directs dimerization of the viral (+) strand RNA in vitro. Nucleic Acids Res (2004) 1.22
Understanding helicases as a means of virus control. Curr Pharm Des (2006) 1.18
Stimulation of hepatitis C virus (HCV) nonstructural protein 3 (NS3) helicase activity by the NS3 protease domain and by HCV RNA-dependent RNA polymerase. J Virol (2005) 1.18
Establishing a mechanistic basis for the large kinetic steps of the NS3 helicase. J Biol Chem (2008) 1.17
RNA helicase proteins as chaperones and remodelers. Annu Rev Biochem (2014) 1.17
DEAD-box helicases as integrators of RNA, nucleotide and protein binding. Biochim Biophys Acta (2013) 1.16
DNA mechanics as a tool to probe helicase and translocase activity. Nucleic Acids Res (2006) 1.13
The nucleolar protein Esf2 interacts directly with the DExD/H box RNA helicase, Dbp8, to stimulate ATP hydrolysis. Nucleic Acids Res (2006) 1.13
Human coronavirus 229E nonstructural protein 13: characterization of duplex-unwinding, nucleoside triphosphatase, and RNA 5'-triphosphatase activities. J Virol (2004) 1.11
A promoter activity is present in the DNA sequence corresponding to the hepatitis C virus 5' UTR. Nucleic Acids Res (2003) 1.11
Enhanced nucleic acid binding to ATP-bound hepatitis C virus NS3 helicase at low pH activates RNA unwinding. Nucleic Acids Res (2004) 1.11
The NS4A protein of hepatitis C virus promotes RNA-coupled ATP hydrolysis by the NS3 helicase. J Virol (2009) 1.10
Duplex RNA activated ATPases (DRAs): platforms for RNA sensing, signaling and processing. RNA Biol (2012) 1.10
Endonuclease substrate selectivity characterized with full-length PA of influenza A virus polymerase. Virology (2012) 1.07
The protease domain increases the translocation stepping efficiency of the hepatitis C virus NS3-4A helicase. J Biol Chem (2010) 1.06
The two-component NS2B-NS3 proteinase represses DNA unwinding activity of the West Nile virus NS3 helicase. J Biol Chem (2008) 1.04
NS3 helicase from the hepatitis C virus can function as a monomer or oligomer depending on enzyme and substrate concentrations. J Biol Chem (2008) 1.04
Integrative network analysis identifies key genes and pathways in the progression of hepatitis C virus induced hepatocellular carcinoma. BMC Med Genomics (2011) 1.02
Sequence-dependent base pair stepping dynamics in XPD helicase unwinding. Elife (2013) 1.02
Helicase inhibitors as specifically targeted antiviral therapy for hepatitis C. Future Virol (2009) 1.01
The DNA damage sensors ataxia-telangiectasia mutated kinase and checkpoint kinase 2 are required for hepatitis C virus RNA replication. J Virol (2008) 1.00
Hepatitis C virus NS3 helicase forms oligomeric structures that exhibit optimal DNA unwinding activity in vitro. J Biol Chem (2008) 1.00
Investigation of translocation, DNA unwinding, and protein displacement by NS3h, the helicase domain from the hepatitis C virus helicase. Biochemistry (2010) 0.98
Unmasking the active helicase conformation of nonstructural protein 3 from hepatitis C virus. J Virol (2011) 0.97
Phosphate release contributes to the rate-limiting step for unwinding by an RNA helicase. Nucleic Acids Res (2009) 0.96
Single strand binding proteins increase the processivity of DNA unwinding by the hepatitis C virus helicase. J Mol Biol (2007) 0.93
The macroscopic rate of nucleic acid translocation by hepatitis C virus helicase NS3h is dependent on both sugar and base moieties. J Mol Biol (2010) 0.93
RNA unwinding by the Trf4/Air2/Mtr4 polyadenylation (TRAMP) complex. Proc Natl Acad Sci U S A (2012) 0.93
Ddx42p--a human DEAD box protein with RNA chaperone activities. Nucleic Acids Res (2006) 0.91
Choosing between DNA and RNA: the polymer specificity of RNA helicase NPH-II. Nucleic Acids Res (2005) 0.88
Hepatitis C virus RNA replication and virus particle assembly require specific dimerization of the NS4A protein transmembrane domain. J Virol (2013) 0.83
Protease Inhibitors Block Multiple Functions of the NS3/4A Protease-Helicase during the Hepatitis C Virus Life Cycle. J Virol (2015) 0.83
Cooperative translocation enhances the unwinding of duplex DNA by SARS coronavirus helicase nsP13. Nucleic Acids Res (2010) 0.82
Human Enterovirus Nonstructural Protein 2CATPase Functions as Both an RNA Helicase and ATP-Independent RNA Chaperone. PLoS Pathog (2015) 0.82
RNA binding by the NS3 protease of the hepatitis C virus. Virus Res (2012) 0.82
Ded1p, a conserved DExD/H-box translation factor, can promote yeast L-A virus negative-strand RNA synthesis in vitro. Nucleic Acids Res (2004) 0.82
Helicase-mediated changes in RNA structure at the single-molecule level. RNA Biol (2013) 0.82
The linker region of NS3 plays a critical role in the replication and infectivity of hepatitis C virus. J Virol (2014) 0.81
Resistance analysis and characterization of a thiazole analogue, BP008, as a potent hepatitis C virus NS5A inhibitor. Antimicrob Agents Chemother (2011) 0.80
pH-dependent conformational changes in the HCV NS3 protein modulate its ATPase and helicase activities. PLoS One (2014) 0.79
Resistance studies of a dithiazol analogue, DBPR110, as a potential hepatitis C virus NS5A inhibitor in replicon systems. Antimicrob Agents Chemother (2012) 0.79
Melting of Duplex DNA in the Absence of ATP by the NS3 Helicase Domain through Specific Interaction with a Single-Strand/Double-Strand Junction. Biochemistry (2015) 0.78
Binding by the hepatitis C virus NS3 helicase partially melts duplex DNA. Biochemistry (2012) 0.78
Double-stranded DNA-induced localized unfolding of HCV NS3 helicase subdomain 2. Protein Sci (2003) 0.78
ATP dependent NS3 helicase interaction with RNA: insights from molecular simulations. Nucleic Acids Res (2015) 0.78
A positive-strand RNA virus uses alternative protein-protein interactions within a viral protease/cofactor complex to switch between RNA replication and virion morphogenesis. PLoS Pathog (2017) 0.77
Unwinding initiation by the viral RNA helicase NPH-II. J Mol Biol (2011) 0.77
Hepatitis C virus NS3 inhibitors: current and future perspectives. Biomed Res Int (2013) 0.77
Mechanisms of HCV NS3 helicase monitored by optical tweezers. Methods Mol Biol (2015) 0.77
Helicase processivity and not the unwinding velocity exhibits universal increase with force. Biophys J (2015) 0.76
Comparison of structural architecture of HCV NS3 genotype 1 versus Pakistani genotype 3a. Biomed Res Int (2014) 0.75
Statistical linkage analysis of substitutions in patient-derived sequences of genotype 1a hepatitis C virus nonstructural protein 3 exposes targets for immunogen design. J Virol (2014) 0.75
Structural analyses of the pre-mRNA splicing machinery. Protein Sci (2013) 0.75
Hepatitis C virus, human immunodeficiency virus and Pseudomonas phage PS5 triad share epitopes of immunogenic determinants. Virol J (2010) 0.75
The Spring α-Helix Coordinates Multiple Modes of HCV (Hepatitis C Virus) NS3 Helicase Action. J Biol Chem (2016) 0.75
Single-molecule imaging reveals the translocation and DNA looping dynamics of hepatitis C virus NS3 helicase. Protein Sci (2017) 0.75
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J Mol Biol (1999) 41.48
Replication of subgenomic hepatitis C virus RNAs in a hepatoma cell line. Science (1999) 24.31
Efficient initiation of HCV RNA replication in cell culture. Science (2000) 15.12
Global surveillance and control of hepatitis C. Report of a WHO Consultation organized in collaboration with the Viral Hepatitis Prevention Board, Antwerp, Belgium. J Viral Hepat (1999) 6.42
Thermodynamic parameters to predict stability of RNA/DNA hybrid duplexes. Biochemistry (1995) 6.40
Replication of hepatitis C virus. J Gen Virol (2000) 6.08
Hepatitis C virus replication in mice with chimeric human livers. Nat Med (2001) 5.87
Characterization of cell lines carrying self-replicating hepatitis C virus RNAs. J Virol (2001) 4.86
Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide. Cell (1996) 4.12
Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci (1999) 3.97
Synthesis, deprotection, analysis and purification of RNA and ribozymes. Nucleic Acids Res (1995) 3.59
Both NS3 and NS4A are required for proteolytic processing of hepatitis C virus nonstructural proteins. J Virol (1994) 3.51
Hepatitis C virus NS3 protein polynucleotide-stimulated nucleoside triphosphatase and comparison with the related pestivirus and flavivirus enzymes. J Virol (1993) 3.37
Molecular views of viral polyprotein processing revealed by the crystal structure of the hepatitis C virus bifunctional protease-helicase. Structure (1999) 3.37
Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase. Science (1997) 3.21
Subcellular localization, stability, and trans-cleavage competence of the hepatitis C virus NS3-NS4A complex expressed in tetracycline-regulated cell lines. J Virol (2000) 2.89
Hepatitis C and hepatocellular carcinoma. Hepatology (1997) 2.83
The crystal structure of hepatitis C virus NS3 proteinase reveals a trypsin-like fold and a structural zinc binding site. Cell (1996) 2.81
Hepatitis C virus-encoded nonstructural protein NS4A has versatile functions in viral protein processing. J Virol (1995) 2.76
Binding specificity determines polarity of DNA unwinding by the Sgs1 protein of S. cerevisiae. J Mol Biol (1999) 2.66
The DExH protein NPH-II is a processive and directional motor for unwinding RNA. Nature (2000) 2.48
A new RNA helicase isolated from HeLa cells that catalytically translocates in the 3' to 5' direction. J Biol Chem (1992) 2.33
The DEAH-box protein PRP22 is an ATPase that mediates ATP-dependent mRNA release from the spliceosome and unwinds RNA duplexes. EMBO J (1998) 2.31
The helicase activity associated with hepatitis C virus nonstructural protein 3 (NS3). J Virol (1996) 2.30
Complex formation between the NS3 serine-type proteinase of the hepatitis C virus and NS4A and its importance for polyprotein maturation. J Virol (1995) 2.29
Calculating the electrostatic properties of RNA provides new insights into molecular interactions and function. Nat Struct Biol (1999) 2.26
Pestivirus NS3 (p80) protein possesses RNA helicase activity. J Virol (1995) 2.06
Multiple sequence alignment in phylogenetic analysis. Mol Phylogenet Evol (2000) 2.04
Molecular structure of r(GCG)d(TATACGC): a DNA--RNA hybrid helix joined to double helical DNA. Nature (1982) 2.03
RecQ family helicases: roles in cancer and aging. Curr Opin Genet Dev (2000) 1.98
Hepatitis C virus nonstructural protein NS3 transforms NIH 3T3 cells. J Virol (1995) 1.87
The helicase from hepatitis C virus is active as an oligomer. J Biol Chem (1999) 1.80
A steady-state and pre-steady-state kinetic analysis of the NTPase activity associated with the hepatitis C virus NS3 helicase domain. J Biol Chem (1996) 1.71
Further characterization of the helicase activity of eIF4A. Substrate specificity. J Biol Chem (2001) 1.68
Characterization of RNA binding activity and RNA helicase activity of the hepatitis C virus NS3 protein. Biochem Biophys Res Commun (1996) 1.57
Fission yeast rad12+ regulates cell cycle checkpoint control and is homologous to the Bloom's syndrome disease gene. Mol Cell Biol (1998) 1.53
Complex formation of NS5B with NS3 and NS4A proteins of hepatitis C virus. Biochem Biophys Res Commun (1998) 1.52
Escherichia coli DNA helicase II (uvrD gene product) catalyzes the unwinding of DNA.RNA hybrids in vitro. Proc Natl Acad Sci U S A (1989) 1.47
Product release is the major contributor to kcat for the hepatitis C virus helicase-catalyzed strand separation of short duplex DNA. J Biol Chem (1998) 1.44
Unwinding of nucleic acids by HCV NS3 helicase is sensitive to the structure of the duplex. Nucleic Acids Res (2001) 1.31
Polynucleotide modulation of the protease, nucleoside triphosphatase, and helicase activities of a hepatitis C virus NS3-NS4A complex isolated from transfected COS cells. J Virol (1997) 1.25
DNA helicase activity of the hepatitis C virus nonstructural protein 3. Eur J Biochem (1997) 1.22
A novel recombinant single-chain hepatitis C virus NS3-NS4A protein with improved helicase activity. Protein Sci (1999) 1.15
The natural history of hepatitis C-A quandary. Hepatology (1998) 1.11
Enzymatic properties of hepatitis C virus NS3-associated helicase. J Gen Virol (2000) 1.10
Serine protease of hepatitis C virus expressed in insect cells as the NS3/4A complex. Biochemistry (1998) 1.07
Modulation of hepatitis C virus NS3 protease and helicase activities through the interaction with NS4A. Biochemistry (1999) 1.06
Nuclear localization of the NS3 protein of hepatitis C virus and factors affecting the localization. J Virol (1997) 0.94
Probing the relationship between RNA-stimulated ATPase and helicase activities of HCV NS3 using 2'-O-methyl RNA substrates. Biochemistry (2000) 0.93
RNA backbone: consensus all-angle conformers and modular string nomenclature (an RNA Ontology Consortium contribution). RNA (2008) 5.94
Crystal structure of a self-spliced group II intron. Science (2008) 4.66
mda-5: An interferon-inducible putative RNA helicase with double-stranded RNA-dependent ATPase activity and melanoma growth-suppressive properties. Proc Natl Acad Sci U S A (2002) 3.99
SF1 and SF2 helicases: family matters. Curr Opin Struct Biol (2010) 3.79
RNA translocation and unwinding mechanism of HCV NS3 helicase and its coordination by ATP. Nature (2006) 3.67
From unwinding to clamping - the DEAD box RNA helicase family. Nat Rev Mol Cell Biol (2011) 3.38
Protein displacement by DExH/D "RNA helicases" without duplex unwinding. Science (2004) 3.33
Structural insights into RNA recognition by RIG-I. Cell (2011) 3.25
RNA structure comparison, motif search and discovery using a reduced representation of RNA conformational space. Nucleic Acids Res (2003) 2.42
The DEAD-box protein Ded1 unwinds RNA duplexes by a mode distinct from translocating helicases. Nat Struct Mol Biol (2006) 2.34
ATP- and ADP-dependent modulation of RNA unwinding and strand annealing activities by the DEAD-box protein DED1. Biochemistry (2005) 2.26
ATP hydrolysis is required for DEAD-box protein recycling but not for duplex unwinding. Proc Natl Acad Sci U S A (2008) 2.14
The tad locus: postcards from the widespread colonization island. Nat Rev Microbiol (2007) 2.10
Periodic cycles of RNA unwinding and pausing by hepatitis C virus NS3 helicase. Nature (2004) 2.10
Stimulation of mammalian translation initiation factor eIF4A activity by a small molecule inhibitor of eukaryotic translation. Proc Natl Acad Sci U S A (2005) 2.00
Involvement of DEAD-box proteins in group I and group II intron splicing. Biochemical characterization of Mss116p, ATP hydrolysis-dependent and -independent mechanisms, and general RNA chaperone activity. J Mol Biol (2006) 1.99
Tight-adherence genes of Actinobacillus actinomycetemcomitans are required for virulence in a rat model. Proc Natl Acad Sci U S A (2003) 1.91
Dynamic regulation of alternative splicing by silencers that modulate 5' splice site competition. Cell (2008) 1.91
DEAD-box proteins unwind duplexes by local strand separation. Mol Cell (2007) 1.85
An automated phylogenetic key for classifying homeoboxes. Mol Phylogenet Evol (2002) 1.85
The identification of novel RNA structural motifs using COMPADRES: an automated approach to structural discovery. Nucleic Acids Res (2004) 1.70
The serine protease domain of hepatitis C viral NS3 activates RNA helicase activity by promoting the binding of RNA substrate. J Biol Chem (2007) 1.70
caos software for use in character-based DNA barcoding. Mol Ecol Resour (2008) 1.66
Backbone tracking by the SF2 helicase NPH-II. Nat Struct Mol Biol (2004) 1.61
Alternative roles for metal ions in enzyme catalysis and the implications for ribozyme chemistry. Chem Rev (2007) 1.59
The molecular interactions that stabilize RNA tertiary structure: RNA motifs, patterns, and networks. Acc Chem Res (2011) 1.51
Hepatitis C viral NS3-4A protease activity is enhanced by the NS3 helicase. J Biol Chem (2008) 1.50
Visualizing group II intron catalysis through the stages of splicing. Cell (2012) 1.50
Do DEAD-box proteins promote group II intron splicing without unwinding RNA? Mol Cell (2007) 1.50
A DEAD protein that activates intron self-splicing without unwinding RNA. Mol Cell (2006) 1.49
Discrete RNA libraries from pseudo-torsional space. J Mol Biol (2012) 1.46
Evaluating and learning from RNA pseudotorsional space: quantitative validation of a reduced representation for RNA structure. J Mol Biol (2007) 1.45
A single active-site region for a group II intron. Nat Struct Mol Biol (2005) 1.43
Degradation of hypomodified tRNA(iMet) in vivo involves RNA-dependent ATPase activity of the DExH helicase Mtr4p. RNA (2007) 1.39
Calculation of pKas in RNA: on the structural origins and functional roles of protonated nucleotides. J Mol Biol (2006) 1.39
The DEAD-box protein Ded1 modulates translation by the formation and resolution of an eIF4F-mRNA complex. Mol Cell (2011) 1.38
Defining the functional determinants for RNA surveillance by RIG-I. EMBO Rep (2013) 1.36
A structural analysis of the group II intron active site and implications for the spliceosome. RNA (2009) 1.31
An obligate intermediate along the slow folding pathway of a group II intron ribozyme. Nucleic Acids Res (2005) 1.30
Unwinding by local strand separation is critical for the function of DEAD-box proteins as RNA chaperones. J Mol Biol (2009) 1.30
Function of the C-terminal domain of the DEAD-box protein Mss116p analyzed in vivo and in vitro. J Mol Biol (2007) 1.29
Productive folding to the native state by a group II intron ribozyme. J Mol Biol (2002) 1.26
Structural basis for exon recognition by a group II intron. Nat Struct Mol Biol (2008) 1.24
RCrane: semi-automated RNA model building. Acta Crystallogr D Biol Crystallogr (2012) 1.24
An alternative route for the folding of large RNAs: apparent two-state folding by a group II intron ribozyme. J Mol Biol (2003) 1.24
Transferable vancomycin resistance in a community-associated MRSA lineage. N Engl J Med (2014) 1.23
Semiautomated model building for RNA crystallography using a directed rotameric approach. Proc Natl Acad Sci U S A (2010) 1.21
Solution structure of domain 5 of a group II intron ribozyme reveals a new RNA motif. Nat Struct Mol Biol (2004) 1.19
Tertiary architecture of the Oceanobacillus iheyensis group II intron. RNA (2009) 1.18
Robust translocation along a molecular monorail: the NS3 helicase from hepatitis C virus traverses unusually large disruptions in its track. J Mol Biol (2006) 1.18
The RNA helicase Mtr4p modulates polyadenylation in the TRAMP complex. Cell (2011) 1.17
Establishing a mechanistic basis for the large kinetic steps of the NS3 helicase. J Biol Chem (2008) 1.17
Single-molecule analysis of Mss116-mediated group II intron folding. Nature (2010) 1.17
Mechanism of Mss116 ATPase reveals functional diversity of DEAD-Box proteins. J Mol Biol (2011) 1.17
Visualizing the determinants of viral RNA recognition by innate immune sensor RIG-I. Structure (2012) 1.16
DEAD-box helicases as integrators of RNA, nucleotide and protein binding. Biochim Biophys Acta (2013) 1.16
Domains 2 and 3 interact to form critical elements of the group II intron active site. J Mol Biol (2003) 1.15
The RNA helicase database. Nucleic Acids Res (2010) 1.15
A folding control element for tertiary collapse of a group II intron ribozyme. Nat Struct Mol Biol (2006) 1.14
Hidden specificity in an apparently nonspecific RNA-binding protein. Nature (2013) 1.13
Inerolysin, a cholesterol-dependent cytolysin produced by Lactobacillus iners. J Bacteriol (2010) 1.13
Cigarette smoke increases Staphylococcus aureus biofilm formation via oxidative stress. Infect Immun (2012) 1.11
The pathway for DNA recognition and RNA integration by a group II intron retrotransposon. Mol Cell (2003) 1.10
Duplex RNA activated ATPases (DRAs): platforms for RNA sensing, signaling and processing. RNA Biol (2012) 1.10
The NS4A protein of hepatitis C virus promotes RNA-coupled ATP hydrolysis by the NS3 helicase. J Virol (2009) 1.10
Structural insights into RNA splicing. Curr Opin Struct Biol (2009) 1.09
Discriminatory RNP remodeling by the DEAD-box protein DED1. RNA (2006) 1.09
Linking the group II intron catalytic domains: tertiary contacts and structural features of domain 3. EMBO J (2005) 1.08
A group II intron inserted into a bacterial heat-shock operon shows autocatalytic activity and unusual thermostability. Biochemistry (2003) 1.07
The thermodynamic basis for viral RNA detection by the RIG-I innate immune sensor. J Biol Chem (2012) 1.06
Outer membrane components of the Tad (tight adherence) secreton of Aggregatibacter actinomycetemcomitans. J Bacteriol (2007) 1.06
A kinetic intermediate that regulates proper folding of a group II intron RNA. J Mol Biol (2007) 1.06
Group II intron folding under near-physiological conditions: collapsing to the near-native state. J Mol Biol (2006) 1.04
Three essential and conserved regions of the group II intron are proximal to the 5'-splice site. RNA (2007) 1.02
Evolution of hypervirulence by a MRSA clone through acquisition of a transposable element. Mol Microbiol (2014) 1.01
The receptor for branch-site docking within a group II intron active site. Mol Cell (2006) 1.01
The Ded1/DDX3 subfamily of DEAD-box RNA helicases. Crit Rev Biochem Mol Biol (2014) 1.00
The acidic domain of hepatitis C virus NS4A contributes to RNA replication and virus particle assembly. J Virol (2010) 1.00
Reciprocal illumination in the gene content tree of life. Syst Biol (2006) 0.99
Group II introns: highly specific endonucleases with modular structures and diverse catalytic functions. Methods (2002) 0.99
Protein-facilitated folding of group II intron ribozymes. J Mol Biol (2010) 0.99
Discovery of antivirulence agents against methicillin-resistant Staphylococcus aureus. Antimicrob Agents Chemother (2013) 0.99
Intrinsic RNA binding by the eukaryotic initiation factor 4F depends on a minimal RNA length but not on the m7G cap. J Biol Chem (2009) 0.98
The GANC tetraloop: a novel motif in the group IIC intron structure. J Mol Biol (2008) 0.97
RNA unwinding activity of the hepatitis C virus NS3 helicase is modulated by the NS5B polymerase. Biochemistry (2008) 0.96
DEAD-box-protein-assisted RNA structure conversion towards and against thermodynamic equilibrium values. J Mol Biol (2007) 0.96
Dual roles for the Mss116 cofactor during splicing of the ai5γ group II intron. Nucleic Acids Res (2010) 0.93
RNA unwinding by the Trf4/Air2/Mtr4 polyadenylation (TRAMP) complex. Proc Natl Acad Sci U S A (2012) 0.93
A conserved element that stabilizes the group II intron active site. RNA (2008) 0.92
Crystal structure of a group II intron in the pre-catalytic state. Nat Struct Mol Biol (2012) 0.91
Genome Sequence of Bacterial Interference Strain Staphylococcus aureus 502A. Genome Announc (2014) 0.91
The evolution of the major hepatitis C genotypes correlates with clinical response to interferon therapy. PLoS One (2009) 0.91
The NPH-II helicase displays efficient DNA x RNA helicase activity and a pronounced purine sequence bias. J Biol Chem (2010) 0.90
Double-stranded RNA-dependent ATPase DRH-3: insight into its role in RNAsilencing in Caenorhabditis elegans. J Biol Chem (2010) 0.88
Choosing between DNA and RNA: the polymer specificity of RNA helicase NPH-II. Nucleic Acids Res (2005) 0.88
Complete genome sequence of Aggregatibacter (Haemophilus) aphrophilus NJ8700. J Bacteriol (2009) 0.88
Lanthanide ions as probes for metal ions in the structure and catalytic mechanism of ribozymes. Met Ions Biol Syst (2003) 0.88