| Rank |
Title |
Journal |
Year |
PubWeight™‹?› |
|
1
|
Apolipoprotein L-I is the trypanosome lytic factor of human serum.
|
Nature
|
2003
|
4.33
|
|
2
|
Edgetic perturbation models of human inherited disorders.
|
Mol Syst Biol
|
2009
|
3.96
|
|
3
|
Apolipoprotein L-I promotes trypanosome lysis by forming pores in lysosomal membranes.
|
Science
|
2005
|
3.06
|
|
4
|
'Edgetic' perturbation of a C. elegans BCL2 ortholog.
|
Nat Methods
|
2009
|
1.74
|
|
5
|
Revisiting the Ramachandran plot: hard-sphere repulsion, electrostatics, and H-bonding in the alpha-helix.
|
Protein Sci
|
2003
|
1.73
|
|
6
|
A new potent secondary amphipathic cell-penetrating peptide for siRNA delivery into mammalian cells.
|
Mol Ther
|
2008
|
1.58
|
|
7
|
Exclusive ubiquitination and sumoylation on overlapping lysine residues mediate NF-kappaB activation by the human T-cell leukemia virus tax oncoprotein.
|
Mol Cell Biol
|
2005
|
1.47
|
|
8
|
Protein-nucleic acid recognition: statistical analysis of atomic interactions and influence of DNA structure.
|
Proteins
|
2005
|
1.46
|
|
9
|
Juxtamembrane protein segments that contribute to recruitment of cholesterol into domains.
|
Biochemistry
|
2006
|
1.36
|
|
10
|
Analysis of accessible surface of residues in proteins.
|
Protein Sci
|
2003
|
1.22
|
|
11
|
New basic membrane-destabilizing peptides for plasmid-based gene delivery in vitro and in vivo.
|
Mol Ther
|
2002
|
1.22
|
|
12
|
The Ramachandran plots of glycine and pre-proline.
|
BMC Struct Biol
|
2005
|
1.20
|
|
13
|
Atomic force microscopy of supported lipid bilayers.
|
Nat Protoc
|
2008
|
1.19
|
|
14
|
Aromatic side-chain interactions in proteins. I. Main structural features.
|
Proteins
|
2002
|
1.09
|
|
15
|
Prediction of peptide structure: how far are we?
|
Proteins
|
2006
|
1.08
|
|
16
|
Functional analysis of the cell division protein FtsW of Escherichia coli.
|
J Bacteriol
|
2004
|
1.06
|
|
17
|
Anti-hemostatic effects of a serpin from the saliva of the tick Ixodes ricinus.
|
J Biol Chem
|
2006
|
1.05
|
|
18
|
Cellular uptake of Antennapedia Penetratin peptides is a two-step process in which phase transfer precedes a tryptophan-dependent translocation.
|
Nucleic Acids Res
|
2003
|
1.04
|
|
19
|
In vitro characterization of the homogalacturonan-binding domain of the wall-associated kinase WAK1 using site-directed mutagenesis.
|
Phytochemistry
|
2006
|
1.03
|
|
20
|
The N-terminal juxtamembranous domain of KCNQ1 is critical for channel surface expression: implications in the Romano-Ward LQT1 syndrome.
|
Circ Res
|
2006
|
1.01
|
|
21
|
Cholesterol interaction with proteins that partition into membrane domains: an overview.
|
Subcell Biochem
|
2010
|
0.97
|
|
22
|
Partial atomic charges of amino acids in proteins.
|
Proteins
|
2004
|
0.97
|
|
23
|
TP0453, a concealed outer membrane protein of Treponema pallidum, enhances membrane permeability.
|
J Bacteriol
|
2005
|
0.96
|
|
24
|
Membrane topology of the Escherichia coli AmpG permease required for recycling of cell wall anhydromuropeptides and AmpC beta-lactamase induction.
|
Antimicrob Agents Chemother
|
2005
|
0.96
|
|
25
|
Exosites mediate the anti-inflammatory effects of a multifunctional serpin from the saliva of the tick Ixodes ricinus.
|
FEBS J
|
2009
|
0.96
|
|
26
|
Happy birthday cell penetrating peptides: already 20 years.
|
Biochim Biophys Acta
|
2010
|
0.95
|
|
27
|
Determination of the topology of the hydrophobic segment of mammalian diacylglycerol kinase epsilon in a cell membrane and its relationship to predictions from modeling.
|
J Mol Biol
|
2008
|
0.94
|
|
28
|
Hydrophobic substitutions in the first residue of the CRAC segment of the gp41 protein of HIV.
|
Biochemistry
|
2007
|
0.93
|
|
29
|
Interactions of ciprofloxacin with DPPC and DPPG: fluorescence anisotropy, ATR-FTIR and 31P NMR spectroscopies and conformational analysis.
|
Biochim Biophys Acta
|
2008
|
0.93
|
|
30
|
The role of proline in the membrane re-entrant helix of caveolin-1.
|
J Biol Chem
|
2010
|
0.91
|
|
31
|
Analysis of the C-terminal membrane anchor domains of hepatitis C virus glycoproteins E1 and E2: toward a topological model.
|
J Virol
|
2002
|
0.91
|
|
32
|
Characterization of a novel aphid prenyltransferase displaying dual geranyl/farnesyl diphosphate synthase activity.
|
FEBS Lett
|
2008
|
0.91
|
|
33
|
Aromatic side-chain interactions in proteins. II. Near- and far-sequence Phe-X pairs.
|
Proteins
|
2002
|
0.90
|
|
34
|
Distantly related lipocalins share two conserved clusters of hydrophobic residues: use in homology modeling.
|
BMC Struct Biol
|
2008
|
0.90
|
|
35
|
The Pseudomonas aeruginosa membranes: a target for a new amphiphilic aminoglycoside derivative?
|
Biochim Biophys Acta
|
2011
|
0.89
|
|
36
|
Ir-LBP, an ixodes ricinus tick salivary LTB4-binding lipocalin, interferes with host neutrophil function.
|
PLoS One
|
2008
|
0.88
|
|
37
|
Cell handling, membrane-binding properties, and membrane-penetration modeling approaches of pivampicillin and phthalimidomethylampicillin, two basic esters of ampicillin, in comparison with chloroquine and azithromycin.
|
Pharm Res
|
2003
|
0.88
|
|
38
|
Structural features conferring dual geranyl/farnesyl diphosphate synthase activity to an aphid prenyltransferase.
|
Insect Biochem Mol Biol
|
2009
|
0.88
|
|
39
|
Membrane destabilization induced by beta-amyloid peptide 29-42: importance of the amino-terminus.
|
Chem Phys Lipids
|
2002
|
0.87
|
|
40
|
Tilted properties of the 67-78 fragment of alpha-synuclein are responsible for membrane destabilization and neurotoxicity.
|
Proteins
|
2007
|
0.87
|
|
41
|
Effects of surfactin on membrane models displaying lipid phase separation.
|
Biochim Biophys Acta
|
2012
|
0.86
|
|
42
|
In silico predictions of 3D structures of linear and cyclic peptides with natural and non-proteinogenic residues.
|
J Pept Sci
|
2011
|
0.86
|
|
43
|
Prolactin/growth hormone-derived antiangiogenic peptides highlight a potential role of tilted peptides in angiogenesis.
|
Proc Natl Acad Sci U S A
|
2006
|
0.86
|
|
44
|
Insight into the cellular uptake mechanism of a secondary amphipathic cell-penetrating peptide for siRNA delivery.
|
Biochemistry
|
2010
|
0.86
|
|
45
|
Intact intracellular tail is critical for proper functioning of the tumor-associated, hypoxia-regulated carbonic anhydrase IX.
|
FEBS Lett
|
2009
|
0.85
|
|
46
|
Standardized evaluation of protein stability.
|
Biochim Biophys Acta
|
2010
|
0.84
|
|
47
|
HIV-1 gp41 and gp160 are hyperthermostable proteins in a mesophilic environment. Characterization of gp41 mutants.
|
Eur J Biochem
|
2004
|
0.83
|
|
48
|
Role of the lid hydrophobicity pattern in pancreatic lipase activity.
|
J Biol Chem
|
2005
|
0.83
|
|
49
|
Aromatic side-chain interactions in proteins. Near- and far-sequence His-X pairs.
|
Biochim Biophys Acta
|
2003
|
0.83
|
|
50
|
Interaction of the 106-126 prion peptide with lipid membranes and potential implication for neurotoxicity.
|
Biochem Biophys Res Commun
|
2005
|
0.83
|
|
51
|
Mutational analysis of the TRE2 oncogene encoding an inactive RabGAP.
|
Biotechnol Lett
|
2007
|
0.82
|
|
52
|
Ixodes ricinus tick lipocalins: identification, cloning, phylogenetic analysis and biochemical characterization.
|
PLoS One
|
2008
|
0.82
|
|
53
|
Transferrin-binding protein B of Neisseria meningitidis: sequence-based identification of the transferrin-Binding site confirmed by site-directed mutagenesis.
|
J Bacteriol
|
2004
|
0.82
|
|
54
|
Acylated and unacylated ghrelin binding to membranes and to ghrelin receptor: towards a better understanding of the underlying mechanisms.
|
Biochim Biophys Acta
|
2010
|
0.82
|
|
55
|
Characterization of the interactions between fluoroquinolone antibiotics and lipids: a multitechnique approach.
|
Biophys J
|
2008
|
0.81
|
|
56
|
Fusogenic Alzheimer's peptide fragment Abeta (29-42) in interaction with lipid bilayers: secondary structure, dynamics, and specific interaction with phosphatidyl ethanolamine polar heads as revealed by solid-state NMR.
|
Protein Sci
|
2005
|
0.81
|
|
57
|
Tilted peptides: the history.
|
Curr Protein Pept Sci
|
2006
|
0.80
|
|
58
|
Realistic modeling approaches of structure-function properties of CPPs in non-covalent complexes.
|
Biochim Biophys Acta
|
2010
|
0.80
|
|
59
|
Large changes in the CRAC segment of gp41 of HIV do not destroy fusion activity if the segment interacts with cholesterol.
|
Biochemistry
|
2008
|
0.80
|
|
60
|
Computational study of colipase interaction with lipid droplets and bile salt micelles.
|
Proteins
|
2008
|
0.79
|
|
61
|
Multi-scale simulation of the simian immunodeficiency virus fusion peptide.
|
J Phys Chem B
|
2012
|
0.79
|
|
62
|
SAHBNET, an accessible surface-based elastic network: an application to membrane protein.
|
Int J Mol Sci
|
2013
|
0.78
|
|
63
|
Modeling of non-covalent complexes of the cell-penetrating peptide CADY and its siRNA cargo.
|
Biochim Biophys Acta
|
2012
|
0.78
|
|
64
|
Determination of the minimal fusion peptide of bovine leukemia virus gp30.
|
Biochem Biophys Res Commun
|
2007
|
0.78
|
|
65
|
Self-assembling peptide-based nanoparticles for siRNA delivery in primary cell lines.
|
Small
|
2012
|
0.78
|
|
66
|
Mode of membrane interaction and fusogenic properties of a de novo transmembrane model peptide depend on the length of the hydrophobic core.
|
J Biol Chem
|
2007
|
0.78
|
|
67
|
PepLook: an innovative in silico tool for determination of structure, polymorphism and stability of peptides.
|
Adv Exp Med Biol
|
2009
|
0.78
|
|
68
|
Structural polymorphism of two CPP: an important parameter of activity.
|
Biochim Biophys Acta
|
2008
|
0.78
|
|
69
|
Probing the interaction forces between hydrophobic peptides and supported lipid bilayers using AFM.
|
J Mol Recognit
|
2007
|
0.77
|
|
70
|
Monolayer properties of uronic acid bicatenary derivatives at the air-water interface: effect of hydroxyl group stereochemistry evidenced by experimental and computational approaches.
|
Phys Chem Chem Phys
|
2011
|
0.77
|
|
71
|
The minimal fusion peptide of simian immunodeficiency virus corresponds to the 11 first residues of gp32.
|
J Pept Sci
|
2008
|
0.77
|
|
72
|
Insertion of X-ray structures of proteins in membranes.
|
J Mol Graph Model
|
2003
|
0.77
|
|
73
|
The SIV tilted peptide induces cylindrical reverse micelles in supported lipid bilayers.
|
Biochemistry
|
2006
|
0.77
|
|
74
|
Rational design of complementary peptides to the betaAmyloid 29-42 fusion peptide: an application of PepDesign.
|
Biochim Biophys Acta
|
2005
|
0.76
|
|
75
|
Piracetam inhibits the lipid-destabilising effect of the amyloid peptide Abeta C-terminal fragment.
|
Biochim Biophys Acta
|
2003
|
0.76
|
|
76
|
Domain formation and permeabilization induced by the saponin α-hederin and its aglycone hederagenin in a cholesterol-containing bilayer.
|
Langmuir
|
2014
|
0.76
|
|
77
|
A new in-silico method for determination of helical transmembrane domains based on the PepLook scan: application to IL-2Rβ and IL-2Rγc receptor chains.
|
BMC Struct Biol
|
2011
|
0.75
|
|
78
|
Fusogenic tilted peptides induce nanoscale holes in supported phosphatidylcholine bilayers.
|
Langmuir
|
2005
|
0.75
|
|
79
|
Impacts of the carbonyl group location of ester bond on interfacial properties of sugar-based surfactants: experimental and computational evidences.
|
J Phys Chem B
|
2009
|
0.75
|
|
80
|
Aromatic side-chain interactions in proteins: near- and far-sequence Tyr-X pairs.
|
Proteins
|
2004
|
0.75
|
|
81
|
Determination of the minimal fusion peptide of HIV, SIV and BLV fusion glycoproteins.
|
Adv Exp Med Biol
|
2009
|
0.75
|
|
82
|
Exploring the active site cavity of human pancreatic lipase.
|
Biochem Biophys Res Commun
|
2008
|
0.75
|