Published in J Nutr on June 01, 2003
Nutritional factors influencing intestinal health of the neonate. Adv Nutr (2012) 0.89
Bifidobacterium infantis 35624 protects against salmonella-induced reductions in digestive enzyme activity in mice by attenuation of the host inflammatory response. Clin Transl Gastroenterol (2012) 0.81
Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics. Nat Rev Gastroenterol Hepatol (2017) 0.78
A nutritional approach for the management of deoxynivalenol (DON) toxicity in the gastrointestinal tract of growing chickens. Int J Mol Sci (2008) 0.75
Functional metagenomic profiling of nine biomes. Nature (2008) 11.00
Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis. Nat Rev Microbiol (2008) 6.33
Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases. Proc Natl Acad Sci U S A (2009) 4.03
From cellulosomes to cellulosomics. Chem Rec (2008) 2.78
Molecular ecological analysis of the gastrointestinal microbiota: a review. J Nutr (2004) 2.41
The lung microbiome in moderate and severe chronic obstructive pulmonary disease. PLoS One (2012) 2.28
Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice. ISME J (2010) 1.95
New scientific paradigms for probiotics and prebiotics. J Clin Gastroenterol (2003) 1.88
Diet, microbiota, and microbial metabolites in colon cancer risk in rural Africans and African Americans. Am J Clin Nutr (2013) 1.87
Early life iron deficiency impairs spatial cognition in neonatal piglets. J Nutr (2012) 1.87
Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome. PLoS One (2008) 1.86
Phylogenetic characterization of fecal microbial communities of dogs fed diets with or without supplemental dietary fiber using 454 pyrosequencing. PLoS One (2010) 1.79
Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche. Microb Ecol (2010) 1.74
Reply to Maitre et al. J Nutr (2013) 1.67
Roles of Vibrio fischeri and nonsymbiotic bacteria in the dynamics of mucus secretion during symbiont colonization of the Euprymna scolopes light organ. Appl Environ Microbiol (2002) 1.67
Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes. ISME J (2013) 1.66
Evidence that hydrogen sulfide is a genotoxic agent. Mol Cancer Res (2006) 1.63
A metagenomic study of diet-dependent interaction between gut microbiota and host in infants reveals differences in immune response. Genome Biol (2012) 1.62
Commensal bacteria, redox stress, and colorectal cancer: mechanisms and models. Exp Biol Med (Maywood) (2004) 1.51
Cross-talk between probiotic bacteria and the host immune system. J Nutr (2007) 1.50
Heterogeneity of vaginal microbial communities within individuals. J Clin Microbiol (2009) 1.50
Characterization of the fecal microbiome from non-human wild primates reveals species specific microbial communities. PLoS One (2010) 1.49
Longitudinal investigation of the age-related bacterial diversity in the feces of commercial pigs. Vet Microbiol (2011) 1.48
Microbial shifts in the swine distal gut in response to the treatment with antimicrobial growth promoter, tylosin. Proc Natl Acad Sci U S A (2012) 1.43
Development of a high-dynamic range, GFP-based FRET probe sensitive to oxidative microenvironments. Exp Biol Med (Maywood) (2011) 1.42
Loss of sex and age driven differences in the gut microbiome characterize arthritis-susceptible 0401 mice but not arthritis-resistant 0402 mice. PLoS One (2012) 1.42
Modulations of the chicken cecal microbiome and metagenome in response to anticoccidial and growth promoter treatment. PLoS One (2011) 1.38
Pyrosequencing-based analysis of the mucosal microbiota in healthy individuals reveals ubiquitous bacterial groups and micro-heterogeneity. PLoS One (2011) 1.38
Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1. PLoS One (2009) 1.37
Abundance and diversity of mucosa-associated hydrogenotrophic microbes in the healthy human colon. ISME J (2011) 1.35
Transcriptome profiling of the small intestinal epithelium in germfree versus conventional piglets. BMC Genomics (2007) 1.35
GLP-2-mediated up-regulation of intestinal blood flow and glucose uptake is nitric oxide-dependent in TPN-fed piglets 1. Gastroenterology (2003) 1.31
Hydrogen sulfide induces direct radical-associated DNA damage. Mol Cancer Res (2007) 1.27
Microbial pathways in colonic sulfur metabolism and links with health and disease. Front Physiol (2012) 1.26
Type 1 fimbriae of Salmonella enterica serovar Typhimurium bind to enterocytes and contribute to colonization of swine in vivo. Infect Immun (2003) 1.26
Induction of mucosal tolerance in Peyer's patch-deficient, ligated small bowel loops. J Clin Invest (2005) 1.25
Contributions of the microbial hydrogen economy to colonic homeostasis. Nat Rev Gastroenterol Hepatol (2012) 1.24
Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential. PLoS One (2010) 1.24
Mechanisms of microbial hydrogen disposal in the human colon and implications for health and disease. Annu Rev Food Sci Technol (2010) 1.20
Selective growth of mucolytic bacteria including Clostridium perfringens in a neonatal piglet model of total parenteral nutrition. Am J Clin Nutr (2002) 1.19
Noninvasive stool-based detection of infant gastrointestinal development using gene expression profiles from exfoliated epithelial cells. Am J Physiol Gastrointest Liver Physiol (2010) 1.14
Suppressive subtractive hybridization as a tool for identifying genetic diversity in an environmental metagenome: the rumen as a model. Environ Microbiol (2004) 1.13
Longitudinal analysis of the lung microbiome in lung transplantation. FEMS Microbiol Lett (2012) 1.10
Abundance and diversity of dockerin-containing proteins in the fiber-degrading rumen bacterium, Ruminococcus flavefaciens FD-1. PLoS One (2010) 1.10
Quantification of the relative roles of niche and neutral processes in structuring gastrointestinal microbiomes. Proc Natl Acad Sci U S A (2012) 1.10
Isolated soy protein consumption reduces urinary albumin excretion and improves the serum lipid profile in men with type 2 diabetes mellitus and nephropathy. J Nutr (2004) 1.09
Diet and exercise orthogonally alter the gut microbiome and reveal independent associations with anxiety and cognition. Mol Neurodegener (2014) 1.08
Phage-bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome. Environ Microbiol (2011) 1.05
Cell migration and polarity on microfabricated gradients of extracellular matrix proteins. Langmuir (2006) 1.05
Redox control of the transsulfuration and glutathione biosynthesis pathways. Curr Opin Clin Nutr Metab Care (2002) 1.04
Hydrogen sulfide induces serum-independent cell cycle entry in nontransformed rat intestinal epithelial cells. FASEB J (2003) 1.04
Engineering redox-sensitive linkers for genetically encoded FRET-based biosensors. Exp Biol Med (Maywood) (2008) 1.04
Functional analysis of multiple single-stranded DNA-binding proteins from Methanosarcina acetivorans and their effects on DNA synthesis by DNA polymerase BI. J Biol Chem (2003) 1.04
Conservation and divergence in cellulosome architecture between two strains of Ruminococcus flavefaciens. J Bacteriol (2006) 1.03
Proteasome inhibition alters glucose-stimulated (pro)insulin secretion and turnover in pancreatic {beta}-cells. J Biol Chem (2005) 1.03
A multi-omic systems-based approach reveals metabolic markers of bacterial vaginosis and insight into the disease. PLoS One (2013) 1.02
Identification of Escherichia coli genes that are specifically expressed in a murine model of septicemic infection. Infect Immun (2002) 1.02
Structural determination and daily variations of porcine milk oligosaccharides. J Agric Food Chem (2010) 1.01
Low incidence of spontaneous type 1 diabetes in non-obese diabetic mice raised on gluten-free diets is associated with changes in the intestinal microbiome. PLoS One (2013) 1.00
The microbiome of the chicken gastrointestinal tract. Anim Health Res Rev (2012) 1.00
Supplementation of total parenteral nutrition with butyrate acutely increases structural aspects of intestinal adaptation after an 80% jejunoileal resection in neonatal piglets. JPEN J Parenter Enteral Nutr (2004) 1.00
Genome sequences and phylogenetic analysis of K88- and F18-positive porcine enterotoxigenic Escherichia coli. J Bacteriol (2011) 0.99
Bifidobacterium lactis Bb12 enhances intestinal antibody response in formula-fed infants: a randomized, double-blind, controlled trial. JPEN J Parenter Enteral Nutr (2012) 0.99
Do microbial interactions and cultivation media decrease the accuracy of Salmonella surveillance systems and outbreak investigations? J Food Prot (2009) 0.98
Fecal microbiota composition of breast-fed infants is correlated with human milk oligosaccharides consumed. J Pediatr Gastroenterol Nutr (2015) 0.98
Short bowel syndrome: highlights of patient management, quality of life, and survival. JPEN J Parenter Enteral Nutr (2013) 0.98
DNA damage and toxicogenomic analyses of hydrogen sulfide in human intestinal epithelial FHs 74 Int cells. Environ Mol Mutagen (2010) 0.97
Sickness behavior induced by endotoxin can be mitigated by the dietary soluble fiber, pectin, through up-regulation of IL-4 and Th2 polarization. Brain Behav Immun (2010) 0.97
Molecular ecological analysis of fecal bacterial populations from term infants fed formula supplemented with selected blends of prebiotics. Appl Environ Microbiol (2008) 0.97
Comparison of pulsed field gel electrophoresis and repetitive sequence polymerase chain reaction as genotyping methods for detection of genetic diversity and inferring transmission of Salmonella. Vet Microbiol (2004) 0.97
Use of pooled samples for the detection of Salmonella in feces by polymerase chain reaction. J Vet Diagn Invest (2006) 0.97
Effects of dietary fiber on the feline gastrointestinal metagenome. J Proteome Res (2012) 0.96
On the relationship between sialomucin and sulfomucin expression and hydrogenotrophic microbes in the human colonic mucosa. PLoS One (2011) 0.95
Pseudomonas aeruginosa pyocyanin causes airway goblet cell hyperplasia and metaplasia and mucus hypersecretion by inactivating the transcriptional factor FoxA2. Cell Microbiol (2011) 0.95
Regiospecific control of protein expression in cells cultured on two-component counter gradients of extracellular matrix proteins. Langmuir (2005) 0.95
TNF-alpha sensitizes HT-29 colonic epithelial cells to intestinal lactobacilli. Exp Biol Med (Maywood) (2002) 0.95
Cellulosome gene cluster analysis for gauging the diversity of the ruminal cellulolytic bacterium Ruminococcus flavefaciens. FEMS Microbiol Lett (2008) 0.94
Effects of prebiotic-containing infant formula on gastrointestinal tolerance and fecal microbiota in a randomized controlled trial. JPEN J Parenter Enteral Nutr (2012) 0.93
Temporal changes of multiple redox couples from proliferation to growth arrest in IEC-6 intestinal epithelial cells. Am J Physiol Cell Physiol (2005) 0.93
Protective role for nitric oxide during the endoplasmic reticulum stress response in pancreatic beta-cells. Am J Physiol Endocrinol Metab (2007) 0.93
Robust computational analysis of rRNA hypervariable tag datasets. PLoS One (2010) 0.93
Soy isoflavones and virus infections. J Nutr Biochem (2009) 0.93
Twists and turns in the development and maintenance of the mammalian small intestine epithelium. Birth Defects Res C Embryo Today (2005) 0.92
Formula-feeding reduces lactose digestive capacity in neonatal pigs. Br J Nutr (2006) 0.92
Isoflavones at concentrations present in soy infant formula inhibit rotavirus infection in vitro. J Nutr (2007) 0.92
The gut microbiota appears to compensate for seasonal diet variation in the wild black howler monkey (Alouatta pigra). Microb Ecol (2014) 0.89
Lactation and neonatal nutrition: defining and refining the critical questions. J Mammary Gland Biol Neoplasia (2012) 0.89
Arsenic (+ 3 oxidation state) methyltransferase and the methylation of arsenicals in the invertebrate chordate Ciona intestinalis. Toxicol Sci (2009) 0.88
The primate vaginal microbiome: comparative context and implications for human health and disease. Am J Phys Anthropol (2013) 0.88
Gastrointestinal and microbial responses to sulfate-supplemented drinking water in mice. Exp Biol Med (Maywood) (2003) 0.88
Imaging in real-time with FRET the redox response of tumorigenic cells to glutathione perturbations in a microscale flow. Integr Biol (Camb) (2010) 0.87
Diet and age affect intestinal morphology and large bowel fermentative end-product concentrations in senior and young adult dogs. J Nutr (2005) 0.87
Development of the infant intestine: implications for nutrition support. Nutr Clin Pract (2007) 0.86
Strain-specific genomic regions of Ruminococcus flavefaciens FD-1 as revealed by combinatorial random-phase genome sequencing and suppressive subtractive hybridization. Environ Microbiol (2004) 0.86
Human milk oligosaccharides inhibit rotavirus infectivity in vitro and in acutely infected piglets. Br J Nutr (2013) 0.86