Published in J Chem Inf Comput Sci on July 21, 2003
Descriptor-based protein remote homology identification. Protein Sci (2005) 0.94
A top-down systems biology view of microbiome-mammalian metabolic interactions in a mouse model. Mol Syst Biol (2007) 3.68
Large-scale human metabolomics studies: a strategy for data (pre-) processing and validation. Anal Chem (2006) 3.24
Summary recommendations for standardization and reporting of metabolic analyses. Nat Biotechnol (2005) 2.90
Probiotic modulation of symbiotic gut microbial-host metabolic interactions in a humanized microbiome mouse model. Mol Syst Biol (2008) 2.43
Systemic multicompartmental effects of the gut microbiome on mouse metabolic phenotypes. Mol Syst Biol (2008) 2.17
Colonization-induced host-gut microbial metabolic interaction. MBio (2011) 2.04
Rapid and noninvasive metabonomic characterization of inflammatory bowel disease. J Proteome Res (2007) 1.99
Precision of GE Lunar iDXA for the measurement of total and regional body composition in nonobese adults. J Clin Densitom (2012) 1.63
Soluble forms of Toll-like receptor (TLR)2 capable of modulating TLR2 signaling are present in human plasma and breast milk. J Immunol (2003) 1.61
A serpin from the gut bacterium Bifidobacterium longum inhibits eukaryotic elastase-like serine proteases. J Biol Chem (2006) 1.55
Plasma alkylresorcinols as a biomarker of whole-grain food consumption in a large population: results from the WHOLEheart Intervention Study. Am J Clin Nutr (2011) 1.49
Nutritional metabonomics: applications and perspectives. J Proteome Res (2007) 1.42
OMICS-driven biomarker discovery in nutrition and health. J Biotechnol (2006) 1.39
Quality control despite mistranslation caused by an ambiguous genetic code. Proc Natl Acad Sci U S A (2008) 1.36
Investigation of human blood plasma sample preparation for performing metabolomics using ultrahigh performance liquid chromatography/mass spectrometry. Anal Chem (2009) 1.35
Human metabolic phenotypes link directly to specific dietary preferences in healthy individuals. J Proteome Res (2007) 1.28
Maladaptive intestinal epithelial responses to life stress may predispose healthy women to gut mucosal inflammation. Gastroenterology (2008) 1.22
Metabonomic investigations of aging and caloric restriction in a life-long dog study. J Proteome Res (2007) 1.21
The direct recruitment of BLNK to immunoglobulin alpha couples the B-cell antigen receptor to distal signaling pathways. Mol Cell Biol (2002) 1.20
Panorganismal gut microbiome-host metabolic crosstalk. J Proteome Res (2009) 1.18
Domain closure, substrate specificity and catalysis of D-lactate dehydrogenase from Lactobacillus bulgaricus. J Mol Biol (2002) 1.18
Transgenomic metabolic interactions in a mouse disease model: interactions of Trichinella spiralis infection with dietary Lactobacillus paracasei supplementation. J Proteome Res (2006) 1.16
Top-down systems biology integration of conditional prebiotic modulated transgenomic interactions in a humanized microbiome mouse model. Mol Syst Biol (2008) 1.10
Stability and robustness of human metabolic phenotypes in response to sequential food challenges. J Proteome Res (2011) 1.10
Dietary modulation of gut functional ecology studied by fecal metabonomics. J Proteome Res (2010) 1.10
Effects of probiotic Lactobacillus paracasei treatment on the host gut tissue metabolic profiles probed via magic-angle-spinning NMR spectroscopy. J Proteome Res (2007) 1.05
Metabolic profiling strategy for discovery of nutritional biomarkers: proline betaine as a marker of citrus consumption. Am J Clin Nutr (2010) 1.04
A whole-grain cereal-rich diet increases plasma betaine, and tends to decrease total and LDL-cholesterol compared with a refined-grain diet in healthy subjects. Br J Nutr (2011) 1.03
Modulation of neonatal microbial recognition: TLR-mediated innate immune responses are specifically and differentially modulated by human milk. J Immunol (2006) 1.02
Multivariate modeling strategy for intercompartmental analysis of tissue and plasma 1H NMR spectrotypes. J Proteome Res (2009) 1.02
Experimental and computational approaches to quantitative proteomics: status quo and outlook. J Proteomics (2007) 1.01
Metabolic phenotyping of the Crohn's disease-like IBD etiopathology in the TNF(ΔARE/WT) mouse model. J Proteome Res (2011) 1.01
Validation of a FFQ for estimating whole-grain cereal food intake. Br J Nutr (2009) 1.00
ANIBAL, stable isotope-based quantitative proteomics by aniline and benzoic acid labeling of amino and carboxylic groups. Mol Cell Proteomics (2007) 0.98
A metabolic system-wide characterisation of the pig: a model for human physiology. Mol Biosyst (2011) 0.98
Metabolic assessment of gradual development of moderate experimental colitis in IL-10 deficient mice. J Proteome Res (2009) 0.97
Descriptor-based protein remote homology identification. Protein Sci (2005) 0.94
OMICS-rooted studies of milk proteins, oligosaccharides and lipids. J Proteomics (2009) 0.94
Biochemical characterization of rat intestine development using high-resolution magic-angle-spinning 1H NMR spectroscopy and multivariate data analysis. J Proteome Res (2005) 0.93
Gut microbiota modulate the metabolism of brown adipose tissue in mice. J Proteome Res (2011) 0.92
Metabotyping of Caenorhabditis elegans and their culture media revealed unique metabolic phenotypes associated to amino acid deficiency and insulin-like signaling. J Proteome Res (2011) 0.92
Metabolic effects of dark chocolate consumption on energy, gut microbiota, and stress-related metabolism in free-living subjects. J Proteome Res (2009) 0.92
Topographical variation in metabolic signatures of human gastrointestinal biopsies revealed by high-resolution magic-angle spinning 1H NMR spectroscopy. J Proteome Res (2007) 0.90
Early metabolic adaptation in C57BL/6 mice resistant to high fat diet induced weight gain involves an activation of mitochondrial oxidative pathways. J Proteome Res (2013) 0.89
Lycopene bioavailability and metabolism in humans: an accelerator mass spectrometry study. Am J Clin Nutr (2011) 0.89
A whole-grain-rich diet reduces urinary excretion of markers of protein catabolism and gut microbiota metabolism in healthy men after one week. J Nutr (2013) 0.88
Global metabolic profiling analysis on human urine by UPLC-TOFMS: issues and method validation in nutritional metabolomics. J Chromatogr B Analyt Technol Biomed Life Sci (2008) 0.88
N-linked glycan profiling of mature human milk by high-performance microfluidic chip liquid chromatography time-of-flight tandem mass spectrometry. J Agric Food Chem (2011) 0.88
Metabolomic applications to decipher gut microbial metabolic influence in health and disease. Front Physiol (2012) 0.87
Rapid and sensitive analysis of alkylresorcinols from cereal grains and products using HPLC-Coularray-based electrochemical detection. J Agric Food Chem (2009) 0.86
Alignment using variable penalty dynamic time warping. Anal Chem (2009) 0.86
Proteomics in nutrition: status quo and outlook for biomarkers and bioactives. J Proteome Res (2010) 0.86
Experimental metabonomic model of dietary variation and stress interactions. J Proteome Res (2006) 0.85
Magic angle spinning NMR and 1H-31P heteronuclear statistical total correlation spectroscopy of intact human gut biopsies. Anal Chem (2008) 0.85
Hydrophilic interaction liquid chromatography coupled to electrospray mass spectrometry of small polar compounds in food analysis. Anal Chem (2003) 0.85
Automated SPE-RP-HPLC fractionation of biofluids combined to off-line NMR spectroscopy for biomarker identification in metabonomics. J Chromatogr B Analyt Technol Biomed Life Sci (2008) 0.84
Characterization and quantification of odor-active compounds in unsaturated fatty acid/conjugated linoleic acid (UFA/CLA)-enriched butter and in conventional butter during storage and induced oxidation. J Agric Food Chem (2009) 0.84
Influence of fermentation medium composition on physicochemical surface properties of Lactobacillus acidophilus. Appl Environ Microbiol (2005) 0.84
Topographical variation in murine intestinal metabolic profiles in relation to microbiome speciation and functional ecological activity. J Proteome Res (2009) 0.83
Exploring the sequence-structure protein landscape in the glycosyltransferase family. Protein Sci (2003) 0.83
Proteomics at the center of nutrigenomics: comprehensive molecular understanding of dietary health effects. Nutrition (2009) 0.83
Monitoring healthy metabolic trajectories with nutritional metabonomics. Nutrients (2009) 0.82
Quantitative analysis of plasma caffeic and ferulic acid equivalents by liquid chromatography tandem mass spectrometry. J Chromatogr B Analyt Technol Biomed Life Sci (2009) 0.82
A plasma global metabolic profiling approach applied to an exercise study monitoring the effects of glucose, galactose and fructose drinks during post-exercise recovery. J Chromatogr B Analyt Technol Biomed Life Sci (2010) 0.81
Label-free quantitative proteomics of two Bifidobacterium longum strains. J Proteomics (2009) 0.81
Maternal deprivation affects the neuromuscular protein profile of the rat colon in response to an acute stressor later in life. J Proteomics (2008) 0.81
Specific dietary preferences are linked to differing gut microbial metabolic activity in response to dark chocolate intake. J Proteome Res (2012) 0.80
Proteomic methods in nutrition. Curr Opin Clin Nutr Metab Care (2006) 0.80
Biomarkers of nutrient bioactivity and efficacy: a route toward personalized nutrition. J Clin Gastroenterol (2012) 0.80
Proteomics application exercise of the Swiss Proteomics Society: report of the SPS'02 session. Proteomics (2003) 0.79
Synthesis and sensory characterization of novel umami-tasting glutamate glycoconjugates. J Agric Food Chem (2003) 0.79
Rapid identification of differentiation markers from whole epithelial cells by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry and statistical analysis. Rapid Commun Mass Spectrom (2008) 0.78
Metabotyping of biofluids reveals stress-based differences in gut permeability in healthy individuals. J Proteome Res (2009) 0.78
Nondairy creamer, but not milk, delays the appearance of coffee phenolic acid equivalents in human plasma. J Nutr (2009) 0.78
Proteomics of the rat gut: analysis of the myenteric plexus-longitudinal muscle preparation. Proteomics (2005) 0.78
Metabolic phenotype modulation by caloric restriction in a lifelong dog study. J Proteome Res (2013) 0.78
Chemometric strategy for modeling metabolic biological space along the gastrointestinal tract and assessing microbial influences. Anal Chem (2010) 0.78
Self-modeling curve resolution recovery of temporal metabolite signal modulation in NMR spectroscopic data sets: application to a life-long caloric restriction study in dogs. Anal Chem (2008) 0.78
Rapid enrichment of bioactive milk proteins and iterative, consolidated protein identification by multidimensional protein identification technology. Proteomics (2005) 0.78
Mass spectrometry in nutrition: understanding dietary health effects at the molecular level. Mass Spectrom Rev (2007) 0.78
Combining protein identification and quantification: C-terminal isotope-coded tagging using sulfanilic acid. Rapid Commun Mass Spectrom (2006) 0.77
The role of liquid chromatography and flow injection analyses coupled to isotope ratio mass spectrometry for studying human in vivo glucose metabolism. Rapid Commun Mass Spectrom (2011) 0.77
Differentially isotope-coded N-terminal protein sulphonation: combining protein identification and quantification. Proteomics (2006) 0.77
Weaning diet induces sustained metabolic phenotype shift in the pig and influences host response to Bifidobacterium lactis NCC2818. Gut (2012) 0.77
Mass spectrometry for nutritional peptidomics: How to analyze food bioactives and their health effects. J Proteomics (2011) 0.77
Natural carbon isotope abundance of plasma metabolites and liver tissue differs between diabetic and non-diabetic Zucker diabetic fatty rats. PLoS One (2013) 0.76
Nutritional metabonomics: an approach to promote personalized health and wellness. Chimia (Aarau) (2011) 0.76
Isotopomics: a top-down systems biology approach for understanding dynamic metabolism in rats using [1,2-(13)C(2)] acetate. Anal Chem (2010) 0.76
A nutrigenomics view of protein intake: macronutrient, bioactive peptides, and protein turnover. Prog Mol Biol Transl Sci (2012) 0.76
Proteomics in nutrition and health. Comb Chem High Throughput Screen (2005) 0.75
Food peptidomics: large scale analysis of small bioactive peptides--a pilot study. J Proteomics (2013) 0.75
Everyday eating experiences of chocolate and non-chocolate snacks impact postprandial anxiety, energy and emotional states. Nutrients (2012) 0.75
Simultaneous measurement of 13C- and 15N-isotopic enrichments of threonine by mass spectrometry. Rapid Commun Mass Spectrom (2009) 0.75
Winter/spring changes in fatty acid composition of farmhouse Idiazabal cheese due to different flock management systems. J Agric Food Chem (2009) 0.75
Special issue "Genome regulation". J Proteomics (2012) 0.75
High accuracy alignment facility for the receiver and transmitter of the BepiColombo Laser Altimeter. Appl Opt (2012) 0.75
Toward protein biomarkers for allergy: CD4+ T cell proteomics in allergic and nonallergic subjects sampled in and out of pollen season. J Proteome Res (2011) 0.75
Correction to 2-Furoylglycine as a Candidate Biomarker of Coffee Consumption. J Agric Food Chem (2016) 0.75