Quantitative analysis of cyclic beta-turn models.

PubWeight™: 1.03‹?› | Rank: Top 15%

🔗 View Article (PMC 2142200)

Published in Protein Sci on March 01, 1992

Authors

A Perczel1, G D Fasman

Author Affiliations

1: Graduate Department of Biochemistry, Brandeis University, Waltham, Massachusetts 02254-9110.

Articles citing this

Thermal stability and conformational transitions of scrapie amyloid (prion) protein correlate with infectivity. Protein Sci (1993) 1.59

Single-molecule spectroscopy of the temperature-induced collapse of unfolded proteins. Proc Natl Acad Sci U S A (2009) 1.52

Two amyloid States of the prion protein display significantly different folding patterns. J Mol Biol (2010) 1.16

Differentiation between transmembrane helices and peripheral helices by the deconvolution of circular dichroism spectra of membrane proteins. Protein Sci (1992) 1.13

Elastin-like peptide amphiphiles form nanofibers with tunable length. Biomacromolecules (2012) 0.85

Calcium interacts with antifreeze proteins and chitinase from cold-acclimated winter rye. Plant Physiol (2004) 0.82

Characterization and regulation of the osmolyte betaine synthesizing enzymes GSMT and SDMT from halophilic methanogen Methanohalophilus portucalensis. PLoS One (2011) 0.81

Synthesis, conformational analysis and biological properties of a dicarba derivative of the antimicrobial peptide, brevinin-1BYa. Eur Biophys J (2011) 0.80

Establishing isostructural metal substitution in metalloproteins using 1H NMR, circular dichroism, and Fourier transform infrared spectroscopy. Protein Sci (1995) 0.80

Structure-activity studies of peptides from the "hot-spot" region of human CD2 protein: development of peptides for immunomodulation. J Med Chem (2005) 0.77

Antibody recognition of a human chorionic gonadotropin epitope (hCGbeta66-80) depends on local structure retained in the free peptide. J Biol Chem (2011) 0.77

Cyclic N-terminal loop of amylin forms non amyloid fibers. Biophys J (2013) 0.76

Articles cited by this

Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units. Biopolymers (1968) 6.54

Analysis and prediction of the different types of beta-turn in proteins. J Mol Biol (1988) 4.88

Determination of protein secondary structure in solution by vacuum ultraviolet circular dichroism. J Mol Biol (1980) 3.60

Beta-turns in proteins. J Mol Biol (1977) 3.43

Folding of immunogenic peptide fragments of proteins in water solution. II. The nascent helix. J Mol Biol (1988) 2.33

Folding of immunogenic peptide fragments of proteins in water solution. I. Sequence requirements for the formation of a reverse turn. J Mol Biol (1988) 2.30

Conformation of peptide fragments of proteins in aqueous solution: implications for initiation of protein folding. Biochemistry (1988) 2.21

Convex constraint analysis: a natural deconvolution of circular dichroism curves of proteins. Protein Eng (1991) 1.83

Reverse turns in peptides and proteins. CRC Crit Rev Biochem (1980) 1.57

Circular dichroism studies of distorted alpha-helices, twisted beta-sheets, and beta turns. Biophys Chem (1988) 1.50

A reinvestigation of the mixed carbonic anhydride method of peptide synthesis. J Am Chem Soc (1967) 1.35

Theoretical determination of the CD of proteins containing closely packed antiparallel beta-sheets. Biopolymers (1987) 0.98

Conformational analysis of dipeptides in aqueous solution. II. Molecular structure of glycine and alanine dipeptides by depolarized Rayleigh scattering and laser Raman spectroscopy. Biopolymers (1973) 0.96

Conformations of (X-L-Pro-Y)2 cyclic hexapeptides. Preferred beta-turn conformers and implications for beta turns in proteins. Biochemistry (1981) 0.95

Backbone side chain interactions in peptides. I. Crystal structures of model dipeptides with the Pro-Ser sequence. Int J Pept Protein Res (1984) 0.83

Cooperativity of carbohydrate moiety orientation and beta-turn stability is determined by intramolecular hydrogen bonds in protected glycopeptide models. Biopolymers (1990) 0.81

Conformational characteristics of peptides and unanticipated results from crystal structure analyses. Biopolymers (1989) 0.81

Beta-turns in bridged proline-containing cyclic peptide models. Biopolymers (1987) 0.81

Studies on proline-containing tetrapeptide models of beta-turns. Biopolymers (1985) 0.80

Conformations of cyclo(L-alanyl-L-alanyl-epsilon-aminocaproyl) and of cyclo(L-alanyl-D-alanyl-epsilon-aminocaproyl); cyclized dipeptide models for specific types of beta-bends. Int J Pept Protein Res (1982) 0.80

Conformations of model compounds of proteins. II. Infrared spectra of N-acetyl-amino acid methylamides. Biopolymers (1971) 0.79

Backbone side chain interactions in peptides. II. Solution study of serine-containing model dipeptides. Int J Pept Protein Res (1984) 0.78

Articles by these authors

(truncated to the top 100)

Prediction of the secondary structure of proteins from their amino acid sequence. Adv Enzymol Relat Areas Mol Biol (1978) 29.77

Empirical predictions of protein conformation. Annu Rev Biochem (1978) 25.48

Prediction of protein conformation. Biochemistry (1974) 20.51

Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins. Biochemistry (1974) 12.07

Computed circular dichroism spectra for the evaluation of protein conformation. Biochemistry (1969) 10.58

Beta-turns in proteins. J Mol Biol (1977) 3.43

Prediction of beta-turns. Biophys J (1979) 2.71

Circular dichroism and optical rotatory dispersion of proteins and polypeptides. Methods Enzymol (1973) 2.32

Erythropoietin receptor and interleukin-2 receptor beta chain: a new receptor family. Cell (1989) 2.13

Analysis of the circular dichroism spectrum of proteins using the convex constraint algorithm: a practical guide. Anal Biochem (1992) 2.07

Single-stranded oligomers and polymers of cytidylic and 2'-deoxycytidylic acids: comparative optical rotatory studies. Proc Natl Acad Sci U S A (1967) 1.94

Convex constraint analysis: a natural deconvolution of circular dichroism curves of proteins. Protein Eng (1991) 1.83

Fluorescence studies on heavy meromyosin-substrate interaction. Biochemistry (1972) 1.68

Prediction of the conformation of the histones. Biophys J (1976) 1.54

The circular dichroism of the beta structure of poly-L-lysine. Biochem Biophys Res Commun (1966) 1.48

Circular dichroism of cytosine dinucleoside monophosphates containing arabinose, ribose, and deoxyribose. Biochemistry (1968) 1.46

Conformational studies of the synthetic precursor-specific region of preproparathyroid hormone. Proc Natl Acad Sci U S A (1980) 1.38

Occurrence of phosphorylated residues in predicted beta-turns: implications for beta-turn participation in control mechanisms. Biochem Biophys Res Commun (1977) 1.38

Conformational prediction and circular dichroism studies on the lac repressor. J Mol Biol (1975) 1.36

Conformational changes associated with f-1 histone-deoxyribonucleic acid complexes. Circular dichroism studies. Biochemistry (1970) 1.29

Fluorescence of lysozyme and lysozyme substrate complexes. Separation of tryptophan contributions by fluorescence difference methods. J Biol Chem (1967) 1.26

Circular dichroism of polypeptide and protein conformations. Film studies. Biochemistry (1970) 1.25

The conformation of glucagon: predictions and consequences. Biochemistry (1975) 1.24

Conformation of deoxyribonucleic acid in chromatin: a circular dichroism study. J Mol Biol (1970) 1.21

Comparison of predicted and experimentally determined secondary structure of adenyl kinase. Nature (1974) 1.21

Structural and functional role of leucine residues in proteins. J Mol Biol (1973) 1.21

Conformational dependence of fluorescence polarization spectra of L-tryptophan containing copolypeptides. Biopolymers (1968) 1.20

The T cell response to the glycoprotein D of the herpes simplex virus: the significance of antigen conformation. J Immunol (1985) 1.19

Ultraviolet irradiation effects in poly-L-tyrosine and model compounds. Identification of bityrosine as a photoproduct. Biochemistry (1967) 1.16

Chromatin and nucleosome structure. Nucleic Acids Res (1976) 1.15

Differentiation between transmembrane helices and peripheral helices by the deconvolution of circular dichroism spectra of membrane proteins. Protein Sci (1992) 1.13

Polyriboadenylic and polydeoxyriboadenylic acids. Optical rotatory studies of pH-dependent conformations and their relative stability. Biochemistry (1969) 1.13

The fluorescence of lysozyme and lysozyme substrate complexes. Biochem Biophys Res Commun (1966) 1.13

Optical rotatory dispersion studies on the conformational stabilization forces of yeast soluble ribonucleic acid. J Mol Biol (1965) 1.10

Circular dichroism of polypeptides. Poly(hydroxyethyl-L-glutamine) compared to poly(L-glutamic acid). J Am Chem Soc (1968) 1.09

Conformational studies on copolymers of hydroxypropyl-L-glutamine and L-leucine. Circular dichroism studies. Biochemistry (1972) 1.09

The conformational transitions of uncharged poly-L-lysine. Alpha helix-random coil-beta structure. Biochemistry (1967) 1.09

The use of computed optical rotatory dispersion curves for the evaluation of protein conformation. Biochemistry (1967) 1.05

Electron microscopy and circular dichroism studies on chromatin. Biochemistry (1972) 1.03

Deconvolution of the circular dichroism spectra of proteins: the circular dichroism spectra of the antiparallel beta-sheet in proteins. Proteins (1992) 1.00

The road from poly(alpha-amino acids) to the prediction of protein conformation. Biopolymers (1987) 0.99

Interaction of deoxyribonucleic acid with histone f2b and its half-molecules. Circular dichroism studies. Biochemistry (1974) 0.98

The circular dichroism of polypeptide films. Biochemistry (1968) 0.98

Analysis of chromatin reconstitutiion. Biochemistry (1979) 0.97

Study of conformational states and reversibility of histone complexes. Biochemistry (1981) 0.97

Conformation of the high pH form of chymotrypsin. J Mol Biol (1969) 0.96

Circular dichroism studies of deoxyribonucleic acid complexes with arginine-rich histone IV (f2al). Biochemistry (1971) 0.95

Circular dichroism of valine and formylmethionine transfer RNA from Escherichia coli: effect of aminoacylation. Biochim Biophys Acta (1970) 0.95

CD and Fourier transform ir spectroscopic studies of peptides. II. Detection of beta-turns in linear peptides. Biopolymers (1994) 0.95

Conformational change of chaperone Hsc70 upon binding to a decapeptide: a circular dichroism study. Protein Sci (1993) 0.95

Protein conformational prediction. Trends Biochem Sci (1989) 0.94

Circular dichroism analysis of mononucleosome DNA conformation. Proc Natl Acad Sci U S A (1978) 0.94

The structure of chromatin reconstituted with phosphorylated H1. Circular dichroism and thermal denaturation studies. J Biol Chem (1984) 0.93

The optical rotatory dispersion of the beta structure of poly-L-lysine and poly-L-serine. Biochem Biophys Res Commun (1966) 0.93

The evaluation of type I and type II beta-turn mixtures. Circular dichroism, NMR and molecular dynamics studies. Int J Pept Protein Res (1993) 0.92

The optical rotatory dispersion of two beta structures. Biochem Biophys Res Commun (1967) 0.92

Metal ion-induced conformational changes of phosphorylated fragments of human neurofilament (NF-M) protein. J Mol Biol (1992) 0.92

Peptide models for beta-turns. A circular dichroism study. Int J Pept Protein Res (1984) 0.92

The conformational transition associated with the activation of chymotrypsinogen to chymotrypsin. J Mol Biol (1966) 0.91

Altered conformational effects of phosphorylated lysine-rich histone (f-1) in f-1--deoxyribonucleic acid complexes. Circular dichroism and immunological studies. Biochemistry (1971) 0.91

Conservation of chain reversal regions in proteins. Biophys J (1979) 0.90

Ionic strength-dependent conformational transitions of chromatin. Circular dichroism and thermal denaturation studies. Biopolymers (1979) 0.90

A new hematopoietic growth factor receptor superfamily: structural features and implications for signal transduction. Curr Opin Cell Biol (1990) 0.89

Circular dichroism studies of histone-deoxyribonucleic acid complexes. A comparison of complexes with histone I (f-1), histone IV (f2al), and their mixtures. Biochemistry (1972) 0.89

Sodium butyrate induced structural changes in HeLa cell chromatin. Biochemistry (1982) 0.89

Structural studies of acetylated and control inner core histones. Biochemistry (1987) 0.88

Characterization of beta-turns in cyclic hexapeptides in solution by Fourier transform IR spectroscopy. Biopolymers (1993) 0.87

Kinetics and thermodynamics of the helix leads to transconformation of poly(L-lysine) and L-leucine copolymers. A compensation phenomenon. Biochemistry (1973) 0.87

The single-stranded polyadenylic acid-poly-L-lysine complex. A conformational study and characterization. Biochemistry (1969) 0.85

Conformational studies on poly-L-glutamic acid and copolymers of L-glutamic acid and L-phenylalanine. Biochemistry (1966) 0.85

Ca(2+)-induced conformational transitions of phosphorylated peptides. Biopolymers (1993) 0.85

Dependence of mononucleosome deoxyribonucleic acid conformation on the deoxyribonucleic acid length and H1/H5 content. Circular dichroism and thermal denaturation studies. Biochemistry (1980) 0.85

A poly(ethylene glycol) water-soluble conjugate of porin: refolding to the native state. Biochemistry (1995) 0.85

Complexes of deoxyribonucleic acid with fragments of lysine-rich histone (f-1). Circular dichroism studies. Biochemistry (1971) 0.84

Complexes of deoxyribonucleic acid with lysine-rich (f1) histone phosphorylated at two separate sites: circular dichroism studies. Arch Biochem Biophys (1972) 0.83

Intrinsic tryptophan fluorescence of membranes of GH3 pituitary cells: quenching by thyrotropin-releasing hormone. Biochem Biophys Res Commun (1975) 0.83

Melting of the left-handed helical conformation of charged poly-L-lysine. Biopolymers (1994) 0.83

Thermal denaturation of DNA and DNA:polypeptide complexes. Simultaneous absorption and circular dichroism measurements. Biochem Biophys Res Commun (1974) 0.83

A conformational study of the binding of a high mobility group protein with chromatin. J Biol Chem (1982) 0.83

The beta conformation of polypeptides of valine, isoleucine, and threonine in solution and solid-state: optical and infrared studies. Biopolymers (1975) 0.82

Hydrogen-tritium exchange in polypeptides. Models of alpha-helical and beta conformations. Biochemistry (1974) 0.82

How reverse turns may mediate the formation of helical segments in proteins: an x-ray model. Proc Natl Acad Sci U S A (1992) 0.82

Altered conformational effects of naturally acetylated histone f2al (IV) in f2al-deoxyribonucleic acid complexes. Circular dichroism studies. J Biol Chem (1974) 0.81

The effect of a high mobility group protein (HMG 17) on the structure of acetylated and control core HeLa cell chromatin. Biochim Biophys Acta (1984) 0.81

Beta-turns in bridged proline-containing cyclic peptide models. Biopolymers (1987) 0.81

Cooperativity of carbohydrate moiety orientation and beta-turn stability is determined by intramolecular hydrogen bonds in protected glycopeptide models. Biopolymers (1990) 0.81

Interaction of histone f2al fragments with deoxyribonucleic acid. Circular dichroism and thermal denaturation studies. Biochemistry (1975) 0.81

Chromatin models. The ionic strength dependence of model histone-DNA interactions: circular dichroism studies of lysine-leucine polypeptide-DNA complexes. Biochemistry (1976) 0.80

FT-IR spectroscopy indicates that Ca(2+)-binding to phosphorylated C-terminal fragments of the midsized neurofilament protein subunit results in beta-sheet formation and beta-aggregation. Biochem Biophys Res Commun (1993) 0.80

Fluorescence studies on poly-alpha-amino acids: models of protein conformation. J Biol Chem (1966) 0.80

Biochemical and physiochemical characterization of chromatin fractions with different degrees of solubility isolated from chicken erythrocyte nuclei. Biochemistry (1986) 0.80

Complexes of DNA with histones f2a2 and f3. Circular dichroism studies. Biochemistry (1975) 0.80

High resolution proton magnetic resonance spectroscopy of histones and histone--histone complexes in aqueous solution. Biochemistry (1978) 0.80

Studies on proline-containing tetrapeptide models of beta-turns. Biopolymers (1985) 0.80

Coupling strategies in solid-phase synthesis of glycopeptides. Pept Res (1992) 0.80

Studies on synthetic chromatins containing poly(dA-dT) X poly(dA-dT) and poly(dG-dC) X poly(dG-dC). Biochim Biophys Acta (1983) 0.79

The chain length dependence of the conformation for oligomers of L-lysine in aqueous solution: optical rotatory dispersion studies. Biopolymers (1971) 0.79

Circular dichroism of Escherichia coli ribosomes: effect of heating and metal ions. Biochim Biophys Acta (1970) 0.78

The two beta forms of poly(L-glutamic acid). Biopolymers (1976) 0.78

Phosphorylation loops in synthetic peptides of the human neurofilament protein middle-sized subunit. J Protein Chem (1988) 0.78