PubRank

Peter J Oefner

Author PubWeight™ 124.97‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 CD133(+) and CD133(-) glioblastoma-derived cancer stem cells show differential growth characteristics and molecular profiles. Cancer Res 2007 6.21
2 Dissecting the architecture of a quantitative trait locus in yeast. Nature 2002 5.24
3 Systematic screen for human disease genes in yeast. Nat Genet 2002 4.97
4 The extent of linkage disequilibrium in Arabidopsis thaliana. Nat Genet 2002 4.96
5 The role of selection in the evolution of human mitochondrial genomes. Genetics 2005 4.56
6 A back migration from Asia to sub-Saharan Africa is supported by high-resolution analysis of human Y-chromosome haplotypes. Am J Hum Genet 2002 3.71
7 Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789. Proc Natl Acad Sci U S A 2007 3.52
8 Origin, diffusion, and differentiation of Y-chromosome haplogroups E and J: inferences on the neolithization of Europe and later migratory events in the Mediterranean area. Am J Hum Genet 2004 3.28
9 Excavating Y-chromosome haplotype strata in Anatolia. Hum Genet 2003 3.15
10 Melanesian and Asian origins of Polynesians: mtDNA and Y chromosome gradients across the Pacific. Mol Biol Evol 2006 2.98
11 Phylogeography of Y-chromosome haplogroup I reveals distinct domains of prehistoric gene flow in europe. Am J Hum Genet 2004 2.32
12 Integrative analysis of the mitochondrial proteome in yeast. PLoS Biol 2004 2.31
13 Planning the human variome project: the Spain report. Hum Mutat 2009 2.22
14 Rare, evolutionarily unlikely missense substitutions in ATM confer increased risk of breast cancer. Am J Hum Genet 2009 2.02
15 Transcriptional profiles of CD133+ and CD133- glioblastoma-derived cancer stem cell lines suggest different cells of origin. Cancer Res 2010 1.76
16 Frequentist estimation of coalescence times from nucleotide sequence data using a tree-based partition. Genetics 2002 1.75
17 Sequential elimination of major-effect contributors identifies additional quantitative trait loci conditioning high-temperature growth in yeast. Genetics 2008 1.68
18 Neutrality condition and response law for nonlinear reaction-diffusion equations, with application to population genetics. Phys Rev E Stat Nonlin Soft Matter Phys 2002 1.67
19 Detection of autosomal dominant polycystic kidney disease by NMR spectroscopic fingerprinting of urine. Kidney Int 2011 1.64
20 Validation of microarray-based resequencing of 93 worldwide mitochondrial genomes. Hum Mutat 2009 1.57
21 GLUT1 expression is increased in hepatocellular carcinoma and promotes tumorigenesis. Am J Pathol 2009 1.54
22 Mistargeting of peroxisomal EHHADH and inherited renal Fanconi's syndrome. N Engl J Med 2014 1.53
23 Transformation of follicular lymphoma to diffuse large-cell lymphoma: alternative patterns with increased or decreased expression of c-myc and its regulated genes. Proc Natl Acad Sci U S A 2002 1.49
24 Y-chromosomal evidence of a pastoralist migration through Tanzania to southern Africa. Proc Natl Acad Sci U S A 2008 1.46
25 Rare variants in the ATM gene and risk of breast cancer. Breast Cancer Res 2011 1.36
26 Reduced genetic structure of the Iberian peninsula revealed by Y-chromosome analysis: implications for population demography. Eur J Hum Genet 2004 1.34
27 Contributions of ATM mutations to familial breast and ovarian cancer. Cancer Res 2003 1.28
28 Lactate promotes glioma migration by TGF-beta2-dependent regulation of matrix metalloproteinase-2. Neuro Oncol 2008 1.27
29 Lactic acid and acidification inhibit TNF secretion and glycolysis of human monocytes. J Immunol 2009 1.22
30 Reconstruction of patrilineages and matrilineages of Samaritans and other Israeli populations from Y-chromosome and mitochondrial DNA sequence variation. Hum Mutat 2004 1.19
31 Modeling the temporal interplay of molecular signaling and gene expression by using dynamic nested effects models. Proc Natl Acad Sci U S A 2009 1.17
32 Delaying aging and the aging-associated decline in protein homeostasis by inhibition of tryptophan degradation. Proc Natl Acad Sci U S A 2012 1.14
33 Metabolite extraction from adherently growing mammalian cells for metabolomics studies: optimization of harvesting and extraction protocols. Anal Bioanal Chem 2010 1.12
34 Proteome analysis of mitochondrial outer membrane from Neurospora crassa. Proteomics 2006 1.12
35 State-of-the art data normalization methods improve NMR-based metabolomic analysis. Metabolomics 2011 1.11
36 Genotyping of Snps in a polyploid genome by pyrosequencing. Biotechniques 2002 1.11
37 First-generation SNP/InDel markers tagging loci for pathogen resistance in the potato genome. Plant Biotechnol J 2003 1.09
38 Development of a quantitative, validated capillary electrophoresis-time of flight-mass spectrometry method with integrated high-confidence analyte identification for metabolomics. Electrophoresis 2008 1.07
39 Urinary metabolite quantification employing 2D NMR spectroscopy. Anal Chem 2008 1.06
40 Experimental test of a method for determining causal connectivities of species in reactions. Proc Natl Acad Sci U S A 2003 1.05
41 Down-regulation of methylthioadenosine phosphorylase (MTAP) induces progression of hepatocellular carcinoma via accumulation of 5'-deoxy-5'-methylthioadenosine (MTA). Am J Pathol 2011 1.04
42 Quantitative profiling of tryptophan metabolites in serum, urine, and cell culture supernatants by liquid chromatography-tandem mass spectrometry. Anal Bioanal Chem 2011 1.03
43 Advances in amino acid analysis. Anal Bioanal Chem 2008 1.01
44 DNA mutation detection using denaturing high-performance liquid chromatography (DHPLC). Curr Protoc Hum Genet 2006 0.99
45 Direct and tumor microenvironment mediated influences of 5'-deoxy-5'-(methylthio)adenosine on tumor progression of malignant melanoma. J Cell Biochem 2009 0.99
46 Automated GC-MS analysis of free amino acids in biological fluids. J Chromatogr B Analyt Technol Biomed Life Sci 2008 0.98
47 Conservation of the class I beta-tubulin gene in human populations and lack of mutations in lung cancers and paclitaxel-resistant ovarian cancers. Mol Cancer Ther 2002 0.97
48 Urinary amino acid analysis: a comparison of iTRAQ-LC-MS/MS, GC-MS, and amino acid analyzer. J Chromatogr B Analyt Technol Biomed Life Sci 2009 0.97
49 NMR metabolomic analysis of dairy cows reveals milk glycerophosphocholine to phosphocholine ratio as prognostic biomarker for risk of ketosis. J Proteome Res 2011 0.92
50 Tryptophan catabolism is associated with acute GVHD after human allogeneic stem cell transplantation and indicates activation of indoleamine 2,3-dioxygenase. Blood 2011 0.91
51 Younger birth cohort correlates with higher breast and ovarian cancer risk in European BRCA1 mutation carriers. Hum Mutat 2005 0.90
52 Deficient tryptophan catabolism along the kynurenine pathway reveals that the epididymis is in a unique tolerogenic state. J Biol Chem 2010 0.89
53 Reduced expression of fibroblast growth factor receptor 2IIIb in hepatocellular carcinoma induces a more aggressive growth. Am J Pathol 2010 0.88
54 Characterization of the breast cancer associated ATM 7271T>G (V2424G) mutation by gene expression profiling. Genes Chromosomes Cancer 2006 0.86
55 Identifying new candidate genes for hereditary facial paresis on chromosome 3q21-q22 by RNA in situ hybridization in mouse. Genomics 2005 0.86
56 ReseqChip: automated integration of multiple local context probe data from the MitoChip array in mitochondrial DNA sequence assembly. BMC Bioinformatics 2009 0.86
57 Polymerase chain reaction fidelity and denaturing high-performance liquid chromatography. J Chromatogr B Analyt Technol Biomed Life Sci 2002 0.86
58 Comparison of serum versus plasma collection in gas chromatography--mass spectrometry-based metabolomics. Electrophoresis 2010 0.86
59 Quantitative analysis of 5'-deoxy-5'-methylthioadenosine in melanoma cells by liquid chromatography-stable isotope ratio tandem mass spectrometry. J Chromatogr B Analyt Technol Biomed Life Sci 2008 0.84
60 Integrative normalization and comparative analysis for metabolic fingerprinting by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Anal Chem 2009 0.84
61 Capillary array high-performance liquid chromatography of nucleic acids and proteins. Anal Chem 2002 0.84
62 Applicability of tandem mass spectrometry to the automated comparative sequencing of long-chain oligonucleotides. J Am Soc Mass Spectrom 2004 0.84
63 Comprehensive two-dimensional gas chromatography in metabolomics. Anal Bioanal Chem 2012 0.83
64 Amino acid analysis in physiological samples by GC-MS with propyl chloroformate derivatization and iTRAQ-LC-MS/MS. Methods Mol Biol 2012 0.83
65 Performance evaluation of algorithms for the classification of metabolic 1H NMR fingerprints. J Proteome Res 2012 0.82
66 Quantification of intermediates of the methionine and polyamine metabolism by liquid chromatography-tandem mass spectrometry in cultured tumor cells and liver biopsies. J Chromatogr A 2010 0.82
67 Optimized suppression of adducts in polymerase chain reaction products for semi-quantitative SNP genotyping by liquid chromatography-mass spectrometry. J Am Soc Mass Spectrom 2004 0.81
68 Diclofenac inhibits lactate formation and efficiently counteracts local immune suppression in a murine glioma model. Int J Cancer 2012 0.81
69 Early changes in the liver-soluble proteome from mice fed a nonalcoholic steatohepatitis inducing diet. Proteomics 2012 0.81
70 Mutation scanning by ion-pair reversed-phase high-performance liquid chromatography-electrospray ionization mass spectrometry (ICEMS). Hum Mutat 2003 0.80
71 Improved enantiomer resolution and quantification of free D-amino acids in serum and urine by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. J Chromatogr A 2011 0.80
72 Comparison of derivatization and chromatographic methods for GC-MS analysis of amino acid enantiomers in physiological samples. J Chromatogr B Analyt Technol Biomed Life Sci 2010 0.79
73 Re: genetic analysis of the beta-tubulin gene, TUBB, in non-small-cell lung cancer. J Natl Cancer Inst 2002 0.79
74 Distinct metabolic differences between various human cancer and primary cells. Electrophoresis 2013 0.79
75 New aspects of an old drug--diclofenac targets MYC and glucose metabolism in tumor cells. PLoS One 2013 0.79
76 Conservation of the RB1 gene in human and primates. Hum Mutat 2005 0.79
77 Population genetic implications from DNA polymorphism in random human genomic sequences. Hum Mutat 2002 0.79
78 Expression and function of methylthioadenosine phosphorylase in chronic liver disease. PLoS One 2013 0.78
79 Denaturing high-performance liquid chromatography. Methods Mol Biol 2003 0.78
80 MetaboQuant: a tool combining individual peak calibration and outlier detection for accurate metabolite quantification in 1D (1)H and (1)H-(13)C HSQC NMR spectra. Biotechniques 2013 0.78
81 Mutation of the ATM gene is not involved in the pathogenesis of either follicle center lymphoma or its transformation to higher-grade lymphoma. Leuk Lymphoma 2002 0.78
82 Analysis of FAS (CD95) gene mutations in higher-grade transformation of follicle center lymphoma. Leuk Lymphoma 2003 0.77
83 Glucocorticoid-induced alterations in mitochondrial membrane properties and respiration in childhood acute lymphoblastic leukemia. Biochim Biophys Acta 2011 0.77
84 N-cadherin promoter polymorphisms and risk of osteoarthritis. FASEB J 2013 0.77
85 Comparison of two algorithmic data processing strategies for metabolic fingerprinting by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. J Chromatogr A 2011 0.77
86 Continuous water infusion enhances atmospheric pressure chemical ionization of methyl chloroformate derivatives in gas chromatography coupled to time-of-flight mass spectrometry-based metabolomics. Anal Chem 2014 0.77
87 Metabolic fingerprinting using comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Methods Mol Biol 2012 0.77
88 Correlations between milk and plasma levels of amino and carboxylic acids in dairy cows. J Proteome Res 2013 0.77
89 Multiplex analysis of single-nucleotide extension products on a 16-capillary, denaturing, high-performance liquid chromatography array. Genomics 2002 0.75
90 Performance evaluation of gas chromatography-atmospheric pressure chemical ionization-time-of-flight mass spectrometry for metabolic fingerprinting and profiling. Anal Chem 2011 0.75
91 Genotyping African haplotypes in ATM using a co-spotted single-base extension assay. Hum Mutat 2003 0.75
92 Enhanced metabolite profiling using a redesigned atmospheric pressure chemical ionization source for gas chromatography coupled to high-resolution time-of-flight mass spectrometry. Anal Bioanal Chem 2015 0.75
93 Comprehensive Metaboproteomics of Burkitt's and Diffuse Large B-Cell Lymphoma Cell Lines and Primary Tumor Tissues Reveals Distinct Differences in Pyruvate Content and Metabolism. J Proteome Res 2017 0.75
94 Capillary electrophoresis and column chromatography in biomedical chiral amino acid analysis. Anal Bioanal Chem 2009 0.75
95 Allelic loss analysis by denaturing high-performance liquid chromatography and electrospray ionization mass spectrometry. Hum Mutat 2007 0.75
96 Hyphenated mass spectrometry in the analysis of the central carbon metabolism. Anal Bioanal Chem 2008 0.75
97 Scale-invariant biomarker discovery in urine and plasma metabolite fingerprints. J Proteome Res 2017 0.75