Identification of Birds through DNA Barcodes.

DNA barcoding Australia's fish species. Philos Trans R Soc Lond B Biol Sci (2005) 11.37

DNA barcodes distinguish species of tropical Lepidoptera. Proc Natl Acad Sci U S A (2006) 10.35

Use of DNA barcodes to identify flowering plants. Proc Natl Acad Sci U S A (2005) 8.98

DNA barcoding: error rates based on comprehensive sampling. PLoS Biol (2005) 7.81

Critical factors for assembling a high volume of DNA barcodes. Philos Trans R Soc Lond B Biol Sci (2005) 7.13

A two-locus global DNA barcode for land plants: the coding rbcL gene complements the non-coding trnH-psbA spacer region. PLoS One (2007) 6.36

DNA barcodes reveal cryptic host-specificity within the presumed polyphagous members of a genus of parasitoid flies (Diptera: Tachinidae). Proc Natl Acad Sci U S A (2006) 6.23

Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding. Nucleic Acids Res (2006) 5.31

DNA barcoding: promise and pitfalls. PLoS Biol (2004) 5.20

DNA barcoding for effective biodiversity assessment of a hyperdiverse arthropod group: the ants of Madagascar. Philos Trans R Soc Lond B Biol Sci (2005) 4.84

DNA barcodes affirm that 16 species of apparently generalist tropical parasitoid flies (Diptera, Tachinidae) are not all generalists. Proc Natl Acad Sci U S A (2007) 4.43

The unholy trinity: taxonomy, species delimitation and DNA barcoding. Philos Trans R Soc Lond B Biol Sci (2005) 4.35

Problems with mitochondrial DNA as a marker in population, phylogeographic and phylogenetic studies: the effects of inherited symbionts. Proc Biol Sci (2005) 4.16

Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified. Proc Natl Acad Sci U S A (2008) 3.56

Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians. Front Zool (2005) 3.23

A universal DNA mini-barcode for biodiversity analysis. BMC Genomics (2008) 3.16

Does the DNA barcoding gap exist? - a case study in blue butterflies (Lepidoptera: Lycaenidae). Front Zool (2007) 3.08

Deciphering amphibian diversity through DNA barcoding: chances and challenges. Philos Trans R Soc Lond B Biol Sci (2005) 2.57

Identifying Canadian freshwater fishes through DNA barcodes. PLoS One (2008) 2.49

Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case. Proc Natl Acad Sci U S A (2007) 2.41

DNA barcoding in the cycadales: testing the potential of proposed barcoding markers for species identification of cycads. PLoS One (2007) 2.38

Mitochondrial cox1 sequence data reliably uncover patterns of insect diversity but suffer from high lineage-idiosyncratic error rates. PLoS One (2010) 2.38

Estimating diversity of Indo-Pacific coral reef stomatopods through DNA barcoding of stomatopod larvae. Proc Biol Sci (2006) 2.33

The effect of geographical scale of sampling on DNA barcoding. Syst Biol (2012) 2.22

Phylogenetic diversity (PD) and biodiversity conservation: some bioinformatics challenges. Evol Bioinform Online (2007) 2.06

Underestimation of species richness in neotropical frogs revealed by mtDNA analyses. PLoS One (2007) 1.99

Limited performance of DNA barcoding in a diverse community of tropical butterflies. Proc Biol Sci (2007) 1.96

DNA-based species delineation in tropical beetles using mitochondrial and nuclear markers. Philos Trans R Soc Lond B Biol Sci (2005) 1.93

Comparative performances of DNA barcoding across insect orders. BMC Bioinformatics (2010) 1.86

A likelihood ratio test for species membership based on DNA sequence data. Philos Trans R Soc Lond B Biol Sci (2005) 1.85

Character-based DNA barcoding allows discrimination of genera, species and populations in Odonata. Proc Biol Sci (2008) 1.85

Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring. BMC Biol (2007) 1.80

DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae). Proc Biol Sci (2007) 1.76

An evaluation of LSU rDNA D1-D2 sequences for their use in species identification. Front Zool (2007) 1.75

Slow mitochondrial COI sequence evolution at the base of the metazoan tree and its implications for DNA barcoding. J Mol Evol (2008) 1.75

Identification of Amazonian trees with DNA barcodes. PLoS One (2009) 1.75

Barcoding nemo: DNA-based identifications for the ornamental fish trade. PLoS One (2009) 1.71

Complete DNA barcode reference library for a country's butterfly fauna reveals high performance for temperate Europe. Proc Biol Sci (2010) 1.71

DNA barcoding detects contamination and substitution in North American herbal products. BMC Med (2013) 1.70

Probing evolutionary patterns in neotropical birds through DNA barcodes. PLoS One (2009) 1.61

Single mitochondrial gene barcodes reliably identify sister-species in diverse clades of birds. BMC Evol Biol (2008) 1.61

jMOTU and Taxonerator: turning DNA Barcode sequences into annotated operational taxonomic units. PLoS One (2011) 1.56

Evolution of modern birds revealed by mitogenomics: timing the radiation and origin of major orders. Mol Biol Evol (2011) 1.55

DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. Mol Ecol Resour (2011) 1.55

The current status of species recognition and identification in Aspergillus. Stud Mycol (2007) 1.55

Integrated taxonomy: traditional approach and DNA barcoding for the identification of filarioid worms and related parasites (Nematoda). Front Zool (2009) 1.54

The real maccoyii: identifying tuna sushi with DNA barcodes--contrasting characteristic attributes and genetic distances. PLoS One (2009) 1.52

Assessment of four DNA fragments (COI, 16S rDNA, ITS2, 12S rDNA) for species identification of the Ixodida (Acari: Ixodida). Parasit Vectors (2014) 1.51

Molecular species identification of Central European ground beetles (Coleoptera: Carabidae) using nuclear rDNA expansion segments and DNA barcodes. Front Zool (2010) 1.50

The chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data. PLoS One (2012) 1.50

A tri-oceanic perspective: DNA barcoding reveals geographic structure and cryptic diversity in Canadian polychaetes. PLoS One (2011) 1.48

The role of DNA barcodes in understanding and conservation of mammal diversity in southeast Asia. PLoS One (2010) 1.45

Commercial teas highlight plant DNA barcode identification successes and obstacles. Sci Rep (2011) 1.42

DNA BARCODING IN LAND PLANTS: DEVELOPING STANDARDS TO QUANTIFY AND MAXIMIZE SUCCESS. Taxon (2008) 1.42

Barcoding beetles: a regional survey of 1872 species reveals high identification success and unusually deep interspecific divergences. PLoS One (2014) 1.37

Evolution and biodiversity of Antarctic organisms: a molecular perspective. Philos Trans R Soc Lond B Biol Sci (2007) 1.34

Molecular approach to the identification of fish in the South China Sea. PLoS One (2012) 1.32

The problems and promise of DNA barcodes for species diagnosis of primate biomaterials. Philos Trans R Soc Lond B Biol Sci (2005) 1.32

Species delimitation and phylogeography of Aphonopelma hentzi (Araneae, Mygalomorphae, Theraphosidae): cryptic diversity in North American tarantulas. PLoS One (2011) 1.28

Beyond barcodes: complex DNA taxonomy of a South Pacific Island radiation. Proc Biol Sci (2006) 1.28

Neotropical bats: estimating species diversity with DNA barcodes. PLoS One (2011) 1.28

DNA barcoding of the Lemnaceae, a family of aquatic monocots. BMC Plant Biol (2010) 1.27

Learning to classify species with barcodes. BMC Bioinformatics (2009) 1.27

Description of a new relict eriophyoid mite, Loboquintus subsquamatus n. gen. & n. sp. (Eriophyoidea, Phytoptidae, Pentasetacini) based on confocal microscopy, SEM, COI barcoding and novel CLSM anatomy of internal genitalia. Exp Appl Acarol (2013) 1.26

Identifying insects with incomplete DNA barcode libraries, African fruit flies (Diptera: Tephritidae) as a test case. PLoS One (2012) 1.24

Using population genetic theory and DNA sequences for species detection and identification in asexual organisms. PLoS One (2010) 1.20

Identifying the main mosquito species in China based on DNA barcoding. PLoS One (2012) 1.19

Wide-ranging barcoding aids discovery of one-third increase of species richness in presumably well-investigated moths. Sci Rep (2013) 1.19

High-level diversity of dinoflagellates in the natural environment, revealed by assessment of mitochondrial cox1 and cob genes for dinoflagellate DNA barcoding. Appl Environ Microbiol (2008) 1.17

Molecular identification of birds: performance of distance-based DNA barcoding in three genes to delimit parapatric species. PLoS One (2009) 1.17

Rapid DNA barcoding analysis of large datasets using the composition vector method. BMC Bioinformatics (2009) 1.15

Where taxonomy based on subtle morphological differences is perfectly mirrored by huge genetic distances: DNA barcoding in Protura (Hexapoda). PLoS One (2014) 1.14

Reconstructing mammalian phylogenies: a detailed comparison of the cytochrome B and cytochrome oxidase subunit I mitochondrial genes. PLoS One (2010) 1.14

Is it easy to be urban? Convergent success in urban habitats among lineages of a widespread native ant. PLoS One (2010) 1.13

Mating trials validate the use of DNA barcoding to reveal cryptic speciation of a marine bryozoan taxon. Proc Biol Sci (2007) 1.13

Systematic and evolutionary insights derived from mtDNA COI barcode diversity in the Decapoda (Crustacea: Malacostraca). PLoS One (2011) 1.12

New metrics for comparison of taxonomies reveal striking discrepancies among species delimitation methods in Madascincus lizards. PLoS One (2013) 1.12

A suspected parasite spill-back of two novel Myxidium spp. (Myxosporea) causing disease in Australian endemic frogs found in the invasive Cane toad. PLoS One (2011) 1.12

First large-scale DNA barcoding assessment of reptiles in the biodiversity hotspot of Madagascar, based on newly designed COI primers. PLoS One (2012) 1.11

Phylogeography of the Alcippe morrisonia (Aves: Timaliidae): long population history beyond late Pleistocene glaciations. BMC Evol Biol (2009) 1.10

Phylogenetic reconstruction and DNA barcoding for closely related pine moth species (Dendrolimus) in China with multiple gene markers. PLoS One (2012) 1.10

Spider mite (Acari: Tetranychidae) mitochondrial COI phylogeny reviewed: host plant relationships, phylogeography, reproductive parasites and barcoding. Exp Appl Acarol (2007) 1.10

Filling the gap - COI barcode resolution in eastern Palearctic birds. Front Zool (2009) 1.09

Barcoding against a paradox? Combined molecular species delineations reveal multiple cryptic lineages in elusive meiofaunal sea slugs. BMC Evol Biol (2012) 1.09

Cryptic speciation in Brazilian Epiperipatus (Onychophora: Peripatidae) reveals an underestimated diversity among the peripatid velvet worms. PLoS One (2011) 1.07

Patterns of DNA barcode variation in Canadian marine molluscs. PLoS One (2014) 1.07

Assessing the effect of varying sequence length on DNA barcoding of fungi. Mol Ecol Notes (2007) 1.06

DNA barcoding: a new tool for palm taxonomists? Ann Bot (2011) 1.05

Phylogenetic relationships in Demodex mites (Acari: Demodicidae) based on mitochondrial 16S rDNA partial sequences. Parasitol Res (2012) 1.05

Introduction. Speciation in plants and animals: pattern and process. Philos Trans R Soc Lond B Biol Sci (2008) 1.05

Evolving entities: towards a unified framework for understanding diversity at the species and higher levels. Philos Trans R Soc Lond B Biol Sci (2010) 1.04

iBarcode.org: web-based molecular biodiversity analysis. BMC Bioinformatics (2009) 1.04

Integrated operational taxonomic units (IOTUs) in echolocating bats: a bridge between molecular and traditional taxonomy. PLoS One (2012) 1.04

DNA barcoding reveals cryptic diversity within commercially exploited Indo-Malay Carangidae (Teleosteii: Perciformes). PLoS One (2012) 1.03

Potential efficacy of mitochondrial genes for animal DNA barcoding: a case study using eutherian mammals. BMC Genomics (2011) 1.03

Ancient geographical gaps and paleo-climate shape the phylogeography of an endemic bird in the sky islands of southern India. PLoS One (2010) 1.03

Molecular characterization of freshwater snails in the genus Bulinus: a role for barcodes? Parasit Vectors (2008) 1.02

Comparing the usefulness of distance, monophyly and character-based DNA barcoding methods in species identification: a case study of neogastropoda. PLoS One (2011) 1.02

The effectiveness of three regions in mitochondrial genome for aphid DNA barcoding: a case in Lachininae. PLoS One (2012) 1.00

Identifying the species-origin of faecal droppings used for avian influenza virus surveillance in wild-birds. J Clin Virol (2009) 1.00

The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol (1987) 266.90

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol (1980) 113.75

Biological identifications through DNA barcodes. Proc Biol Sci (2003) 54.14

Phylogenetic structure of the prokaryotic domain: the primary kingdoms. Proc Natl Acad Sci U S A (1977) 26.08

Rapid evolution of animal mitochondrial DNA. Proc Natl Acad Sci U S A (1979) 22.76

Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc Biol Sci (2003) 19.42

Mitochondrial pseudogenes: evolution's misplaced witnesses. Trends Ecol Evol (2001) 7.83

Species realities and numbers in sexual vertebrates: perspectives from an asexually transmitted genome. Proc Natl Acad Sci U S A (1999) 6.49

The promise of a DNA taxonomy. Philos Trans R Soc Lond B Biol Sci (2004) 5.51

Now is the time. Philos Trans R Soc Lond B Biol Sci (2004) 4.66

Pleistocene phylogeographic effects on avian populations and the speciation process. Proc Biol Sci (1998) 4.26

A comparative summary of genetic distances in the vertebrates from the mitochondrial cytochrome b gene. Mol Biol Evol (1998) 4.21

Interpreting the universal phylogenetic tree. Proc Natl Acad Sci U S A (2000) 4.09

Phylogeny estimation: traditional and Bayesian approaches. Nat Rev Genet (2003) 2.82

Unreliable mtDNA data due to nuclear insertions: a cautionary tale from analysis of humans and other great apes. Mol Ecol (2004) 2.18

Identification of mosquito avian-derived blood meals by polymerase chain reaction-heteroduplex analysis. Am J Trop Med Hyg (2002) 2.16

Cryptic genetic variation and paraphyly in ravens. Proc Biol Sci (2000) 1.83

Species identification using genetic tools: the value of nuclear and mitochondrial gene sequences in whale conservation. J Hered (1998) 1.76

Genetic evidence for the effect of a postglacial population expansion on the phylogeography of a North American songbird. Proc Biol Sci (2000) 1.66

Low number of mitochondrial pseudogenes in the chicken (Gallus gallus) nuclear genome: implications for molecular inference of population history and phylogenetics. BMC Evol Biol (2004) 1.57

Multiplex PCR assay for malaria vector Anopheles minimus and four related species in the Myzomyia Series from Southeast Asia. Med Vet Entomol (2003) 1.45

Quantifying mosquito biting patterns on humans by DNA fingerprinting of bloodmeals. Am J Trop Med Hyg (2001) 1.44

Genetic differentiation at nuclear and mitochondrial loci among large white-headed gulls: sex-biased interspecific gene flow? Evolution (2003) 1.25

Molecular phylogeny of a cosmopolitan group of woodpeckers (genus Picoides) gased on COI and cyt b mitochondrial gene sequences. Mol Phylogenet Evol (2002) 1.19

Forensic application of repetitive DNA markers to the species identification of animal tissues. J Forensic Sci (1994) 1.14

DNA barcoding Australia's fish species. Philos Trans R Soc Lond B Biol Sci (2005) 11.37

The influence of climate on the timing and rate of spring bird migration. Oecologia (2004) 2.98

Comprehensive DNA barcode coverage of North American birds. Mol Ecol Notes (2007) 2.64

Barcoding nemo: DNA-based identifications for the ornamental fish trade. PLoS One (2009) 1.71

Risk maps for range expansion of the Lyme disease vector, Ixodes scapularis, in Canada now and with climate change. Int J Health Geogr (2008) 1.67

Molecular species identification of Central European ground beetles (Coleoptera: Carabidae) using nuclear rDNA expansion segments and DNA barcodes. Front Zool (2010) 1.50

Project description: DNA barcodes of bird species in the national museum of natural history, smithsonian institution, USA. Zookeys (2011) 1.17

Climate control on ancestral population dynamics: insight from Patagonian fish phylogeography. Mol Ecol (2008) 1.15

Molecular phylogenetic reconstructions identify East Asia as the cradle for the evolution of the cosmopolitan genus Myotis (Mammalia, Chiroptera). Mol Phylogenet Evol (2013) 1.13

Potential use of DNA barcodes in regulatory science: applications of the Regulatory Fish Encyclopedia. J Food Prot (2008) 1.09

Structural analysis of biodiversity. PLoS One (2010) 1.00

A scalable method for analysis and display of DNA sequences. PLoS One (2009) 0.97

Molecular phylogeny of hipposiderid bats from Southeast Asia and evidence of cryptic diversity. Mol Phylogenet Evol (2011) 0.94

Permanent genetic resources added to Molecular Ecology Resources Database 1 December 2011-31 January 2012. Mol Ecol Resour (2012) 0.82

Generation of a hematologic malignancy-selective membranolytic peptide from the antimicrobial core (RRWQWR) of bovine lactoferricin. Exp Mol Pathol (2013) 0.81

DNA barcoding birds: from field collection to data analysis. Methods Mol Biol (2012) 0.78

The evolutionary diversification of the Centropagidae (Crustacea, Calanoida): A history of habitat shifts. Mol Phylogenet Evol (2009) 0.76