Published in Proteomics on December 01, 2004
Miro1 is a calcium sensor for glutamate receptor-dependent localization of mitochondria at synapses. Neuron (2009) 3.49
IQGAPs in cancer: a family of scaffold proteins underlying tumorigenesis. FEBS Lett (2009) 2.35
IQGAP1 is a scaffold for mitogen-activated protein kinase signaling. Mol Cell Biol (2005) 2.16
Identification of a novel, widespread, and functionally important PCNA-binding motif. J Cell Biol (2009) 1.63
Development of a novel cross-linking strategy for fast and accurate identification of cross-linked peptides of protein complexes. Mol Cell Proteomics (2010) 1.61
Identification of protein-protein interactions and topologies in living cells with chemical cross-linking and mass spectrometry. Mol Cell Proteomics (2008) 1.58
Measuring the energetics of membrane protein dimerization in mammalian membranes. J Am Chem Soc (2010) 1.45
Association of hepatitis C virus replication complexes with microtubules and actin filaments is dependent on the interaction of NS3 and NS5A. J Virol (2008) 1.43
Protein extraction of formalin-fixed, paraffin-embedded tissue enables robust proteomic profiles by mass spectrometry. J Histochem Cytochem (2009) 1.30
Optimization of formaldehyde cross-linking for protein interaction analysis of non-tagged integrin beta1. J Biomed Biotechnol (2010) 1.27
Mapping the local protein interactome of the NuA3 histone acetyltransferase. Protein Sci (2009) 1.25
Revealing novel telomere proteins using in vivo cross-linking, tandem affinity purification, and label-free quantitative LC-FTICR-MS. Mol Cell Proteomics (2010) 1.22
A new in vivo cross-linking mass spectrometry platform to define protein-protein interactions in living cells. Mol Cell Proteomics (2014) 1.18
Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking. Proc Natl Acad Sci U S A (2007) 1.17
A new cross-linking strategy: protein interaction reporter (PIR) technology for protein-protein interaction studies. Mol Biosyst (2010) 1.14
Profiling of protein interaction networks of protein complexes using affinity purification and quantitative mass spectrometry. Mol Cell Proteomics (2010) 1.13
Diversity in genetic in vivo methods for protein-protein interaction studies: from the yeast two-hybrid system to the mammalian split-luciferase system. Microbiol Mol Biol Rev (2012) 1.11
Identification of Wilms' tumor 1-associating protein complex and its role in alternative splicing and the cell cycle. J Biol Chem (2013) 1.11
In vivo identification of the outer membrane protein OmcA-MtrC interaction network in Shewanella oneidensis MR-1 cells using novel hydrophobic chemical cross-linkers. J Proteome Res (2008) 1.10
CLPM: a cross-linked peptide mapping algorithm for mass spectrometric analysis. BMC Bioinformatics (2005) 1.08
Proteomic identification of sorting nexin 6 as a negative regulator of BACE1-mediated APP processing. FASEB J (2010) 1.06
In vivo protein complex topologies: sights through a cross-linking lens. Proteomics (2012) 1.04
Integrating mass spectrometry of intact protein complexes into structural proteomics. Proteomics (2012) 1.04
Probing the protein interaction network of Pseudomonas aeruginosa cells by chemical cross-linking mass spectrometry. Structure (2015) 1.03
Selective enrichment and identification of azide-tagged cross-linked peptides using chemical ligation and mass spectrometry. J Am Soc Mass Spectrom (2010) 1.01
BclAF1 restriction factor is neutralized by proteasomal degradation and microRNA repression during human cytomegalovirus infection. Proc Natl Acad Sci U S A (2012) 1.01
Elucidating the higher-order structure of biopolymers by structural probing and mass spectrometry: MS3D. J Mass Spectrom (2010) 1.00
Production of plasma membrane vesicles with chloride salts and their utility as a cell membrane mimetic for biophysical characterization of membrane protein interactions. Anal Chem (2012) 0.99
Analysis of HmsH and its role in plague biofilm formation. Microbiology (2010) 0.98
The biology of IQGAP proteins: beyond the cytoskeleton. EMBO Rep (2015) 0.97
Characterization of the physiological turnover of native and inactivated cytochromes P450 3A in cultured rat hepatocytes: a role for the cytosolic AAA ATPase p97? Biochemistry (2007) 0.96
IQGAP Family Members in Yeast, Dictyostelium, and Mammalian Cells. Int J Cell Biol (2012) 0.95
Affinity purification strategy to capture human endogenous proteasome complexes diversity and to identify proteasome-interacting proteins. Mol Cell Proteomics (2009) 0.94
Formaldehyde Crosslinking: A Tool for the Study of Chromatin Complexes. J Biol Chem (2015) 0.94
Oxygen supply from the bird's eye perspective: globin E is a respiratory protein in the chicken retina. J Biol Chem (2011) 0.89
Applications of mass spectrometry for quantitative protein analysis in formalin-fixed paraffin-embedded tissues. Proteomics (2014) 0.89
Investigation of stable and transient protein-protein interactions: Past, present, and future. Proteomics (2013) 0.88
Plant protein-protein interaction network and interactome. Curr Genomics (2010) 0.88
IQGAP1 binds to estrogen receptor-α and modulates its function. J Biol Chem (2014) 0.86
Exploring DNA-binding proteins with in vivo chemical cross-linking and mass spectrometry. J Proteome Res (2009) 0.85
Identification of protein interactions involved in cellular signaling. Mol Cell Proteomics (2013) 0.84
Maturation of the cytochrome cd1 nitrite reductase NirS from Pseudomonas aeruginosa requires transient interactions between the three proteins NirS, NirN and NirF. Biosci Rep (2013) 0.83
The forkhead transcription factor Hcm1 promotes mitochondrial biogenesis and stress resistance in yeast. J Biol Chem (2010) 0.82
IQGAP1 is a key node within the small GTPase network. Small GTPases (2013) 0.82
Merging molecular electron microscopy and mass spectrometry by carbon film-assisted endoproteinase digestion. Mol Cell Proteomics (2010) 0.82
KRAS Engages AGO2 to Enhance Cellular Transformation. Cell Rep (2016) 0.79
Global Membrane Protein Interactome Analysis using In vivo Crosslinking and Mass Spectrometry-based Protein Correlation Profiling. Mol Cell Proteomics (2016) 0.78
Chemical crosslinkers enhance detection of receptor interactomes. Front Pharmacol (2014) 0.77
An in vivo crosslinking approach to isolate protein complexes from Drosophila embryos. J Vis Exp (2014) 0.77
Approaches for assessing and discovering protein interactions in cancer. Mol Cancer Res (2013) 0.76
Protein Cross-Linking Capillary Electrophoresis for Protein-Protein Interaction Analysis. Anal Chem (2016) 0.75
Illuminating Spatial and Temporal Organization of Protein Interaction Networks by Mass Spectrometry-Based Proteomics. Front Genet (2015) 0.75
Retrograde regulation of STIM1-Orai1 interaction and store-operated Ca2+ entry by calsequestrin. Sci Rep (2015) 0.75
Fast fixing and comprehensive identification to help improve real-time ligands discovery based on formaldehyde crosslinking, immunoprecipitation and SDS-PAGE separation. Proteome Sci (2014) 0.75
Mapping protein surface accessibility via an electron transfer dissociation selectively cleavable hydrazone probe. Mol Cell Proteomics (2012) 0.75
PDZD7-MYO7A complex identified in enriched stereocilia membranes. Elife (2016) 0.75
Making connections for life: an in vivo map of the yeast interactome. HFSP J (2008) 0.75
Galectin-3 is a non-classic RNA binding protein that stabilizes the mucin MUC4 mRNA in the cytoplasm of cancer cells. Sci Rep (2017) 0.75
An HIV-1 Env-Antibody Complex Focuses Antibody Responses to Conserved Neutralizing Epitopes. J Immunol (2016) 0.75
Monoclonal antibodies against the propeptide of endopeptidase AlpB of Lysobacter sp. XL1 for studying AlpB-protein interactions in bacterial cells. Dokl Biochem Biophys (2012) 0.75
CIP2A inhibits PP2A in human malignancies. Cell (2007) 5.28
p63 deficiency activates a program of cellular senescence and leads to accelerated aging. Genes Dev (2005) 3.02
Deconstruction of the SS18-SSX fusion oncoprotein complex: insights into disease etiology and therapeutics. Cancer Cell (2012) 1.99
Comprehensive proteomic analysis of protein changes during platelet storage requires complementary proteomic approaches. Transfusion (2007) 1.95
Utility of formaldehyde cross-linking and mass spectrometry in the study of protein-protein interactions. J Mass Spectrom (2008) 1.77
ΔNp63α is an oncogene that targets chromatin remodeler Lsh to drive skin stem cell proliferation and tumorigenesis. Cell Stem Cell (2011) 1.75
Towards patient-based cancer therapeutics. Nat Biotechnol (2010) 1.63
Ras and relatives--job sharing and networking keep an old family together. Exp Hematol (2002) 1.59
RS1, a discoidin domain-containing retinal cell adhesion protein associated with X-linked retinoschisis, exists as a novel disulfide-linked octamer. J Biol Chem (2005) 1.52
p63 heterozygous mutant mice are not prone to spontaneous or chemically induced tumors. Proc Natl Acad Sci U S A (2006) 1.48
Single-step Strep-tag purification for the isolation and identification of protein complexes from mammalian cells. Proteomics (2005) 1.45
Optimization of formaldehyde cross-linking for protein interaction analysis of non-tagged integrin beta1. J Biomed Biotechnol (2010) 1.27
PME-1 protects extracellular signal-regulated kinase pathway activity from protein phosphatase 2A-mediated inactivation in human malignant glioma. Cancer Res (2009) 1.27
Mass spectrometric identification of formaldehyde-induced peptide modifications under in vivo protein cross-linking conditions. Anal Chim Acta (2008) 1.22
A proteolytic fragment of Mcl-1 exhibits nuclear localization and regulates cell growth by interaction with Cdk1. Biochem J (2005) 1.12
A carboxy-terminal affinity tag for the purification and mass spectrometric characterization of integral membrane proteins. J Proteome Res (2009) 0.95
Implementation of a data repository-driven approach for targeted proteomics experiments by multiple reaction monitoring. J Proteomics (2008) 0.94
Current approaches for global post-translational modification discovery and mass spectrometric analysis. Anal Chim Acta (2008) 0.92
Mass spectrometry-based proteomics in biomedical research: emerging technologies and future strategies. Expert Rev Mol Med (2010) 0.91
Mass spectrometric characterization of lipid-modified peptides for the analysis of acylated proteins. J Mass Spectrom (2006) 0.89
A compartmentalized phosphorylation/dephosphorylation system that regulates U snRNA export from the nucleus. Mol Cell Biol (2007) 0.89
Identification of nitroxyl-induced modifications in human platelet proteins using a novel mass spectrometric detection method. Mol Cell Proteomics (2008) 0.89
Advancing formaldehyde cross-linking towards quantitative proteomic applications. Anal Bioanal Chem (2012) 0.88
A signaling pathway contributing to platelet storage lesion development: targeting PI3-kinase-dependent Rap1 activation slows storage-induced platelet deterioration. Transfusion (2009) 0.84
Advances in the analysis of dynamic protein complexes by proteomics and data processing. Anal Bioanal Chem (2006) 0.81
In silico protein interaction analysis using the global proteome machine database. J Proteome Res (2010) 0.78
Liquid chromatography-atmospheric pressure electron capture dissociation mass spectrometry for the structural analysis of peptides and proteins. Anal Chem (2012) 0.78
Multiple neutral loss monitoring (MNM): a multiplexed method for post-translational modification screening. J Am Soc Mass Spectrom (2006) 0.78
Accessibility governs the relative reactivity of basic residues in formaldehyde-induced protein modifications. Anal Chim Acta (2010) 0.78
A new ion source and procedures for atmospheric pressure-electron capture dissociation of peptides. J Am Soc Mass Spectrom (2011) 0.77
Statistical evaluation of electrospray tandem mass spectra for optimized peptide fragmentation. J Am Soc Mass Spectrom (2005) 0.77
Chemical proteomics and its impact on the drug discovery process. Expert Rev Proteomics (2012) 0.76
Applications of current proteomics techniques in modern drug design. Curr Comput Aided Drug Des (2010) 0.75
Multiple precursor ion monitoring-a new scan strategy on hybrid quadrupole/linear ion trap mass spectrometers? Rapid Commun Mass Spectrom (2004) 0.75
Activation of small GTPases of the Ras and Rho family by growth factors active on mast cells. Mol Immunol (2002) 0.75
A multiplexed post-translational modification monitoring approach on a matrix-assisted laser desorption/ionization time-of-flight/time-of-flight mass spectrometer. Rapid Commun Mass Spectrom (2007) 0.75
Development and application of a quantitative multiplexed small GTPase activity assay using targeted proteomics. J Proteome Res (2015) 0.75
Specific detection of O-linked N-acetylhexosamine modified peptides using multiple precursor ion scans. Rapid Commun Mass Spectrom (2005) 0.75
Correlation and convolution analysis of peptide mass spectra. Anal Chem (2006) 0.75