Published in J Proteome Res on December 14, 2004
Quantitative reactivity profiling predicts functional cysteines in proteomes. Nature (2010) 4.04
Cysteine-mediated redox signaling: chemistry, biology, and tools for discovery. Chem Rev (2013) 2.02
NRF2 Promotes Tumor Maintenance by Modulating mRNA Translation in Pancreatic Cancer. Cell (2016) 1.74
Thiol oxidation in signaling and response to stress: detection and quantification of physiological and pathophysiological thiol modifications. Free Radic Biol Med (2007) 1.63
The redox proteome. J Biol Chem (2013) 1.48
Quantitative analysis of redox-sensitive proteome with DIGE and ICAT. J Proteome Res (2008) 1.37
A key role for mitochondria in endothelial signaling by plasma cysteine/cystine redox potential. Free Radic Biol Med (2009) 1.31
Targeted quantitation of site-specific cysteine oxidation in endogenous proteins using a differential alkylation and multiple reaction monitoring mass spectrometry approach. Mol Cell Proteomics (2010) 1.26
Cysteine oxidative posttranslational modifications: emerging regulation in the cardiovascular system. Circ Res (2013) 1.19
Proteomic approaches to the characterization of protein thiol modification. Curr Opin Chem Biol (2010) 1.13
Thiol/disulfide redox states in signaling and sensing. Crit Rev Biochem Mol Biol (2013) 1.13
Elucidation of thioredoxin target protein networks in mouse. Mol Cell Proteomics (2009) 1.11
Quantification of oxidative posttranslational modifications of cysteine thiols of p21ras associated with redox modulation of activity using isotope-coded affinity tags and mass spectrometry. Free Radic Biol Med (2006) 1.08
Proteomics: challenges, techniques and possibilities to overcome biological sample complexity. Hum Genomics Proteomics (2009) 1.07
Regulatory control or oxidative damage? Proteomic approaches to interrogate the role of cysteine oxidation status in biological processes. Mol Cell Proteomics (2011) 1.05
Thiol-based redox switches. Biochim Biophys Acta (2014) 1.03
Improved identification of wheat gluten proteins through alkylation of cysteine residues and peptide-based mass spectrometry. Sci Rep (2013) 1.01
The redoxome: Proteomic analysis of cellular redox networks. Curr Opin Chem Biol (2010) 0.95
Selective targeting of the cysteine proteome by thioredoxin and glutathione redox systems. Mol Cell Proteomics (2013) 0.93
Profiling thiol redox proteome using isotope tagging mass spectrometry. J Vis Exp (2012) 0.93
Oxidative stress and the HIV-infected brain proteome. J Neuroimmune Pharmacol (2013) 0.92
Reactive oxygen production induced by the gut microbiota: pharmacotherapeutic implications. Curr Med Chem (2012) 0.91
Proteomic analysis of peptides tagged with dimedone and related probes. J Mass Spectrom (2014) 0.91
Quantitative mapping of reversible mitochondrial Complex I cysteine oxidation in a Parkinson disease mouse model. J Biol Chem (2011) 0.90
A novel strategy for global analysis of the dynamic thiol redox proteome. Mol Cell Proteomics (2012) 0.90
Redox signaling mediated by the gut microbiota. Free Radic Res (2013) 0.89
Chasing cysteine oxidative modifications: proteomic tools for characterizing cysteine redox status. Circ Cardiovasc Genet (2012) 0.88
The hydrogen peroxide-sensitive proteome of the chloroplast in vitro and in vivo. Front Plant Sci (2013) 0.87
Challenges, current status and future perspectives of proteomics in improving understanding, diagnosis and treatment of vascular disease. Eur J Vasc Endovasc Surg (2009) 0.86
Monitoring in vivo reversible cysteine oxidation in proteins using ICAT and mass spectrometry. Nat Protoc (2014) 0.85
Effect of single amino acid substitution on oxidative modifications of the Parkinson's disease-related protein, DJ-1. Mol Cell Proteomics (2011) 0.85
The Expanding Landscape of the Thiol Redox Proteome. Mol Cell Proteomics (2015) 0.84
Proteomic profile of reversible protein oxidation using PROP, purification of reversibly oxidized proteins. PLoS One (2012) 0.82
Redox signaling mediates symbiosis between the gut microbiota and the intestine. Gut Microbes (2014) 0.81
Quantification of cysteine oxidation in human estrogen receptor by mass spectrometry. Anal Chem (2007) 0.81
A twist on quantification: measuring the site occupancy of S-nitrosylation. Circ Res (2012) 0.81
Application of iTRAQ Reagents to Relatively Quantify the Reversible Redox State of Cysteine Residues. Int J Proteomics (2012) 0.80
Highly efficient and selective enrichment of peptide subsets combining fluorous chemistry with reversed-phase chromatography. Rapid Commun Mass Spectrom (2009) 0.80
Mass spectrometry-based methods for identifying oxidized proteins in disease: advances and challenges. Biomolecules (2015) 0.79
Cardiovascular redox and ox stress proteomics. Antioxid Redox Signal (2012) 0.79
Analysis of the early heterocyst Cys-proteome in the multicellular cyanobacterium Nostoc punctiforme reveals novel insights into the division of labor within diazotrophic filaments. BMC Genomics (2014) 0.77
Endothelial Cell Redox Regulation of Ischemic Angiogenesis. J Cardiovasc Pharmacol (2016) 0.76
Biophysical and proteomic characterization strategies for cysteine modifications in Ras GTPases. Methods Mol Biol (2014) 0.76
Bicarbonate Induced Redox Proteome Changes in Arabidopsis Suspension Cells. Front Plant Sci (2017) 0.75
Global analysis of myocardial peptides containing cysteines with irreversible sulfinic and sulfonic acid post-translational modifications. Mol Cell Proteomics (2015) 0.75
Comparative proteomic analysis of a cytosolic fraction from β3 integrin-deficient cells. Cancer Genomics Proteomics (2012) 0.75
From structure to redox: the diverse functional roles of disulfides and implications in disease. Proteomics (2017) 0.75
Hydrogen peroxide and central redox theory for aerobic life: A tribute to Helmut Sies: Scout, trailblazer, and redox pioneer. Arch Biochem Biophys (2016) 0.75
Absolute quantitation of post-translational modifications. Front Chem (2014) 0.75
Identification of thioredoxin target protein networks in cardiac tissues of a transgenic mouse. Methods Mol Biol (2013) 0.75
A common open representation of mass spectrometry data and its application to proteomics research. Nat Biotechnol (2004) 11.42
Human Proteinpedia enables sharing of human protein data. Nat Biotechnol (2008) 4.21
SIRT1 regulates hepatocyte lipid metabolism through activating AMP-activated protein kinase. J Biol Chem (2008) 4.16
AMPK phosphorylates and inhibits SREBP activity to attenuate hepatic steatosis and atherosclerosis in diet-induced insulin-resistant mice. Cell Metab (2011) 3.98
Polyphenols stimulate AMP-activated protein kinase, lower lipids, and inhibit accelerated atherosclerosis in diabetic LDL receptor-deficient mice. Diabetes (2006) 3.85
The meningococcal vaccine candidate GNA1870 binds the complement regulatory protein factor H and enhances serum resistance. J Immunol (2006) 3.62
S-Glutathiolation by peroxynitrite activates SERCA during arterial relaxation by nitric oxide. Nat Med (2004) 3.15
Oxidation of the zinc-thiolate complex and uncoupling of endothelial nitric oxide synthase by peroxynitrite. J Clin Invest (2002) 2.89
AMP-activated protein kinase is required for the lipid-lowering effect of metformin in insulin-resistant human HepG2 cells. J Biol Chem (2004) 2.83
Identification of FBL2 as a geranylgeranylated cellular protein required for hepatitis C virus RNA replication. Mol Cell (2005) 2.78
Comparison of the methods for profiling glycoprotein glycans--HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study. Glycobiology (2007) 2.71
T cell activation by lipopeptide antigens. Science (2004) 2.59
The human proteome project: current state and future direction. Mol Cell Proteomics (2011) 2.34
Tabulation of human transthyretin (TTR) variants, 2003. Amyloid (2003) 2.23
Detection of sequence-specific tyrosine nitration of manganese SOD and SERCA in cardiovascular disease and aging. Am J Physiol Heart Circ Physiol (2006) 2.19
Replacement of Oct4 by Tet1 during iPSC induction reveals an important role of DNA methylation and hydroxymethylation in reprogramming. Cell Stem Cell (2013) 2.17
S-glutathiolation of Ras mediates redox-sensitive signaling by angiotensin II in vascular smooth muscle cells. J Biol Chem (2004) 2.09
T1rho MR imaging is sensitive to evaluate liver fibrosis: an experimental study in a rat biliary duct ligation model. Radiology (2011) 2.05
Activation of protein kinase C zeta by peroxynitrite regulates LKB1-dependent AMP-activated protein kinase in cultured endothelial cells. J Biol Chem (2006) 1.98
Strain-stimulated hypertrophy in cardiac myocytes is mediated by reactive oxygen species-dependent Ras S-glutathiolation. J Mol Cell Cardiol (2006) 1.96
Mycobacterium tuberculosis pks12 produces a novel polyketide presented by CD1c to T cells. J Exp Med (2004) 1.96
Continuous particle separation in a microfluidic channel via standing surface acoustic waves (SSAW). Lab Chip (2009) 1.92
Elimination of oxidative degradation during the per-O-methylation of carbohydrates. J Am Chem Soc (2003) 1.90
Ascorbic acid enhances Tet-mediated 5-methylcytosine oxidation and promotes DNA demethylation in mammals. J Am Chem Soc (2013) 1.90
Electron capture dissociation initiates a free radical reaction cascade. J Am Chem Soc (2003) 1.82
Activation of 5'-AMP-activated kinase is mediated through c-Src and phosphoinositide 3-kinase activity during hypoxia-reoxygenation of bovine aortic endothelial cells. Role of peroxynitrite. J Biol Chem (2003) 1.81
Abnormal proteins can form aggresome in yeast: aggresome-targeting signals and components of the machinery. FASEB J (2008) 1.74
Modulation by peroxynitrite of Akt- and AMP-activated kinase-dependent Ser1179 phosphorylation of endothelial nitric oxide synthase. J Biol Chem (2002) 1.74
Apolipoprotein E on hepatitis C virion facilitates infection through interaction with low-density lipoprotein receptor. Virology (2009) 1.72
Structural details and composition of Trichomonas vaginalis lipophosphoglycan in relevance to the epithelial immune function. Glycoconj J (2008) 1.69
Software tool for researching annotations of proteins: open-source protein annotation software with data visualization. Anal Chem (2009) 1.68
Arterial stiffening precedes systolic hypertension in diet-induced obesity. Hypertension (2013) 1.65
Tandem mass spectrometry of sulfated heparin-like glycosaminoglycan oligosaccharides. Anal Chem (2003) 1.65
Identification of transcription complexes that contain the double bromodomain protein Brd2 and chromatin remodeling machines. J Proteome Res (2006) 1.64
Thiol oxidation in signaling and response to stress: detection and quantification of physiological and pathophysiological thiol modifications. Free Radic Biol Med (2007) 1.63
Structural features of the acyl chain determine self-phospholipid antigen recognition by a CD1d-restricted invariant NKT (iNKT) cell. J Biol Chem (2003) 1.61
Trichomonas vaginalis lipophosphoglycan triggers a selective upregulation of cytokines by human female reproductive tract epithelial cells. Infect Immun (2006) 1.61
Reverse transcription-associated dephosphorylation of hepadnavirus nucleocapsids. Proc Natl Acad Sci U S A (2005) 1.57
The cytosolic entry of diphtheria toxin catalytic domain requires a host cell cytosolic translocation factor complex. J Cell Biol (2003) 1.55
Ppm1, a novel polyprenol monophosphomannose synthase from Mycobacterium tuberculosis. Biochem J (2002) 1.54
STAT5 protein negatively regulates T follicular helper (Tfh) cell generation and function. J Biol Chem (2012) 1.51
Glycoform quantification of chondroitin/dermatan sulfate using a liquid chromatography-tandem mass spectrometry platform. Biochemistry (2006) 1.51
Genetic variation of PSCA gene is associated with the risk of both diffuse- and intestinal-type gastric cancer in a Chinese population. Int J Cancer (2010) 1.49
S-glutathiolation by peroxynitrite of p21ras at cysteine-118 mediates its direct activation and downstream signaling in endothelial cells. FASEB J (2006) 1.47
Comparison of methods for profiling O-glycosylation: Human Proteome Organisation Human Disease Glycomics/Proteome Initiative multi-institutional study of IgA1. Mol Cell Proteomics (2009) 1.45
Identification of protein components in human acquired enamel pellicle and whole saliva using novel proteomics approaches. J Biol Chem (2002) 1.44
LC-MS-based method for the qualitative and quantitative analysis of complex lipid mixtures. J Lipid Res (2006) 1.42
COG8 deficiency causes new congenital disorder of glycosylation type IIh. Hum Mol Genet (2007) 1.41
Characterization of a new qQq-FTICR mass spectrometer for post-translational modification analysis and top-down tandem mass spectrometry of whole proteins. J Am Soc Mass Spectrom (2005) 1.41
Temporal control of NF-kappaB activation by ERK differentially regulates interleukin-1beta-induced gene expression. J Biol Chem (2003) 1.41
Molecular mechanism of lipopeptide presentation by CD1a. Immunity (2005) 1.41
A tandem mass spectrometric approach to determination of chondroitin/dermatan sulfate oligosaccharide glycoforms. Glycobiology (2006) 1.38
Alpha-adrenergic receptor-stimulated hypertrophy in adult rat ventricular myocytes is mediated via thioredoxin-1-sensitive oxidative modification of thiols on Ras. Circulation (2005) 1.37
D18G transthyretin is monomeric, aggregation prone, and not detectable in plasma and cerebrospinal fluid: a prescription for central nervous system amyloidosis? Biochemistry (2003) 1.36
Tandem mass spectrometric strategies for determination of sulfation positions and uronic acid epimerization in chondroitin sulfate oligosaccharides. J Am Soc Mass Spectrom (2003) 1.36
Isotope-coded affinity tag approach to identify and quantify oxidant-sensitive protein thiols. Mol Cell Proteomics (2004) 1.33
The polyphenols resveratrol and S17834 prevent the structural and functional sequelae of diet-induced metabolic heart disease in mice. Circulation (2012) 1.32
ENU-induced phenovariance in mice: inferences from 587 mutations. BMC Res Notes (2012) 1.28
Crystal structure of a potassium ion transporter, TrkH. Nature (2011) 1.25
High glucose oxidizes SERCA cysteine-674 and prevents inhibition by nitric oxide of smooth muscle cell migration. J Mol Cell Cardiol (2007) 1.24
Cysteine-674 of the sarco/endoplasmic reticulum calcium ATPase is required for the inhibition of cell migration by nitric oxide. Arterioscler Thromb Vasc Biol (2007) 1.23
Collisionally activated dissociation and electron capture dissociation provide complementary structural information for branched permethylated oligosaccharides. J Am Soc Mass Spectrom (2007) 1.23
Deamidation: Differentiation of aspartyl from isoaspartyl products in peptides by electron capture dissociation. Protein Sci (2005) 1.23
S-glutathiolation of p21ras by peroxynitrite mediates endothelial insulin resistance caused by oxidized low-density lipoprotein. Arterioscler Thromb Vasc Biol (2006) 1.22
The membrane-bound transcription factor CREB3L1 is activated in response to virus infection to inhibit proliferation of virus-infected cells. Cell Host Microbe (2011) 1.22
Characterization of pu-erh tea using chemical and metabolic profiling approaches. J Agric Food Chem (2009) 1.22
Comparative glycomics of connective tissue glycosaminoglycans. Proteomics (2008) 1.22
Distinct glycan structures of uroplakins Ia and Ib: structural basis for the selective binding of FimH adhesin to uroplakin Ia. J Biol Chem (2006) 1.22
Nitroxyl activates SERCA in cardiac myocytes via glutathiolation of cysteine 674. Circ Res (2009) 1.22
Cardiac amyloidosis in African Americans: comparison of clinical and laboratory features of transthyretin V122I amyloidosis and immunoglobulin light chain amyloidosis. Am Heart J (2009) 1.20
Quantitative assessment of tyrosine nitration of manganese superoxide dismutase in angiotensin II-infused rat kidney. Am J Physiol Heart Circ Physiol (2003) 1.19
A novel mutant cardiac troponin C disrupts molecular motions critical for calcium binding affinity and cardiomyocyte contractility. Biophys J (2008) 1.18
Vascular aging: chronic oxidative stress and impairment of redox signaling-consequences for vascular homeostasis and disease. Ann Med (2012) 1.18
CD1c bypasses lysosomes to present a lipopeptide antigen with 12 amino acids. J Exp Med (2009) 1.17
A chip-based amide-HILIC LC/MS platform for glycosaminoglycan glycomics profiling. Proteomics (2009) 1.17
Upregulation of Nox4 by TGF{beta}1 oxidizes SERCA and inhibits NO in arterial smooth muscle of the prediabetic Zucker rat. Circ Res (2010) 1.17
Redox-mediated reciprocal regulation of SERCA and Na+-Ca2+ exchanger contributes to sarcoplasmic reticulum Ca2+ depletion in cardiac myocytes. Free Radic Biol Med (2010) 1.17
Heparin-mediated conformational changes in fibronectin expose vascular endothelial growth factor binding sites. Biochemistry (2006) 1.16
Transcriptional profiling of human glioblastoma vessels indicates a key role of VEGF-A and TGFβ2 in vascular abnormalization. J Pathol (2012) 1.16
The modulation of transthyretin tetramer stability by cysteine 10 adducts and the drug diflunisal. Direct analysis by fluorescence-detected analytical ultracentrifugation. J Biol Chem (2008) 1.16
The prognostic significance of apoptosis-related biological markers in Chinese gastric cancer patients. PLoS One (2011) 1.16
Influence of charge state on product ion mass spectra and the determination of 4S/6S sulfation sequence of chondroitin sulfate oligosaccharides. Anal Chem (2002) 1.15
A novel human autoantigen, endothelial cell growth factor, is a target of T and B cell responses in patients with Lyme disease. Arthritis Rheum (2013) 1.15
MIRAGE: the minimum information required for a glycomics experiment. Glycobiology (2014) 1.14
Cysteine-674 oxidation and degradation of sarcoplasmic reticulum Ca(2+) ATPase in diabetic pig aorta. Free Radic Biol Med (2008) 1.14
Improved hydrophilic interaction chromatography LC/MS of heparinoids using a chip with postcolumn makeup flow. Anal Chem (2010) 1.14
Amyloidogenic and associated proteins in systemic amyloidosis proteome of adipose tissue. Mol Cell Proteomics (2008) 1.14
Redox regulation of sirtuin-1 by S-glutathiolation. Antioxid Redox Signal (2010) 1.13