Published in BMC Genomics on January 10, 2006
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Targeted modification of wheat grain protein to reduce the content of celiac causing epitopes. Funct Integr Genomics (2012) 0.88
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Quantitative and qualitative differences in celiac disease epitopes among durum wheat varieties identified through deep RNA-amplicon sequencing. BMC Genomics (2013) 0.80
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The molecular diversity of α-gliadin genes in the tribe Triticeae. Genetica (2013) 0.80
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Genetic diversity and population structure of wheat in India and Turkey. AoB Plants (2015) 0.78
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Testing the safety of alternative wheat species and cultivars for consumption by celiac patients. Am J Clin Nutr (2012) 0.77
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Molecular cloning and functional characterization of two novel high molecular weight glutenin subunit genes in Aegilops markgrafii. J Genet (2017) 0.75
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Mapping of gluten T-cell epitopes in the bread wheat ancestors: implications for celiac disease. Gastroenterology (2005) 1.70
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Ancient haplotypes resulting from extensive molecular rearrangements in the wheat A genome have been maintained in species of three different ploidy levels. Genome Res (2005) 1.15
Genomic organization of the complex alpha-gliadin gene loci in wheat. Theor Appl Genet (2004) 1.01
Proteome analysis of diploid, tetraploid and hexaploid wheat: towards understanding genome interaction in protein expression. Proteomics (2003) 0.96
Gluten: a two-edged sword. Immunopathogenesis of celiac disease. Springer Semin Immunopathol (2005) 0.95
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A catalog of reference genomes from the human microbiome. Science (2010) 8.10
Metabolic reconstruction for metagenomic data and its application to the human microbiome. PLoS Comput Biol (2012) 6.27
Genome analysis of the platypus reveals unique signatures of evolution. Nature (2008) 5.74
Draft genome of the filarial nematode parasite Brugia malayi. Science (2007) 5.28
Genomic variation landscape of the human gut microbiome. Nature (2012) 4.38
The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism. Nat Genet (2008) 3.93
Comparative and demographic analysis of orang-utan genomes. Nature (2011) 3.83
Autologous bone marrow-derived mesenchymal stromal cell treatment for refractory luminal Crohn's disease: results of a phase I study. Gut (2010) 3.09
The gluten response in children with celiac disease is directed toward multiple gliadin and glutenin peptides. Gastroenterology (2002) 2.91
Autoreactive CD8 T cells associated with beta cell destruction in type 1 diabetes. Proc Natl Acad Sci U S A (2005) 2.70
A transcriptomic analysis of the phylum Nematoda. Nat Genet (2004) 2.68
Natural variation in toxicity of wheat: potential for selection of nontoxic varieties for celiac disease patients. Gastroenterology (2005) 2.66
Specificity of tissue transglutaminase explains cereal toxicity in celiac disease. J Exp Med (2002) 2.49
Randomized feeding intervention in infants at high risk for celiac disease. N Engl J Med (2014) 2.39
The HLA-DQ2 gene dose effect in celiac disease is directly related to the magnitude and breadth of gluten-specific T cell responses. Proc Natl Acad Sci U S A (2003) 2.30
Characterization of cereal toxicity for celiac disease patients based on protein homology in grains. Gastroenterology (2003) 2.23
Effector genomics accelerates discovery and functional profiling of potato disease resistance and phytophthora infestans avirulence genes. PLoS One (2008) 2.21
Optimizing read mapping to reference genomes to determine composition and species prevalence in microbial communities. PLoS One (2012) 2.09
A liquid chromatography-mass spectrometry-based metabolome database for tomato. Plant Physiol (2006) 2.08
Autoantibodies recognizing carbamylated proteins are present in sera of patients with rheumatoid arthritis and predict joint damage. Proc Natl Acad Sci U S A (2011) 2.07
The ubiquitin-domain protein HERP forms a complex with components of the endoplasmic reticulum associated degradation pathway. J Mol Biol (2005) 2.04
QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyploid species. BMC Bioinformatics (2006) 2.03
Nomenclature and listing of celiac disease relevant gluten T-cell epitopes restricted by HLA-DQ molecules. Immunogenetics (2012) 1.79
New insight into the history of domesticated apple: secondary contribution of the European wild apple to the genome of cultivated varieties. PLoS Genet (2012) 1.73
Quantitation and phenotypic analysis of natural killer T cells in primary biliary cirrhosis using a human CD1d tetramer. Gastroenterology (2002) 1.72
Skin-depigmenting agent monobenzone induces potent T-cell autoimmunity toward pigmented cells by tyrosinase haptenation and melanosome autophagy. J Invest Dermatol (2011) 1.71
Widespread colonization of the lung by Tropheryma whipplei in HIV infection. Am J Respir Crit Care Med (2013) 1.66
Allo-HLA-reactive T cells inducing graft-versus-host disease are single peptide specific. Blood (2011) 1.66
Highly efficient gluten degradation with a newly identified prolyl endoprotease: implications for celiac disease. Am J Physiol Gastrointest Liver Physiol (2006) 1.62
Genetic structure and diversity of cultivated soybean (Glycine max (L.) Merr.) landraces in China. Theor Appl Genet (2008) 1.62
Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles. Genome Res (2011) 1.57
Silencing of germline-expressed genes by DNA elimination in somatic cells. Dev Cell (2012) 1.54
Identification of a potential physiological precursor of aberrant cells in refractory coeliac disease type II. Gut (2012) 1.52
In plants, highly expressed genes are the least compact. Trends Genet (2006) 1.50
Coverage theories for metagenomic DNA sequencing based on a generalization of Stevens' theorem. J Math Biol (2012) 1.49
Intolerance of celiac disease patients to bovine milk is not due to the presence of T-cell stimulatory epitopes of gluten. Nutrition (2008) 1.45
Celiac disease--sandwiched between innate and adaptive immunity. Hum Immunol (2006) 1.44
DNA microarrays for functional plant genomics. Plant Mol Biol (2002) 1.43
Towards a unified genetic map for diploid roses. Theor Appl Genet (2010) 1.42
The molecular basis for oat intolerance in patients with celiac disease. PLoS Med (2004) 1.40
Proteosomal degradation of BCR/ABL protein can generate an HLA-A*0301-restricted peptide, but high-avidity T cells recognizing this leukemia-specific antigen were not demonstrated. Haematologica (2004) 1.40
Genotype calling in tetraploid species from bi-allelic marker data using mixture models. BMC Bioinformatics (2011) 1.38
Celiac disease: how complicated can it get? Immunogenetics (2010) 1.34
Endosymbiont DNA in endobacteria-free filarial nematodes indicates ancient horizontal genetic transfer. PLoS One (2010) 1.33
Combined transcriptome and proteome analysis identifies pathways and markers associated with the establishment of rapeseed microspore-derived embryo development. Plant Physiol (2007) 1.28
MiR-17/20/93/106 promote hematopoietic cell expansion by targeting sequestosome 1-regulated pathways in mice. Blood (2011) 1.26
Helminth genomics: The implications for human health. PLoS Negl Trop Dis (2009) 1.26
Efficient targeting of plant disease resistance loci using NBS profiling. Theor Appl Genet (2004) 1.25
RNAi effector diversity in nematodes. PLoS Negl Trop Dis (2011) 1.24
Antigen processing by nardilysin and thimet oligopeptidase generates cytotoxic T cell epitopes. Nat Immunol (2010) 1.24
Presence of celiac disease epitopes in modern and old hexaploid wheat varieties: wheat breeding may have contributed to increased prevalence of celiac disease. Theor Appl Genet (2010) 1.22
Efficient -2 frameshifting by mammalian ribosomes to synthesize an additional arterivirus protein. Proc Natl Acad Sci U S A (2012) 1.22
A vertebrate case study of the quality of assemblies derived from next-generation sequences. Genome Biol (2011) 1.22
A practical, bioinformatic workflow system for large data sets generated by next-generation sequencing. Nucleic Acids Res (2010) 1.22
Methylation of arginine residues interferes with citrullination by peptidylarginine deiminases in vitro. J Mol Biol (2007) 1.21
Gene expression programs during Brassica oleracea seed maturation, osmopriming, and germination are indicators of progression of the germination process and the stress tolerance level. Plant Physiol (2004) 1.20
A pipeline for high throughput detection and mapping of SNPs from EST databases. Mol Breed (2010) 1.20
AFLP markers as a tool to reconstruct complex relationships: A case study in Rosa (Rosaceae). Am J Bot (2008) 1.18
Selective cytotoxic T-lymphocyte targeting of tumor immune escape variants. Nat Med (2006) 1.17
Sucrose prevents up-regulation of senescence-associated genes in carnation petals. J Exp Bot (2007) 1.17
Recognition of citrullinated and carbamylated proteins by human antibodies: specificity, cross-reactivity and the 'AMC-Senshu' method. Ann Rheum Dis (2012) 1.16
Posttranslational modification of HLA-DQ binding islet autoantigens in type 1 diabetes. Diabetes (2013) 1.16
The role of HLA-DQ8 beta57 polymorphism in the anti-gluten T-cell response in coeliac disease. Nature (2008) 1.16
Circulating preproinsulin signal peptide-specific CD8 T cells restricted by the susceptibility molecule HLA-A24 are expanded at onset of type 1 diabetes and kill β-cells. Diabetes (2012) 1.15
Combined transcript and metabolite analysis reveals genes involved in spider mite induced volatile formation in cucumber plants. Plant Physiol (2004) 1.15
Tuber on a chip: differential gene expression during potato tuber development. Plant Biotechnol J (2005) 1.15
Consumption of gluten with gluten-degrading enzyme by celiac patients: a pilot-study. World J Gastroenterol (2013) 1.14
Large-scale identification of polymorphic microsatellites using an in silico approach. BMC Bioinformatics (2008) 1.13
Nematode.net update 2008: improvements enabling more efficient data mining and comparative nematode genomics. Nucleic Acids Res (2008) 1.13
Phenotypic and functional characterization of CD4 T cells expressing killer Ig-like receptors. J Immunol (2004) 1.13
The human leukocyte antigen-presented ligandome of B lymphocytes. Mol Cell Proteomics (2013) 1.13
De novo production of the flavonoid naringenin in engineered Saccharomyces cerevisiae. Microb Cell Fact (2012) 1.13
Massively parallel sequencing and analysis of the Necator americanus transcriptome. PLoS Negl Trop Dis (2010) 1.12
Sepsis from the gut: the enteric habitat of bacteria that cause late-onset neonatal bloodstream infections. Clin Infect Dis (2014) 1.11
Exploration of bacterial community classes in major human habitats. Genome Biol (2014) 1.11
A new type of metal recognition by human T cells: contact residues for peptide-independent bridging of T cell receptor and major histocompatibility complex by nickel. J Exp Med (2003) 1.10
FISH mapping and molecular organization of the major repetitive sequences of tomato. Chromosome Res (2008) 1.09
An antibody produced in tobacco expressing a hybrid beta-1,4-galactosyltransferase is essentially devoid of plant carbohydrate epitopes. Proc Natl Acad Sci U S A (2006) 1.09
Large-scale characterization of natural ligands explains the unique gluten-binding properties of HLA-DQ2. J Immunol (2008) 1.08
Removing celiac disease-related gluten proteins from bread wheat while retaining technological properties: a study with Chinese Spring deletion lines. BMC Plant Biol (2009) 1.07
Nematode.net update 2011: addition of data sets and tools featuring next-generation sequencing data. Nucleic Acids Res (2011) 1.07
Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines. Genome Biol (2007) 1.06
The nonpolymorphic MHC Qa-1b mediates CD8+ T cell surveillance of antigen-processing defects. J Exp Med (2009) 1.05
PRAME-specific Allo-HLA-restricted T cells with potent antitumor reactivity useful for therapeutic T-cell receptor gene transfer. Clin Cancer Res (2011) 1.05
AIDS-protective HLA-B*27/B*57 and chimpanzee MHC class I molecules target analogous conserved areas of HIV-1/SIVcpz. Proc Natl Acad Sci U S A (2010) 1.04
Genotypic variation in genome-wide transcription profiles induced by insect feeding: Brassica oleracea--Pieris rapae interactions. BMC Genomics (2007) 1.04
Multiple myeloma-reactive T cells recognize an activation-induced minor histocompatibility antigen encoded by the ATP-dependent interferon-responsive (ADIR) gene. Blood (2007) 1.04
Transcriptome analysis of female and male Xiphophorus maculatus Jp 163 A. PLoS One (2011) 1.04
Genetic variation in the endangered wild apple (Malus sylvestris (L.) Mill.) in Belgium as revealed by amplified fragment length polymorphism and microsatellite markers. Mol Ecol (2003) 1.02