PubRank

Víctor de Lorenzo

Author PubWeight™ 88.39‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Heavy metal tolerance and metal homeostasis in Pseudomonas putida as revealed by complete genome analysis. Environ Microbiol 2003 1.61
2 Promoters in the environment: transcriptional regulation in its natural context. Nat Rev Microbiol 2005 1.52
3 Export of autotransported proteins proceeds through an oligomeric ring shaped by C-terminal domains. EMBO J 2002 1.50
4 Microbial responses to environmental arsenic. Biometals 2009 1.48
5 Transcriptional tradeoff between metabolic and stress-response programs in Pseudomonas putida KT2440 cells exposed to toluene. J Biol Chem 2006 1.45
6 The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes. Nucleic Acids Res 2012 1.42
7 Production of functional single-chain Fv antibodies in the cytoplasm of Escherichia coli. J Mol Biol 2002 1.39
8 Exploiting the genetic and biochemical capacities of bacteria for the remediation of heavy metal pollution. FEMS Microbiol Rev 2002 1.32
9 Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray. Environ Microbiol 2006 1.29
10 Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multi-resistant antibiotic profile of Pseudomonas putida KT2440. Environ Microbiol 2011 1.24
11 The logicome of environmental bacteria: merging catabolic and regulatory events with Boolean formalisms. Environ Microbiol 2011 1.20
12 Tracing explosives in soil with transcriptional regulators of Pseudomonas putida evolved for responding to nitrotoluenes. Microb Biotechnol 2008 1.17
13 pBAM1: an all-synthetic genetic tool for analysis and construction of complex bacterial phenotypes. BMC Microbiol 2011 1.15
14 The sigma54 regulon (sigmulon) of Pseudomonas putida. Environ Microbiol 2003 1.14
15 Noise and robustness in prokaryotic regulatory networks. Annu Rev Microbiol 2010 1.13
16 Functional transplantation of the sumoylation machinery into Escherichia coli. Protein Expr Purif 2004 1.12
17 The environmental fate of organic pollutants through the global microbial metabolism. Mol Syst Biol 2007 1.11
18 Transcriptional regulators à la carte: engineering new effector specificities in bacterial regulatory proteins. Curr Opin Biotechnol 2005 1.11
19 Synthetic constructs in/for the environment: managing the interplay between natural and engineered Biology. FEBS Lett 2012 1.09
20 Structural tolerance of bacterial autotransporters for folded passenger protein domains. Mol Microbiol 2004 1.07
21 Thioredoxin fusions increase folding of single chain Fv antibodies in the cytoplasm of Escherichia coli: evidence that chaperone activity is the prime effect of thioredoxin. J Mol Biol 2006 1.06
22 The Entner-Doudoroff pathway empowers Pseudomonas putida KT2440 with a high tolerance to oxidative stress. Environ Microbiol 2013 1.02
23 Sinorhizobium meliloti fur-like (Mur) protein binds a fur box-like sequence present in the mntA promoter in a manganese-responsive manner. Appl Environ Microbiol 2007 1.01
24 Exploring the microbial biodegradation and biotransformation gene pool. Trends Biotechnol 2005 1.00
25 Engineering the soil bacterium Pseudomonas putida for arsenic methylation. Appl Environ Microbiol 2013 1.00
26 Emergence of novel functions in transcriptional regulators by regression to stem protein types. Mol Microbiol 2007 0.99
27 The phosphotransferase system formed by PtsP, PtsO, and PtsN proteins controls production of polyhydroxyalkanoates in Pseudomonas putida. J Bacteriol 2007 0.99
28 Genetic evidence that catabolites of the Entner-Doudoroff pathway signal C source repression of the sigma54 Pu promoter of Pseudomonas putida. J Bacteriol 2004 0.98
29 Adaptation of the yeast URA3 selection system to gram-negative bacteria and generation of a {delta}betCDE Pseudomonas putida strain. Appl Environ Microbiol 2005 0.98
30 Regulatory tasks of the phosphoenolpyruvate-phosphotransferase system of Pseudomonas putida in central carbon metabolism. MBio 2012 0.98
31 Evidence of in vivo cross talk between the nitrogen-related and fructose-related branches of the carbohydrate phosphotransferase system of Pseudomonas putida. J Bacteriol 2008 0.96
32 Mining logic gates in prokaryotic transcriptional regulation networks. FEBS Lett 2008 0.96
33 Engineering an anaerobic metabolic regime in Pseudomonas putida KT2440 for the anoxic biodegradation of 1,3-dichloroprop-1-ene. Metab Eng 2012 0.95
34 The metabolic cost of flagellar motion in Pseudomonas putida KT2440. Environ Microbiol 2013 0.93
35 The interplay of the EIIA(Ntr) component of the nitrogen-related phosphotransferase system (PTS(Ntr)) of Pseudomonas putida with pyruvate dehydrogenase. Biochim Biophys Acta 2011 0.92
36 Stable implantation of orthogonal sensor circuits in Gram-negative bacteria for environmental release. Environ Microbiol 2008 0.92
37 Metabolic and regulatory rearrangements underlying glycerol metabolism in Pseudomonas putida KT2440. Environ Microbiol 2013 0.90
38 The ancestral role of the phosphoenolpyruvate-carbohydrate phosphotransferase system (PTS) as exposed by comparative genomics. Res Microbiol 2007 0.90
39 Association of dnt genes of Burkholderia sp. DNT with the substrate-blind regulator DntR draws the evolutionary itinerary of 2,4-dinitrotoluene biodegradation. Mol Microbiol 2011 0.90
40 Engineering input/output nodes in prokaryotic regulatory circuits. FEMS Microbiol Rev 2010 0.90
41 Functional coexistence of twin arsenic resistance systems in Pseudomonas putida KT2440. Environ Microbiol 2014 0.89
42 Surveying biotransformations with à la carte genetic traps: translating dehydrochlorination of lindane (gamma-hexachlorocyclohexane) into lacZ-based phenotypes. Environ Microbiol 2006 0.89
43 Testing the limits of biological tolerance to arsenic in a fungus isolated from the River Tinto. Environ Microbiol 2003 0.89
44 Accumulation of inorganic polyphosphate enables stress endurance and catalytic vigour in Pseudomonas putida KT2440. Microb Cell Fact 2013 0.89
45 Random and cyclical deletion of large DNA segments in the genome of Pseudomonas putida. Environ Microbiol 2012 0.89
46 Subtractive hybridization reveals a high genetic diversity in the fish pathogen Photobacterium damselae subsp. piscicida: evidence of a SXT-like element. Microbiology 2005 0.88
47 Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida. J Biol Chem 2011 0.86
48 Regulatory exaptation of the catabolite repression protein (Crp)-cAMP system in Pseudomonas putida. Environ Microbiol 2010 0.85
49 Transposon-based and plasmid-based genetic tools for editing genomes of gram-negative bacteria. Methods Mol Biol 2012 0.85
50 Freeing Pseudomonas putida KT2440 of its proviral load strengthens endurance to environmental stresses. Environ Microbiol 2014 0.85
51 Implantation of unmarked regulatory and metabolic modules in Gram-negative bacteria with specialised mini-transposon delivery vectors. J Biotechnol 2012 0.85
52 Why are chlorinated pollutants so difficult to degrade aerobically? Redox stress limits 1,3-dichloroprop-1-ene metabolism by Pseudomonas pavonaceae. Philos Trans R Soc Lond B Biol Sci 2013 0.84
53 The m-xylene biodegradation capacity of Pseudomonas putida mt-2 is submitted to adaptation to abiotic stresses: evidence from expression profiling of xyl genes. Environ Microbiol 2006 0.84
54 The role of thiol species in the hypertolerance of Aspergillus sp. P37 to arsenic. J Biol Chem 2004 0.83
55 Growth-dependent phosphorylation of the PtsN (EIINtr) protein of Pseudomonas putida. J Biol Chem 2007 0.83
56 Implementing an OR-NOT (ORN) logic gate with components of the SOS regulatory network of Escherichia coli. Mol Biosyst 2011 0.82
57 The Standard European Vector Architecture (SEVA) plasmid toolkit. Methods Mol Biol 2014 0.82
58 Transcriptional wiring of the TOL plasmid regulatory network to its host involves the submission of the sigma54-promoter Pu to the response regulator PprA. Mol Microbiol 2008 0.82
59 Cooperative amino acid changes shift the response of the σ⁵⁴-dependent regulator XylR from natural m-xylene towards xenobiotic 2,4-dinitrotoluene. Mol Microbiol 2011 0.82
60 The logic layout of the TOL network of Pseudomonas putida pWW0 plasmid stems from a metabolic amplifier motif (MAM) that optimizes biodegradation of m-xylene. BMC Syst Biol 2011 0.82
61 Endogenous stress caused by faulty oxidation reactions fosters evolution of 2,4-dinitrotoluene-degrading bacteria. PLoS Genet 2013 0.82
62 Sigma 54 levels and physiological control of the Pseudomonas putida Pu promoter. J Bacteriol 2003 0.82
63 The grammar of (micro)biological diversity. Environ Microbiol 2002 0.81
64 The private life of environmental bacteria: pollutant biodegradation at the single cell level. Environ Microbiol 2014 0.81
65 Monitoring biodegradative enzymes with nanobodies raised in Camelus dromedarius with mixtures of catabolic proteins. Environ Microbiol 2011 0.81
66 The Crp regulator of Pseudomonas putida: evidence of an unusually high affinity for its physiological effector, cAMP. Environ Microbiol 2011 0.81
67 Autotransporters as scaffolds for novel bacterial adhesins: surface properties of Escherichia coli cells displaying Jun/Fos dimerization domains. J Bacteriol 2003 0.81
68 In situ detection of aromatic compounds with biosensor Pseudomonas putida cells preserved and delivered to soil in water-soluble gelatin capsules. Anal Bioanal Chem 2010 0.81
69 Transcriptomic fingerprinting of Pseudomonas putida under alternative physiological regimes. Environ Microbiol Rep 2013 0.80
70 Broadening the signal specificity of prokaryotic promoters by modifying cis-regulatory elements associated with a single transcription factor. Mol Biosyst 2012 0.80
71 A composite feed-forward loop I4-FFL involving IHF and Crc stabilizes expression of the XylR regulator of Pseudomonas putida mt-2 from growth phase perturbations. Mol Biosyst 2011 0.80
72 Non-disruptive release of Pseudomonas putida proteins by in situ electric breakdown of intact cells. J Microbiol Methods 2007 0.80
73 Cra regulates the cross-talk between the two branches of the phosphoenolpyruvate : phosphotransferase system of Pseudomonas putida. Environ Microbiol 2012 0.80
74 Expanding the boolean logic of the prokaryotic transcription factor XylR by functionalization of permissive sites with a protease-target sequence. ACS Synth Biol 2013 0.80
75 Stochasticity of TOL plasmid catabolic promoters sets a bimodal expression regime in Pseudomonas putida mt-2 exposed to m-xylene. Mol Microbiol 2012 0.79
76 Engineering whole-cell biosensors with no antibiotic markers for monitoring aromatic compounds in the environment. Methods Mol Biol 2012 0.79
77 Inferring the genetic network of m-xylene metabolism through expression profiling of the xyl genes of Pseudomonas putida mt-2. Mol Microbiol 2005 0.79
78 The IHF regulon of exponentially growing Pseudomonas putida cells. Environ Microbiol 2012 0.78
79 The differential response of the Pben promoter of Pseudomonas putida mt-2 to BenR and XylS prevents metabolic conflicts in m-xylene biodegradation. Environ Microbiol 2014 0.78
80 Secretion of proteins with dimerization capacity by the haemolysin type I transport system of Escherichia coli. Mol Microbiol 2004 0.78
81 Confidence, tolerance, and allowance in biological engineering: the nuts and bolts of living things. Bioessays 2014 0.77
82 From the phosphoenolpyruvate phosphotransferase system to selfish metabolism: a story retraced in Pseudomonas putida. FEMS Microbiol Lett 2014 0.77
83 Streamlining of a Pseudomonas putida genome using a combinatorial deletion method based on minitransposon insertion and the Flp-FRT recombination system. Methods Mol Biol 2012 0.77
84 A second chromosomal copy of the catA gene endows Pseudomonas putida mt-2 with an enzymatic safety valve for excess of catechol. Environ Microbiol 2014 0.77
85 Osmotic stress limits arsenic hypertolerance in Aspergillus sp. P37. FEMS Microbiol Ecol 2007 0.77
86 Transient XylR binding to the UAS of the Pseudomonas putida sigma54 promoter Pu revealed with high intensity UV footprinting in vivo. Nucleic Acids Res 2003 0.77
87 The TOL network of Pseudomonas putida mt-2 processes multiple environmental inputs into a narrow response space. Environ Microbiol 2012 0.76
88 m-xylene-responsive Pu-PnifH hybrid sigma54 promoters that overcome physiological control in Pseudomonas putida KT2442. J Bacteriol 2005 0.76
89 Microbial systems biology: bottom up and top down. FEMS Microbiol Rev 2008 0.76
90 In vivo drafting of single-chain antibodies for regulatory duty on the sigma54-promoter Pu of the TOL plasmid. Mol Microbiol 2006 0.76
91 Arsenate transport and reduction in the hyper-tolerant fungus Aspergillus sp. P37. Environ Microbiol 2003 0.76
92 Towards a global biotechnology scenario. Curr Opin Biotechnol 2012 0.76
93 Decoding the genetic networks of environmental bacteria: regulatory moonlighting of the TOL system of Pseudomonas putida mt-2. ISME J 2012 0.76
94 Modeling and analysis of flux distributions in the two branches of the phosphotransferase system in Pseudomonas putida. BMC Syst Biol 2012 0.75
95 Chromosomal integration of transcriptional fusions. Methods Mol Biol 2014 0.75
96 An electro-optical device from a biofilm structure created by bacterial activity. Adv Mater 2010 0.75
97 Physiological stress of intracellular Shigella flexneri visualized with a metabolic sensor fused to a surface-reporter system. FEBS Lett 2005 0.75
98 NanoPad: an integrated platform for bacterial production of camel nanobodies aimed at detecting environmental biomarkers. Proteomics 2013 0.75
99 Widening functional boundaries of the σ(54) promoter Pu of Pseudomonas putida by defeating extant physiological constraints. Mol Biosyst 2015 0.75
100 Rationally rewiring the connectivity of the XylR/Pu regulatory node of the m-xylene degradation pathway in Pseudomonas putida. Integr Biol (Camb) 2016 0.75
101 Functional analysis of the integration host factor site of the σ(54) Pu promoter of Pseudomonas putida by in vivo UV imprinting. Mol Microbiol 2011 0.75
102 Beautiful is not (necessarily) right: overcoming the Phryne's trial syndrome. Bioessays 2010 0.75
103 Production and characterization of a recombinant single-chain antibody (scFv) for tracing the σ54 factor of Pseudomonas putida. J Biotechnol 2011 0.75
104 The upstream-activating sequences of the sigma54 promoter Pu of Pseudomonas putida filter transcription readthrough from upstream genes. J Biol Chem 2006 0.75