Published in Mol Microbiol on August 23, 2006
Ribosome biogenesis and the translation process in Escherichia coli. Microbiol Mol Biol Rev (2007) 2.59
Megadalton complexes in the chloroplast stroma of Arabidopsis thaliana characterized by size exclusion chromatography, mass spectrometry, and hierarchical clustering. Mol Cell Proteomics (2010) 1.50
The universally conserved prokaryotic GTPases. Microbiol Mol Biol Rev (2011) 1.47
Deconstructing ribosome construction. Trends Biochem Sci (2009) 1.31
Genetic interaction screens with ordered overexpression and deletion clone sets implicate the Escherichia coli GTPase YjeQ in late ribosome biogenesis. J Bacteriol (2008) 1.19
A dominant negative mutant of the E. coli RNA helicase DbpA blocks assembly of the 50S ribosomal subunit. Nucleic Acids Res (2009) 1.13
The E. coli RhlE RNA helicase regulates the function of related RNA helicases during ribosome assembly. RNA (2007) 1.11
Suppression of a cold-sensitive mutation in ribosomal protein S5 reveals a role for RimJ in ribosome biogenesis. Mol Microbiol (2008) 1.02
Functional analysis of the GTPases EngA and YhbZ encoded by Salmonella typhimurium. Protein Sci (2007) 1.02
Inhibition of bacterial ribosome assembly: a suitable drug target? Microbiol Mol Biol Rev (2009) 1.01
A genome-scale metabolic flux model of Escherichia coli K-12 derived from the EcoCyc database. BMC Syst Biol (2014) 0.99
RsgA releases RbfA from 30S ribosome during a late stage of ribosome biosynthesis. EMBO J (2010) 0.98
Cryo-EM structures of the late-stage assembly intermediates of the bacterial 50S ribosomal subunit. Nucleic Acids Res (2013) 0.98
In vivo functional characterization of the Saccharomyces cerevisiae 60S biogenesis GTPase Nog1. Mol Genet Genomics (2007) 0.95
Functional domains of the 50S subunit mature late in the assembly process. Nucleic Acids Res (2013) 0.94
Distinct GDP/GTP bound states of the tandem G-domains of EngA regulate ribosome binding. Nucleic Acids Res (2009) 0.94
A high-throughput screen of the GTPase activity of Escherichia coli EngA to find an inhibitor of bacterial ribosome biogenesis. J Biomol Screen (2013) 0.92
Interactions of an essential Bacillus subtilis GTPase, YsxC, with ribosomes. J Bacteriol (2007) 0.88
The nucleoid as a site of rRNA processing and ribosome assembly. Front Plant Sci (2014) 0.84
The tRNAarg gene and engA are essential genes on the 1.7-Mb pSymB megaplasmid of Sinorhizobium meliloti and were translocated together from the chromosome in an ancestral strain. J Bacteriol (2012) 0.84
Structural insights into the function of a unique tandem GTPase EngA in bacterial ribosome assembly. Nucleic Acids Res (2014) 0.83
Potassium acts as a GTPase-activating element on each nucleotide-binding domain of the essential Bacillus subtilis EngA. PLoS One (2012) 0.83
Phosphorylation of CpgA protein enhances both its GTPase activity and its affinity for ribosome and is crucial for Bacillus subtilis growth and morphology. J Biol Chem (2012) 0.82
The evolutionary and functional diversity of classical and lesser-known cytoplasmic and organellar translational GTPases across the tree of life. BMC Genomics (2015) 0.81
RelA functionally suppresses the growth defect caused by a mutation in the G domain of the essential Der protein. J Bacteriol (2008) 0.80
Phenotypic investigations of the depletion of EngA in Escherichia coli are consistent with a role in ribosome biogenesis. FEMS Microbiol Lett (2014) 0.79
DER containing two consecutive GTP-binding domains plays an essential role in chloroplast ribosomal RNA processing and ribosome biogenesis in higher plants. J Exp Bot (2013) 0.79
YphC and YsxC GTPases assist the maturation of the central protuberance, GTPase associated region and functional core of the 50S ribosomal subunit. Nucleic Acids Res (2016) 0.79
Interaction of an essential Escherichia coli GTPase, Der, with the 50S ribosome via the KH-like domain. J Bacteriol (2010) 0.79
Crippling the essential GTPase Der causes dependence on ribosomal protein L9. J Bacteriol (2013) 0.79
Extended C-terminus and length of the linker connecting the G-domains are species-specific variations in the EngA family of GTPases. FEBS Open Bio (2012) 0.77
The large ribosomal subunit protein L9 enables the growth of EF-P deficient cells and enhances small subunit maturation. PLoS One (2015) 0.77
Identification of two DNA helicases UvrD and DinG as suppressors for lethality caused by mutant cspA mRNAs. J Mol Microbiol Biotechnol (2012) 0.76
Heterologous Expression of Der Homologs in an Escherichia coli der Mutant and Their Functional Complementation. J Bacteriol (2016) 0.75
Conserved GTPase LepA (Elongation Factor 4) functions in biogenesis of the 30S subunit of the 70S ribosome. Proc Natl Acad Sci U S A (2017) 0.75
MazF cleaves cellular mRNAs specifically at ACA to block protein synthesis in Escherichia coli. Mol Cell (2003) 4.63
Protein production and purification. Nat Methods (2008) 3.97
The expression profile of microRNAs in mouse embryos. Nucleic Acids Res (2006) 3.49
Toxin-antitoxin systems in bacteria and archaea. Annu Rev Genet (2011) 2.99
MazF, an mRNA interferase, mediates programmed cell death during multicellular Myxococcus development. Cell (2008) 2.70
Cold-shock induced high-yield protein production in Escherichia coli. Nat Biotechnol (2004) 2.62
Insights into the mRNA cleavage mechanism by MazF, an mRNA interferase. J Biol Chem (2004) 2.57
Robotic cloning and Protein Production Platform of the Northeast Structural Genomics Consortium. Methods Enzymol (2005) 2.54
Regulation of growth and death in Escherichia coli by toxin-antitoxin systems. Nat Rev Microbiol (2011) 2.49
EnvZ-OmpR interaction and osmoregulation in Escherichia coli. J Biol Chem (2002) 2.03
Single protein production in living cells facilitated by an mRNA interferase. Mol Cell (2005) 2.00
Bacterial addiction module toxin Doc inhibits translation elongation through its association with the 30S ribosomal subunit. Proc Natl Acad Sci U S A (2008) 1.81
Characterization of mRNA interferases from Mycobacterium tuberculosis. J Biol Chem (2006) 1.80
mRNA interferases, sequence-specific endoribonucleases from the toxin-antitoxin systems. Prog Mol Biol Transl Sci (2009) 1.77
MqsR, a crucial regulator for quorum sensing and biofilm formation, is a GCU-specific mRNA interferase in Escherichia coli. J Biol Chem (2009) 1.74
Characterization of ChpBK, an mRNA interferase from Escherichia coli. J Biol Chem (2005) 1.73
Bacterial toxin YafQ is an endoribonuclease that associates with the ribosome and blocks translation elongation through sequence-specific and frame-dependent mRNA cleavage. Mol Microbiol (2009) 1.71
Interference of mRNA function by sequence-specific endoribonuclease PemK. J Biol Chem (2004) 1.68
Suppression of defective ribosome assembly in a rbfA deletion mutant by overexpression of Era, an essential GTPase in Escherichia coli. Mol Microbiol (2003) 1.67
Superoxide dismutase expression attenuates cigarette smoke- or elastase-generated emphysema in mice. Am J Respir Crit Care Med (2005) 1.61
Mechanism of stabilization of a bacterial collagen triple helix in the absence of hydroxyproline. J Biol Chem (2007) 1.56
The mRNA interferases, MazF-mt3 and MazF-mt7 from Mycobacterium tuberculosis target unique pentad sequences in single-stranded RNA. Mol Microbiol (2008) 1.53
NBK/BIK antagonizes MCL-1 and BCL-XL and activates BAK-mediated apoptosis in response to protein synthesis inhibition. Genes Dev (2007) 1.53
Characterization of the interactions within the mazEF addiction module of Escherichia coli. J Biol Chem (2003) 1.48
YeeU enhances the bundling of cytoskeletal polymers of MreB and FtsZ, antagonizing the CbtA (YeeV) toxicity in Escherichia coli. Mol Microbiol (2012) 1.47
Transcription regulation of ompF and ompC by a single transcription factor, OmpR. J Biol Chem (2006) 1.47
The inhibitory mechanism of protein synthesis by YoeB, an Escherichia coli toxin. J Biol Chem (2009) 1.47
Bacterial bioreactors for high yield production of recombinant protein. J Biol Chem (2006) 1.46
Single protein production (SPP) system in Escherichia coli. Nat Protoc (2007) 1.44
Domain arrangement of Der, a switch protein containing two GTPase domains. Structure (2002) 1.39
The nucleic acid melting activity of Escherichia coli CspE is critical for transcription antitermination and cold acclimation of cells. J Biol Chem (2001) 1.37
Inhibitory mechanism of Escherichia coli RelE-RelB toxin-antitoxin module involves a helix displacement near an mRNA interferase active site. J Biol Chem (2009) 1.35
Genome-wide transcriptional analysis of the cold shock response in wild-type and cold-sensitive, quadruple-csp-deletion strains of Escherichia coli. J Bacteriol (2004) 1.32
YeeV is an Escherichia coli toxin that inhibits cell division by targeting the cytoskeleton proteins, FtsZ and MreB. Mol Microbiol (2010) 1.31
Staphylococcus aureus MazF specifically cleaves a pentad sequence, UACAU, which is unusually abundant in the mRNA for pathogenic adhesive factor SraP. J Bacteriol (2009) 1.31
Three amino acids in Escherichia coli CspE surface-exposed aromatic patch are critical for nucleic acid melting activity leading to transcription antitermination and cold acclimation of cells. J Biol Chem (2002) 1.29
Solution NMR structure of the NlpC/P60 domain of lipoprotein Spr from Escherichia coli: structural evidence for a novel cysteine peptidase catalytic triad. Biochemistry (2008) 1.27
Structural mechanism of transcriptional autorepression of the Escherichia coli RelB/RelE antitoxin/toxin module. J Mol Biol (2008) 1.26
Enhancement of translation initiation by A/T-rich sequences downstream of the initiation codon in Escherichia coli. J Mol Microbiol Biotechnol (2003) 1.23
Self-association of streptococcus pyogenes collagen-like constructs into higher order structures. Protein Sci (2009) 1.21
MazG, a nucleoside triphosphate pyrophosphohydrolase, interacts with Era, an essential GTPase in Escherichia coli. J Bacteriol (2002) 1.20
Complementation analysis of the cold-sensitive phenotype of the Escherichia coli csdA deletion strain. J Bacteriol (2007) 1.18
Characterization of YafO, an Escherichia coli toxin. J Biol Chem (2009) 1.16
Interaction of EnvZ, a sensory histidine kinase, with phosphorylated OmpR, the cognate response regulator. Mol Microbiol (2002) 1.13
Production of membrane proteins for NMR studies using the condensed single protein (cSPP) production system. J Struct Funct Genomics (2009) 1.12
Bacillus subtilis MazF-bs (EndoA) is a UACAU-specific mRNA interferase. FEBS Lett (2011) 1.11
Noncognate Mycobacterium tuberculosis toxin-antitoxins can physically and functionally interact. J Biol Chem (2010) 1.11
Spontaneous subunit exchange and biochemical evidence for trans-autophosphorylation in a dimer of Escherichia coli histidine kinase (EnvZ). J Mol Biol (2003) 1.10
Characterization of dual substrate binding sites in the homodimeric structure of Escherichia coli mRNA interferase MazF. J Mol Biol (2005) 1.10
Solution NMR structure of ribosome-binding factor A (RbfA), a cold-shock adaptation protein from Escherichia coli. J Mol Biol (2003) 1.08
Escherichia coli RNase R has dual activities, helicase and RNase. J Bacteriol (2009) 1.07
The New York Consortium on Membrane Protein Structure (NYCOMPS): a high-throughput platform for structural genomics of integral membrane proteins. J Struct Funct Genomics (2010) 1.07
Era and RbfA have overlapping function in ribosome biogenesis in Escherichia coli. J Mol Microbiol Biotechnol (2006) 1.07
The intramolecular chaperone-mediated protein folding. Curr Opin Struct Biol (2008) 1.06
The role of the G2 box, a conserved motif in the histidine kinase superfamily, in modulating the function of EnvZ. Mol Microbiol (2002) 1.05
The role of RbfA in 16S rRNA processing and cell growth at low temperature in Escherichia coli. J Mol Biol (2003) 1.04
Staphylococcus aureus YoeB homologues inhibit translation initiation. J Bacteriol (2009) 1.02
A Streptococcus pyogenes derived collagen-like protein as a non-cytotoxic and non-immunogenic cross-linkable biomaterial. Biomaterials (2010) 1.02
Structural and functional studies of the HAMP domain of EnvZ, an osmosensing transmembrane histidine kinase in Escherichia coli. J Biol Chem (2007) 1.02
Cysteine-scanning analysis of the dimerization domain of EnvZ, an osmosensing histidine kinase. J Bacteriol (2003) 1.01
Identification of the first functional toxin-antitoxin system in Streptomyces. PLoS One (2012) 1.00
Expanding the family of collagen proteins: recombinant bacterial collagens of varying composition form triple-helices of similar stability. Biomacromolecules (2010) 1.00
Inhibition of specific gene expressions by protein-mediated mRNA interference. Nat Commun (2012) 1.00
The mechanism of nucleic acid melting by a CspA family protein. J Mol Biol (2004) 1.00
RatA (YfjG), an Escherichia coli toxin, inhibits 70S ribosome association to block translation initiation. Mol Microbiol (2011) 0.99
Crystal structures of Phd-Doc, HigA, and YeeU establish multiple evolutionary links between microbial growth-regulating toxin-antitoxin systems. Structure (2010) 0.99
Defining requirements for collagenase cleavage in collagen type III using a bacterial collagen system. J Biol Chem (2012) 0.98
Growth and translation inhibition through sequence-specific RNA binding by Mycobacterium tuberculosis VapC toxin. J Biol Chem (2012) 0.97
The HAMP linker in histidine kinase dimeric receptors is critical for symmetric transmembrane signal transduction. J Biol Chem (2004) 0.96
Enhancement of the solubility of proteins overexpressed in Escherichia coli by heat shock. J Mol Microbiol Biotechnol (2002) 0.96
Folding pathway mediated by an intramolecular chaperone: dissecting conformational changes coincident with autoprocessing and the role of Ca(2+) in subtilisin maturation. J Biochem (2002) 0.95
Formation of the stoichiometric complex of EnvZ, a histidine kinase, with its response regulator, OmpR. Mol Microbiol (2002) 0.95
Acquisition of HIV-1 resistance in T lymphocytes using an ACA-specific E. coli mRNA interferase. Hum Gene Ther (2010) 0.95
Analysis of the role of the EnvZ linker region in signal transduction using a chimeric Tar/EnvZ receptor protein, Tez1. J Biol Chem (2003) 0.95
RNase activity of polynucleotide phosphorylase is critical at low temperature in Escherichia coli and is complemented by RNase II. J Bacteriol (2008) 0.95
Characterization of a mazEF toxin-antitoxin homologue from Staphylococcus equorum. J Bacteriol (2012) 0.95
A novel membrane-bound toxin for cell division, CptA (YgfX), inhibits polymerization of cytoskeleton proteins, FtsZ and MreB, in Escherichia coli. FEMS Microbiol Lett (2012) 0.93
DNA microarray analysis of the expression profile of Escherichia coli in response to treatment with 4,5-dihydroxy-2-cyclopenten-1-one. J Bacteriol (2002) 0.92
Functional and structural characterization of EnvZ, an osmosensing histidine kinase of E. coli. Methods Enzymol (2007) 0.92
Significant bias against the ACA triplet in the tmRNA sequence of Escherichia coli K-12. J Bacteriol (2009) 0.92
Noncollagenous region of the streptococcal collagen-like protein is a trimerization domain that supports refolding of adjacent homologous and heterologous collagenous domains. Protein Sci (2010) 0.92
Dissection of 16S rRNA methyltransferase (KsgA) function in Escherichia coli. J Bacteriol (2007) 0.91
Thermotoga maritima MazG protein has both nucleoside triphosphate pyrophosphohydrolase and pyrophosphatase activities. J Biol Chem (2003) 0.91
Structural basis of mRNA recognition and cleavage by toxin MazF and its regulation by antitoxin MazE in Bacillus subtilis. Mol Cell (2013) 0.89
The Cold Box stem-loop proximal to the 5'-end of the Escherichia coli cspA gene stabilizes its mRNA at low temperature. J Biol Chem (2001) 0.89
Human organic anion transporter hOAT1 forms homooligomers. J Biol Chem (2005) 0.89
Dissecting a bacterial collagen domain from Streptococcus pyogenes: sequence and length-dependent variations in triple helix stability and folding. J Biol Chem (2011) 0.87
Independently inducible system of gene expression for condensed single protein production (cSPP) suitable for high efficiency isotope enrichment. J Struct Funct Genomics (2009) 0.87
IRIP, a new ischemia/reperfusion-inducible protein that participates in the regulation of transporter activity. Mol Cell Biol (2005) 0.86
The design and development of Tar-EnvZ chimeric receptors. Methods Enzymol (2007) 0.86
Probing catalytically essential domain orientation in histidine kinase EnvZ by targeted disulfide crosslinking. J Mol Biol (2003) 0.86
The E. coli single protein production system for production and structural analysis of membrane proteins. J Struct Funct Genomics (2009) 0.85
Structural characterization of Escherichia coli sensor histidine kinase EnvZ: the periplasmic C-terminal core domain is critical for homodimerization. Biochem J (2005) 0.84
Fully automated high-quality NMR structure determination of small (2)H-enriched proteins. J Struct Funct Genomics (2010) 0.84
Use of amino acids as inducers for high-level protein expression in the single-protein production system. Appl Environ Microbiol (2010) 0.84
CspB and CspL, thermostable cold-shock proteins from Thermotoga maritima. Genes Cells (2003) 0.84
Transcriptional repressor HipB regulates the multiple promoters in Escherichia coli. J Mol Microbiol Biotechnol (2013) 0.83
Significant enhanced expression and solubility of human proteins in Escherichia coli by fusion with protein S from Myxococcus xanthus. Appl Environ Microbiol (2009) 0.83
Applications of nucleic acid chaperone activity of CspA and its homologues. J Mol Microbiol Biotechnol (2009) 0.82
A bacterial GAP-like protein, YihI, regulating the GTPase of Der, an essential GTP-binding protein in Escherichia coli. J Mol Biol (2010) 0.82