Published in PLoS Comput Biol on March 23, 2007
Global signatures of protein and mRNA expression levels. Mol Biosyst (2009) 4.43
Sequence signatures and mRNA concentration can explain two-thirds of protein abundance variation in a human cell line. Mol Syst Biol (2010) 3.56
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Extensive mass spectrometry-based analysis of the fission yeast proteome: the Schizosaccharomyces pombe PeptideAtlas. Mol Cell Proteomics (2013) 0.92
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How molecular competition influences fluxes in gene expression networks. PLoS One (2011) 0.88
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Detecting translational regulation by change point analysis of ribosome profiling data sets. RNA (2014) 0.86
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Efficiency of complex production in changing environment. BMC Syst Biol (2009) 0.84
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Cloning and functional characterization of three branch point oxidosqualene cyclases from Withania somnifera (L.) dunal. J Biol Chem (2014) 0.84
The ribosome in action: Tuning of translational efficiency and protein folding. Protein Sci (2016) 0.83
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Testing and Validation of Computational Methods for Mass Spectrometry. J Proteome Res (2015) 0.76
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Predictive biophysical modeling and understanding of the dynamics of mRNA translation and its evolution. Nucleic Acids Res (2016) 0.75
Advances in analyzing RNA diversity in eukaryotic transcriptomes: peering through the Omics lens. F1000Res (2016) 0.75
Rapid Sampling of Escherichia coli After Changing Oxygen Conditions Reveals Transcriptional Dynamics. Genes (Basel) (2017) 0.75
Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla. PLoS One (2016) 0.75
Nucleotide excision repair is not induced in human embryonic lung fibroblasts treated with environmental pollutants. PLoS One (2013) 0.75
Differential Analysis of the Secretome of WRL68 Cells Infected with the Chikungunya Virus. PLoS One (2015) 0.75
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Detection and interpretation of expression quantitative trait loci (eQTL). Methods (2009) 1.48
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Constitutive upregulation of the transforming growth factor-beta pathway in rheumatoid arthritis synovial fibroblasts. Arthritis Res Ther (2007) 1.29
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Gene expression profiling of potential PPARgamma target genes in mouse aorta. Physiol Genomics (2004) 1.12
Structural robustness of metabolic networks with respect to multiple knockouts. J Theor Biol (2007) 1.11
Large-scale de novo prediction of physical protein-protein association. Mol Cell Proteomics (2011) 1.11
Data-driven assessment of eQTL mapping methods. BMC Genomics (2010) 1.08
The frontotemporal dementia mutation R406W blocks tau's interaction with the membrane in an annexin A2-dependent manner. J Cell Biol (2011) 1.08
Global analysis reveals SRp20- and SRp75-specific mRNPs in cycling and neural cells. Nat Struct Mol Biol (2010) 1.05
Identification and characterization of protein subcomplexes in yeast. Proteomics (2005) 1.05
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The yeast Wsc1 cell surface sensor behaves like a nanospring in vivo. Nat Chem Biol (2009) 1.01
Assessing computational methods for transcription factor target gene identification based on ChIP-seq data. PLoS Comput Biol (2013) 1.00
High-resolution imaging of chemical and biological sites on living cells using peak force tapping atomic force microscopy. Langmuir (2012) 0.98
The ancient mammalian KRAB zinc finger gene cluster on human chromosome 8q24.3 illustrates principles of C2H2 zinc finger evolution associated with unique expression profiles in human tissues. BMC Genomics (2010) 0.98
Functional analyses of the extra- and intracellular domains of the yeast cell wall integrity sensors Mid2 and Wsc1. FEBS Lett (2007) 0.95
Together we are strong--cell wall integrity sensors in yeasts. Yeast (2010) 0.95
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Impact of natural genetic variation on gene expression dynamics. PLoS Genet (2013) 0.93
Cyk3 acts in actomyosin ring independent cytokinesis by recruiting Inn1 to the yeast bud neck. Mol Genet Genomics (2009) 0.93
Rho5p downregulates the yeast cell integrity pathway. J Cell Sci (2002) 0.93
Extensive mass spectrometry-based analysis of the fission yeast proteome: the Schizosaccharomyces pombe PeptideAtlas. Mol Cell Proteomics (2013) 0.92
Measuring cell wall thickness in living yeast cells using single molecular rulers. ACS Nano (2010) 0.91
Teamwork: improved eQTL mapping using combinations of machine learning methods. PLoS One (2012) 0.90
Selective stabilization of HIF-1α in renal tubular cells by 2-oxoglutarate analogues. Am J Pathol (2012) 0.89
Integrative analysis of low- and high-resolution eQTL. PLoS One (2010) 0.88
How do I begin? Sensing extracellular stress to maintain yeast cell wall integrity. Eur J Cell Biol (2011) 0.88
Yeast on the milky way: genetics, physiology and biotechnology of Kluyveromyces lactis. Yeast (2013) 0.88
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Comparing estimates of persistence and long-range transport potential among multimedia models. Environ Sci Technol (2005) 0.87
Predicting the fission yeast protein interaction network. G3 (Bethesda) (2012) 0.87
Bipolar electric-field enhanced trapping and detrapping of mobile donors in BiFeO3 memristors. ACS Appl Mater Interfaces (2014) 0.87
Stress induces remodelling of yeast interaction and co-expression networks. Mol Biosyst (2013) 0.87
Contribution of the fermenting yeast strain to ethyl carbamate generation in stone fruit spirits. Appl Microbiol Biotechnol (2007) 0.86
DASS: efficient discovery and p-value calculation of substructures in unordered data. Bioinformatics (2006) 0.86
Regulation of yeast protein kinase C activity by interaction with the small GTPase Rho1p through its amino-terminal HR1 domain. Mol Microbiol (2002) 0.86
Dissecting sensor functions in cell wall integrity signaling in Kluyveromyces lactis. Fungal Genet Biol (2007) 0.85
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Parallel evolution of genome structure and transcriptional landscape in the Epsilonproteobacteria. BMC Genomics (2013) 0.84
The effect of tea tree oil and antifungal agents on a reporter for yeast cell integrity signalling. Yeast (2007) 0.84
Accounting for redundancy when integrating gene interaction databases. PLoS One (2009) 0.84
Protein subcomplexes--molecular machines with highly specialized functions. IEEE Trans Nanobioscience (2007) 0.84
Evolution, biochemistry and genetics of protein kinase C in fungi. Curr Genet (2003) 0.84
Reversible "Applause sign" secondary to diffuse large B cell lymphoma. Mov Disord (2008) 0.83
A block of endocytosis of the yeast cell wall integrity sensors Wsc1 and Wsc2 results in reduced fitness in vivo. Mol Genet Genomics (2010) 0.83
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Microcompartments within the yeast plasma membrane. Biol Chem (2013) 0.82
Reconstruction and validation of RefRec: a global model for the yeast molecular interaction network. PLoS One (2010) 0.81
Assessing persistence and long-range transport potential of current-use pesticides. Environ Sci Technol (2009) 0.81
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A systematic study of the cell wall composition of Kluyveromyces lactis. Yeast (2010) 0.81
Systematic detection of epistatic interactions based on allele pair frequencies. PLoS Genet (2012) 0.81
Triple mammalian/yeast/bacterial shuttle vectors for single and combined Lentivirus- and Sindbis virus-mediated infections of neurons. Mol Genet Genomics (2012) 0.80
The 1,4-benzodiazepine Ro5-4864 (4-chlorodiazepam) suppresses multiple pro-inflammatory mast cell effector functions. Cell Commun Signal (2013) 0.79
New yeast/E. coli/Drosophila triple shuttle vectors for efficient generation of Drosophila P element transformation constructs. Gene (2012) 0.79
Topology of functional networks predicts physical binding of proteins. Bioinformatics (2012) 0.79
The value of PET compared to MRI in malignant head and neck tumors. Anticancer Res (2013) 0.79
DIGE-based protein expression analysis of B[a]P-exposed hepatoma cells reveals a complex stress response including alterations in oxidative stress, cell cycle control, and cytoskeleton motility at toxic and subacute concentrations. J Proteome Res (2010) 0.78
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KlROM2 encodes an essential GEF homologue in Kluyveromyces lactis. Yeast (2003) 0.78
The bHLH transcription factor hand is required for proper wing heart formation in Drosophila. Dev Biol (2013) 0.78
Atomic force microscopy demonstrates that disulfide bridges are required for clustering of the yeast cell wall integrity sensor Wsc1. Langmuir (2011) 0.78
Pathway and time-resolved benzo[a]pyrene toxicity on Hepa1c1c7 cells at toxic and subtoxic exposure. J Proteome Res (2014) 0.77
Internet-mediated physician-patient interaction focusing on extracranial hemangiomas and vascular malformations. Head Neck (2013) 0.77
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Milk and sugar: regulation of cell wall synthesis in the milk yeast Kluyveromyces lactis. Eur J Cell Biol (2011) 0.77
A novel role for the non-catalytic intracellular domain of Neprilysins in muscle physiology. Biol Cell (2012) 0.76
KlRHO1 and KlPKC1 are essential for cell integrity signalling in Kluyveromyces lactis. Microbiology (2006) 0.76
Combination of a proteomics approach and reengineering of meso scale network models for prediction of mode-of-action for tyrosine kinase inhibitors. PLoS One (2013) 0.76
Transcriptional signatures of regulatory and toxic responses to benzo-[a]-pyrene exposure. BMC Genomics (2011) 0.76
A laboratory yeast strain suitable for spirit production. Yeast (2004) 0.76
Localization of lymphatic malformations of the neck. Lymphat Res Biol (2013) 0.76
Evaluation of deoxyhypusine synthase inhibitors targeting BCR-ABL positive leukemias. Invest New Drugs (2012) 0.76
DASS-GUI: a user interface for identification and analysis of significant patterns in non-sequential data. Bioinformatics (2010) 0.75
The significance of incidental brain uptake on 68Ga-DOTATATE PET-CT in neuroendocrine tumour patients. Nucl Med Commun (2016) 0.75
Transoral surgery using a novel single-port flexible endoscope system. Eur Arch Otorhinolaryngol (2014) 0.75
Influence of distributional shape of substance parameters on exposure model output. Risk Anal (2005) 0.75
Fungal cell wall biosynthesis: a view on biodiversity in fungi and application of '-omics'. Yeast (2007) 0.75
ISH ADA-01 Critical role of telomerase in regulating cerebral vascular function and redox environment. J Hypertens (2016) 0.75
Interstitial HDR brachytherapy for advanced recurrent squamous cell carcinoma of the head and neck. Anticancer Res (2013) 0.75
Investigation into mechanisms mediating the inhibitory effect of 1,4-benzodiazepines on mast cells by gene expression profiling. Life Sci (2013) 0.75
Facial weakness in a haemodialysis patient. Lancet (2007) 0.75