Published in J Biotechnol on July 10, 2007
Succinate production in Escherichia coli. Biotechnol J (2011) 0.87
Microbial production of succinic acid using crude and purified glycerol from a Crotalaria juncea based biorefinery. Biotechnol Rep (Amst) (2016) 0.75
Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol. Nat Chem Biol (2011) 3.55
Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation. Proc Natl Acad Sci U S A (2007) 2.43
Systems metabolic engineering of Escherichia coli for L-threonine production. Mol Syst Biol (2007) 2.18
Systems metabolic engineering of microorganisms for natural and non-natural chemicals. Nat Chem Biol (2012) 2.17
Metabolic engineering of Escherichia coli for enhanced production of succinic acid, based on genome comparison and in silico gene knockout simulation. Appl Environ Microbiol (2005) 2.13
Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs. Nat Biotechnol (2013) 1.76
The genome sequence of the capnophilic rumen bacterium Mannheimia succiniciproducens. Nat Biotechnol (2004) 1.64
The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli. BMC Genomics (2011) 1.63
Microbial production of short-chain alkanes. Nature (2013) 1.61
Constraints-based genome-scale metabolic simulation for systems metabolic engineering. Biotechnol Adv (2009) 1.60
Native-sized recombinant spider silk protein produced in metabolically engineered Escherichia coli results in a strong fiber. Proc Natl Acad Sci U S A (2010) 1.51
Integrative genome-scale metabolic analysis of Vibrio vulnificus for drug targeting and discovery. Mol Syst Biol (2011) 1.50
Detection of the most common corneal dystrophies caused by BIGH3 gene point mutations using a multispot gold-capped nanoparticle array chip. Anal Chem (2010) 1.41
Recent advances in reconstruction and applications of genome-scale metabolic models. Curr Opin Biotechnol (2011) 1.41
MetaFluxNet: the management of metabolic reaction information and quantitative metabolic flux analysis. Bioinformatics (2003) 1.40
Comparative multi-omics systems analysis of Escherichia coli strains B and K-12. Genome Biol (2012) 1.37
Metabolic engineering of Escherichia coli for the production of polylactic acid and its copolymers. Biotechnol Bioeng (2010) 1.36
Identification and characterization of a new enoyl coenzyme A hydratase involved in biosynthesis of medium-chain-length polyhydroxyalkanoates in recombinant Escherichia coli. J Bacteriol (2003) 1.35
Genome-scale reconstruction and in silico analysis of the Clostridium acetobutylicum ATCC 824 metabolic network. Appl Microbiol Biotechnol (2008) 1.34
3D macroporous graphene frameworks for supercapacitors with high energy and power densities. ACS Nano (2012) 1.33
Systems biology as a foundation for genome-scale synthetic biology. Curr Opin Biotechnol (2006) 1.31
A method for nanofluidic device prototyping using elastomeric collapse. Proc Natl Acad Sci U S A (2009) 1.30
Application of systems biology for bioprocess development. Trends Biotechnol (2008) 1.30
Complete genome sequence of the metabolically versatile plant growth-promoting endophyte Variovorax paradoxus S110. J Bacteriol (2010) 1.29
Genome-scale analysis of Mannheimia succiniciproducens metabolism. Biotechnol Bioeng (2007) 1.28
Organizational and mutational analysis of a complete FR-008/candicidin gene cluster encoding a structurally related polyene complex. Chem Biol (2003) 1.27
Metabolite essentiality elucidates robustness of Escherichia coli metabolism. Proc Natl Acad Sci U S A (2007) 1.26
Bio-based production of C2-C6 platform chemicals. Biotechnol Bioeng (2012) 1.25
Combined transcriptome and proteome analysis of Escherichia coli during high cell density culture. Biotechnol Bioeng (2003) 1.24
Enhanced butanol production obtained by reinforcing the direct butanol-forming route in Clostridium acetobutylicum. MBio (2012) 1.24
The Escherichia coli proteome: past, present, and future prospects. Microbiol Mol Biol Rev (2006) 1.23
Metabolic engineering of Escherichia coli for the production of cadaverine: a five carbon diamine. Biotechnol Bioeng (2011) 1.21
Genome-based metabolic engineering of Mannheimia succiniciproducens for succinic acid production. Appl Environ Microbiol (2006) 1.21
In silico identification of gene amplification targets for improvement of lycopene production. Appl Environ Microbiol (2010) 1.18
Systems metabolic engineering for chemicals and materials. Trends Biotechnol (2011) 1.17
Proteome-based identification of fusion partner for high-level extracellular production of recombinant proteins in Escherichia coli. Biotechnol Bioeng (2008) 1.16
Patterned multiplex pathogen DNA detection by Au particle-on-wire SERS sensor. Nano Lett (2010) 1.15
Biosynthesis of polylactic acid and its copolymers using evolved propionate CoA transferase and PHA synthase. Biotechnol Bioeng (2010) 1.14
Novel gene members in the Pho regulon of Escherichia coli. FEMS Microbiol Lett (2006) 1.13
BioSilico: an integrated metabolic database system. Bioinformatics (2004) 1.12
Continuous butanol production with reduced byproducts formation from glycerol by a hyper producing mutant of Clostridium pasteurianum. Appl Microbiol Biotechnol (2011) 1.08
Facilitated ion transport in all-solid-state flexible supercapacitors. ACS Nano (2011) 1.08
Metabolite-centric approaches for the discovery of antibacterials using genome-scale metabolic networks. Metab Eng (2009) 1.07
Applications of DNA microarray in disease diagnostics. J Microbiol Biotechnol (2009) 1.07
Towards systems metabolic engineering of microorganisms for amino acid production. Curr Opin Biotechnol (2008) 1.07
Genome-scale metabolic model of methylotrophic yeast Pichia pastoris and its use for in silico analysis of heterologous protein production. Biotechnol J (2010) 1.07
Fermentative production of branched chain amino acids: a focus on metabolic engineering. Appl Microbiol Biotechnol (2010) 1.06
Microbial production of building block chemicals and polymers. Curr Opin Biotechnol (2011) 1.06
Prediction of novel synthetic pathways for the production of desired chemicals. BMC Syst Biol (2010) 1.05
Metabolic engineering of Clostridium acetobutylicum ATCC 824 for isopropanol-butanol-ethanol fermentation. Appl Environ Microbiol (2011) 1.05
Metabolic engineering of Escherichia coli for the production of putrescine: a four carbon diamine. Biotechnol Bioeng (2009) 1.05
DNA microarray-based identification of bacterial and fungal pathogens in bloodstream infections. Mol Cell Probes (2009) 1.04
Enhanced production of insulin-like growth factor I fusion protein in Escherichia coli by coexpression of the down-regulated genes identified by transcriptome profiling. Appl Environ Microbiol (2003) 1.03
Comparison of the extracellular proteomes of Escherichia coli B and K-12 strains during high cell density cultivation. Proteomics (2008) 1.02
Hierarchical hollow spheres of Fe2O3 @polyaniline for lithium ion battery anodes. Adv Mater (2013) 1.02
Genome-scale metabolic network analysis and drug targeting of multi-drug resistant pathogen Acinetobacter baumannii AYE. Mol Biosyst (2009) 1.02
Microporous carbon nanoplates from regenerated silk proteins for supercapacitors. Adv Mater (2013) 1.01
Metabolic engineering of Escherichia coli for the production of 1-propanol. Metab Eng (2012) 1.00
Butanol production from renewable biomass: rediscovery of metabolic pathways and metabolic engineering. Biotechnol J (2011) 1.00
Construction and optimization of synthetic pathways in metabolic engineering. Curr Opin Microbiol (2010) 0.99
Metabolic engineering of Escherichia coli for the production of 5-aminovalerate and glutarate as C5 platform chemicals. Metab Eng (2012) 0.99
Engineering of microorganisms for the production of biofuels and perspectives based on systems metabolic engineering approaches. Biotechnol Adv (2011) 0.98
Excretion of human beta-endorphin into culture medium by using outer membrane protein F as a fusion partner in recombinant Escherichia coli. Appl Environ Microbiol (2002) 0.97
Development of a markerless gene knock-out system for Mannheimia succiniciproducens using a temperature-sensitive plasmid. FEMS Microbiol Lett (2007) 0.97
Metabolic engineering of Clostridium acetobutylicum M5 for highly selective butanol production. Biotechnol J (2009) 0.96
A well-ordered flower-like gold nanostructure for integrated sensors via surface-enhanced Raman scattering. Nanotechnology (2009) 0.96
The proteome of Mannheimia succiniciproducens, a capnophilic rumen bacterium. Proteomics (2006) 0.95
WebCell: a web-based environment for kinetic modeling and dynamic simulation of cellular networks. Bioinformatics (2006) 0.95
Size-selective concentration and label-free characterization of protein aggregates using a Raman active nanofluidic device. Lab Chip (2010) 0.95
The genome-scale metabolic network analysis of Zymomonas mobilis ZM4 explains physiological features and suggests ethanol and succinic acid production strategies. Microb Cell Fact (2010) 0.95
High cell density fed-batch cultivation of Escherichia coli using exponential feeding combined with pH-stat. Bioprocess Biosyst Eng (2004) 0.94
Display of bacterial lipase on the Escherichia coli cell surface by using FadL as an anchoring motif and use of the enzyme in enantioselective biocatalysis. Appl Environ Microbiol (2004) 0.94
Butanol production from renewable biomass by clostridia. Bioresour Technol (2012) 0.94
Protein nanopatterns and biosensors using gold binding polypeptide as a fusion partner. Anal Chem (2006) 0.94
High performance of a solid-state flexible asymmetric supercapacitor based on graphene films. Nanoscale (2012) 0.94
Prediction of metabolic fluxes by incorporating genomic context and flux-converging pattern analyses. Proc Natl Acad Sci U S A (2010) 0.94
Isolation and genetic manipulation of the antibiotic down-regulatory gene, wblA ortholog for doxorubicin-producing Streptomyces strain improvement. Appl Microbiol Biotechnol (2009) 0.93
Biosynthesis of polyhydroxyalkanoates containing 2-hydroxybutyrate from unrelated carbon source by metabolically engineered Escherichia coli. Appl Microbiol Biotechnol (2011) 0.93
Metabolic flux analysis and metabolic engineering of microorganisms. Mol Biosyst (2007) 0.93
Metabolic engineering of Escherichia coli for the production of medium-chain-length polyhydroxyalkanoates rich in specific monomers. FEMS Microbiol Lett (2002) 0.92
Large area flexible SERS active substrates using engineered nanostructures. Nanoscale (2011) 0.92
Development of chemically defined medium for Mannheimia succiniciproducens based on its genome sequence. Appl Microbiol Biotechnol (2008) 0.91
Display of lipase on the cell surface of Escherichia coli using OprF as an anchor and its application to enantioselective resolution in organic solvent. Biotechnol Bioeng (2005) 0.91
In silico prediction and validation of the importance of the Entner-Doudoroff pathway in poly(3-hydroxybutyrate) production by metabolically engineered Escherichia coli. Biotechnol Bioeng (2003) 0.91
Metabolic network modeling and simulation for drug targeting and discovery. Biotechnol J (2011) 0.91
A robust, electrochemically driven microwell drug delivery system for controlled vasopressin release. Biomed Microdevices (2009) 0.91
Colored Petri net modeling and simulation of signal transduction pathways. Metab Eng (2005) 0.91
In silico genome-scale metabolic analysis of Pseudomonas putida KT2440 for polyhydroxyalkanoate synthesis, degradation of aromatics and anaerobic survival. Biotechnol J (2010) 0.91
In vivo synthesis of diverse metal nanoparticles by recombinant Escherichia coli. Angew Chem Int Ed Engl (2010) 0.90
Systems metabolic engineering, industrial biotechnology and microbial cell factories. Microb Cell Fact (2012) 0.90
Advanced bacterial polyhydroxyalkanoates: towards a versatile and sustainable platform for unnatural tailor-made polyesters. Biotechnol Adv (2011) 0.90
Strategies for systems-level metabolic engineering. Biotechnol J (2008) 0.89
Metabolic engineering of Escherichia coli for the production of fumaric acid. Biotechnol Bioeng (2013) 0.89
Engineering Escherichia coli for increased productivity of serine-rich proteins based on proteome profiling. Appl Environ Microbiol (2003) 0.89
Nanogap field-effect transistor biosensors for electrical detection of avian influenza. Small (2009) 0.89
DNA microarray-based detection of nosocomial pathogenic Pseudomonas aeruginosa and Acinetobacter baumannii. Mol Cell Probes (2005) 0.89
Applications of genome-scale metabolic network model in metabolic engineering. J Ind Microbiol Biotechnol (2014) 0.89
Transcriptome analysis of phosphate starvation response in Escherichia coli. J Microbiol Biotechnol (2007) 0.88