Published in Science on December 13, 2007
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A stromal heat shock protein 70 system functions in protein import into chloroplasts in the moss Physcomitrella patens. Plant Cell (2010) 1.46
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A hitchhiker's guide to the MADS world of plants. Genome Biol (2010) 1.42
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Diterpene cyclases and the nature of the isoprene fold. Proteins (2010) 1.41
Unraveling the evolution of auxin signaling. Plant Physiol (2010) 1.41
The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences. BMC Genomics (2010) 1.40
Visualization of auxin-mediated transcriptional activation using a common auxin-responsive reporter system in the liverwort Marchantia polymorpha. J Plant Res (2012) 1.40
SoyDB: a knowledge database of soybean transcription factors. BMC Plant Biol (2010) 1.40
The cellulose synthase superfamily in fully sequenced plants and algae. BMC Plant Biol (2009) 1.40
Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions. BMC Genomics (2013) 1.38
Vacuolar nicotianamine has critical and distinct roles under iron deficiency and for zinc sequestration in Arabidopsis. Plant Cell (2012) 1.33
Genomics and bioinformatics resources for crop improvement. Plant Cell Physiol (2010) 1.33
The heat shock response in moss plants is regulated by specific calcium-permeable channels in the plasma membrane. Plant Cell (2009) 1.33
Unraveling the evolution of cytokinin signaling. Plant Physiol (2009) 1.32
Physcomitrella patens DCL3 is required for 22-24 nt siRNA accumulation, suppression of retrotransposon-derived transcripts, and normal development. PLoS Genet (2008) 1.31
Legume transcription factor genes: what makes legumes so special? Plant Physiol (2009) 1.30
Physcomitrella patens mutants affected on heat dissipation clarify the evolution of photoprotection mechanisms upon land colonization. Proc Natl Acad Sci U S A (2010) 1.30
Minor antenna proteins CP24 and CP26 affect the interactions between photosystem II subunits and the electron transport rate in grana membranes of Arabidopsis. Plant Cell (2008) 1.29
Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom. BMC Bioinformatics (2009) 1.29
SALAD database: a motif-based database of protein annotations for plant comparative genomics. Nucleic Acids Res (2009) 1.29
Morphological evolution in land plants: new designs with old genes. Philos Trans R Soc Lond B Biol Sci (2012) 1.29
Comparative analyses reveal distinct sets of lineage-specific genes within Arabidopsis thaliana. BMC Evol Biol (2010) 1.28
To gibberellins and beyond! Surveying the evolution of (di)terpenoid metabolism. Annu Rev Plant Biol (2014) 1.28
Sirtuin/Sir2 phylogeny, evolutionary considerations and structural conservation. Mol Cells (2009) 1.27
Structure-based discovery and description of plant and animal Helitrons. Proc Natl Acad Sci U S A (2009) 1.27
The evolution of nuclear auxin signalling. BMC Evol Biol (2009) 1.27
How have plant cell walls evolved? Plant Physiol (2010) 1.25
Back to the sea twice: identifying candidate plant genes for molecular evolution to marine life. BMC Evol Biol (2011) 1.25
Auxin Produced by the Indole-3-Pyruvic Acid Pathway Regulates Development and Gemmae Dormancy in the Liverwort Marchantia polymorpha. Plant Cell (2015) 1.24
The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet. Proc Natl Acad Sci U S A (2009) 1.23
In silico comparative analysis of SSR markers in plants. BMC Plant Biol (2011) 1.23
In silico and biochemical analysis of Physcomitrella patens photosynthetic antenna: identification of subunits which evolved upon land adaptation. PLoS One (2008) 1.23
Plant centromeric retrotransposons: a structural and cytogenetic perspective. Mob DNA (2011) 1.21
Complex chloroplast RNA metabolism: just debugging the genetic programme? BMC Biol (2008) 1.21
Pervasive horizontal transfer of rolling-circle transposons among animals. Genome Biol Evol (2010) 1.21
Evolution and function of the plant cell wall synthesis-related glycosyltransferase family 8. Plant Physiol (2010) 1.20
Exploring the mechanism of Physcomitrella patens desiccation tolerance through a proteomic strategy. Plant Physiol (2009) 1.19
The polyphenol oxidase gene family in land plants: Lineage-specific duplication and expansion. BMC Genomics (2012) 1.19
Evolution of plant sucrose uptake transporters. Front Plant Sci (2012) 1.18
The emerging importance of type I MADS box transcription factors for plant reproduction. Plant Cell (2011) 1.18
Expansive evolution of the trehalose-6-phosphate phosphatase gene family in Arabidopsis. Plant Physiol (2012) 1.16
The N-DRC forms a conserved biochemical complex that maintains outer doublet alignment and limits microtubule sliding in motile axonemes. Mol Biol Cell (2013) 1.14
The GreenCut2 resource, a phylogenomically derived inventory of proteins specific to the plant lineage. J Biol Chem (2011) 1.14
Green transcription factors: a chlamydomonas overview. Genetics (2008) 1.13
Strigolactone regulation of shoot branching in chrysanthemum (Dendranthema grandiflorum). J Exp Bot (2010) 1.13
Evolution of the B3 DNA binding superfamily: new insights into REM family gene diversification. PLoS One (2009) 1.13
Evolutionary origins of STIM1 and STIM2 within ancient Ca2+ signaling systems. Trends Cell Biol (2011) 1.12
Oil bodies and oleosins in Physcomitrella possess characteristics representative of early trends in evolution. Plant Physiol (2009) 1.11
Plasma membrane-targeted PIN proteins drive shoot development in a moss. Curr Biol (2014) 1.11
The molecular and physiological responses of Physcomitrella patens to ultraviolet-B radiation. Plant Physiol (2010) 1.11
ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet B-sensing pathway. Plant Physiol (2009) 1.10
RNA editing: only eleven sites are present in the Physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal. Mol Genet Genomics (2009) 1.09
Phytochrome diversity in green plants and the origin of canonical plant phytochromes. Nat Commun (2015) 1.09
Molecular and phylogenetic characterization of the sieve element occlusion gene family in Fabaceae and non-Fabaceae plants. BMC Plant Biol (2010) 1.09
The chloroplast protein translocation complexes of Chlamydomonas reinhardtii: a bioinformatic comparison of Toc and Tic components in plants, green algae and red algae. Genetics (2008) 1.09
New evidence for grain specific C4 photosynthesis in wheat. Sci Rep (2016) 1.09
Brachytic2/ZmABCB1 functions in IAA export from intercalary meristems. J Exp Bot (2010) 1.07
Physcomitrella cyclin-dependent kinase A links cell cycle reactivation to other cellular changes during reprogramming of leaf cells. Plant Cell (2011) 1.06
At the poles across kingdoms: phosphoinositides and polar tip growth. Protoplasma (2009) 1.06
Initial sequencing and comparative analysis of the mouse genome. Nature (2002) 96.15
Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes. Science (2002) 20.59
The B73 maize genome: complexity, diversity, and dynamics. Science (2009) 18.73
SMART 5: domains in the context of genomes and networks. Nucleic Acids Res (2006) 17.13
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea. Nature (2009) 15.06
The Sorghum bicolor genome and the diversification of grasses. Nature (2009) 14.62
Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes. DNA Res (2007) 13.08
Frequent pathway mutations of splicing machinery in myelodysplasia. Nature (2011) 11.44
The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science (2007) 11.15
The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science (2002) 11.11
A unified classification system for eukaryotic transposable elements. Nat Rev Genet (2007) 11.03
Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes. Nature (2008) 10.11
The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Science (2004) 9.97
Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization. Science (2007) 9.79
The F-box protein TIR1 is an auxin receptor. Nature (2005) 9.45
Ledipasvir and sofosbuvir for previously treated HCV genotype 1 infection. N Engl J Med (2014) 9.45
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Daclatasvir plus sofosbuvir for previously treated or untreated chronic HCV infection. N Engl J Med (2014) 9.25
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Automatic annotation of organellar genomes with DOGMA. Bioinformatics (2004) 8.70
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science (2003) 8.65
Sofosbuvir for hepatitis C genotype 2 or 3 in patients without treatment options. N Engl J Med (2013) 8.49
Mechanism of auxin perception by the TIR1 ubiquitin ligase. Nature (2007) 8.21
The genome of the domesticated apple (Malus × domestica Borkh.). Nat Genet (2010) 8.07
The amphioxus genome and the evolution of the chordate karyotype. Nature (2008) 8.03
Complete sequencing and characterization of 21,243 full-length human cDNAs. Nat Genet (2003) 7.98
The European database on small subunit ribosomal RNA. Nucleic Acids Res (2002) 7.80
A plant miRNA contributes to antibacterial resistance by repressing auxin signaling. Science (2006) 7.74
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods. Nat Methods (2007) 7.73
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite. Nature (2007) 7.42
Mapping human genetic diversity in Asia. Science (2009) 7.40
Identification of ALK as a major familial neuroblastoma predisposition gene. Nature (2008) 7.38
Opinion: Re-evaluating prokaryotic species. Nat Rev Microbiol (2005) 7.19
Integrative annotation of 21,037 human genes validated by full-length cDNA clones. PLoS Biol (2004) 7.17
Gene discovery and annotation using LCM-454 transcriptome sequencing. Genome Res (2006) 7.10
Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science (2006) 6.74
The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature (2008) 6.70
The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans. Nature (2008) 6.69
An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics. Plant Mol Biol (2003) 6.57
A transcription factor response element for gene expression during circadian night. Nature (2002) 6.55
The ecoresponsive genome of Daphnia pulex. Science (2011) 6.55
Two rounds of whole genome duplication in the ancestral vertebrate. PLoS Biol (2005) 6.46
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucleic Acids Res (2002) 6.43
Response-guided telaprevir combination treatment for hepatitis C virus infection. N Engl J Med (2011) 6.31
Comparative genomics identifies a flagellar and basal body proteome that includes the BBS5 human disease gene. Cell (2004) 6.10
The wheat VRN2 gene is a flowering repressor down-regulated by vernalization. Science (2004) 5.86
The genome of woodland strawberry (Fragaria vesca). Nat Genet (2010) 5.86
The medaka draft genome and insights into vertebrate genome evolution. Nature (2007) 5.77
Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas. N Engl J Med (2015) 5.71