Published in Nucleic Acids Res on January 04, 2008
Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis. BMC Bioinformatics (2010) 7.78
Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics (2013) 6.62
A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data. Nucleic Acids Res (2009) 3.50
Evaluating gene expression in C57BL/6J and DBA/2J mouse striatum using RNA-Seq and microarrays. PLoS One (2011) 3.01
Alzheimer's disease: early alterations in brain DNA methylation at ANK1, BIN1, RHBDF2 and other loci. Nat Neurosci (2014) 2.85
Optimizing the noise versus bias trade-off for Illumina whole genome expression BeadChips. Nucleic Acids Res (2010) 2.47
ETS2 and ERG promote megakaryopoiesis and synergize with alterations in GATA-1 to immortalize hematopoietic progenitor cells. Blood (2009) 2.45
Pro-inflammatory CD11c+CD206+ adipose tissue macrophages are associated with insulin resistance in human obesity. Diabetes (2010) 2.35
Brain expression genome-wide association study (eGWAS) identifies human disease-associated variants. PLoS Genet (2012) 2.23
Modulation of the osteosarcoma expression phenotype by microRNAs. PLoS One (2012) 2.06
Statistical methods of background correction for Illumina BeadArray data. Bioinformatics (2009) 1.99
A risk haplotype of STAT4 for systemic lupus erythematosus is over-expressed, correlates with anti-dsDNA and shows additive effects with two risk alleles of IRF5. Hum Mol Genet (2008) 1.98
Genome-wide mRNA expression correlates of viral control in CD4+ T-cells from HIV-1-infected individuals. PLoS Pathog (2010) 1.90
A novel variant on chromosome 7q22.3 associated with mean platelet volume, counts, and function. Blood (2009) 1.85
Interplay of host microbiota, genetic perturbations, and inflammation promotes local development of intestinal neoplasms in mice. J Exp Med (2014) 1.76
Extracellular signal-regulated kinase signaling pathway regulates breast cancer cell migration by maintaining slug expression. Cancer Res (2009) 1.74
Mouse genome-wide association and systems genetics identify Asxl2 as a regulator of bone mineral density and osteoclastogenesis. PLoS Genet (2011) 1.68
Gene networks and microRNAs implicated in aggressive prostate cancer. Cancer Res (2009) 1.68
Early patterns of gene expression correlate with the humoral immune response to influenza vaccination in humans. J Infect Dis (2011) 1.67
VAMP8/endobrevin is overexpressed in hyperreactive human platelets: suggested role for platelet microRNA. J Thromb Haemost (2009) 1.54
Bicc1 is a genetic determinant of osteoblastogenesis and bone mineral density. J Clin Invest (2014) 1.53
Comparison of normalization methods for Illumina BeadChip HumanHT-12 v3. BMC Genomics (2010) 1.50
Interactions between glucocorticoid treatment and cis-regulatory polymorphisms contribute to cellular response phenotypes. PLoS Genet (2011) 1.49
Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity. Nat Commun (2014) 1.49
A defined Oct4 level governs cell state transitions of pluripotency entry and differentiation into all embryonic lineages. Nat Cell Biol (2013) 1.45
GATA-2 reinforces megakaryocyte development in the absence of GATA-1. Mol Cell Biol (2009) 1.44
Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction. BMC Genomics (2015) 1.43
Anti-CD3 treatment up-regulates programmed cell death protein-1 expression on activated effector T cells and severely impairs their inflammatory capacity. Immunology (2017) 1.41
RUNX1 induces DNA replication independent of active DNA demethylation at SPI1 regulatory regions. BMC Mol Biol (2017) 1.38
Integrative genomic analysis of the human immune response to influenza vaccination. Elife (2013) 1.37
JAK/STAT3 signalling is sufficient and dominant over antagonistic cues for the establishment of naive pluripotency. Nat Commun (2012) 1.37
Genome-wide transcriptional profiling reveals microRNA-correlated genes and biological processes in human lymphoblastoid cell lines. PLoS One (2009) 1.35
Cellular response of polyvalent oligonucleotide-gold nanoparticle conjugates. ACS Nano (2010) 1.33
Integrated functional, gene expression and genomic analysis for the identification of cancer targets. PLoS One (2009) 1.33
FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions. Genome Biol (2009) 1.32
Analyzing illumina gene expression microarray data from different tissues: methodological aspects of data analysis in the metaxpress consortium. PLoS One (2012) 1.31
Angiogenic mRNA and microRNA gene expression signature predicts a novel subtype of serous ovarian cancer. PLoS One (2012) 1.31
Spike-in validation of an Illumina-specific variance-stabilizing transformation. BMC Res Notes (2008) 1.28
Human papillomavirus deregulates the response of a cellular network comprising of chemotactic and proinflammatory genes. PLoS One (2011) 1.26
miR-139-5p is a regulator of metastatic pathways in breast cancer. RNA (2013) 1.25
Genome-wide analysis of Ollier disease: Is it all in the genes? Orphanet J Rare Dis (2011) 1.24
The contrasting roles of PPARδ and PPARγ in regulating the metabolic switch between oxidation and storage of fats in white adipose tissue. Genome Biol (2011) 1.22
Recurrent mutations, including NPM1c, activate a BRD4-dependent core transcriptional program in acute myeloid leukemia. Leukemia (2013) 1.22
Statistical colocalization of monocyte gene expression and genetic risk variants for type 1 diabetes. Hum Mol Genet (2012) 1.20
Combined deletion of Fxr and Shp in mice induces Cyp17a1 and results in juvenile onset cholestasis. J Clin Invest (2010) 1.17
Conjunctival transcriptome in scarring trachoma. Infect Immun (2010) 1.15
Integrative analysis reveals relationships of genetic and epigenetic alterations in osteosarcoma. PLoS One (2012) 1.13
Toll-like receptor 4 signaling augments transforming growth factor-β responses: a novel mechanism for maintaining and amplifying fibrosis in scleroderma. Am J Pathol (2012) 1.11
BeadArray expression analysis using bioconductor. PLoS Comput Biol (2011) 1.11
Regulation of hematopoietic stem cells by their mature progeny. Proc Natl Acad Sci U S A (2010) 1.09
A human genome-wide screen for regulators of clathrin-coated vesicle formation reveals an unexpected role for the V-ATPase. Nat Cell Biol (2013) 1.09
Imperfect centered miRNA binding sites are common and can mediate repression of target mRNAs. Genome Biol (2014) 1.08
Illumina WG-6 BeadChip strips should be normalized separately. BMC Bioinformatics (2009) 1.08
Transcriptional changes in response to X chromosome dosage in the mouse: implications for X inactivation and the molecular basis of Turner Syndrome. BMC Genomics (2010) 1.06
Inactivating CUX1 mutations promote tumorigenesis. Nat Genet (2013) 1.06
Genome-wide analysis of primary CD4+ and CD8+ T cell transcriptomes shows evidence for a network of enriched pathways associated with HIV disease. Retrovirology (2011) 1.06
Sex-biased methylome and transcriptome in human prefrontal cortex. Hum Mol Genet (2013) 1.06
Association of MAPT haplotypes with Alzheimer's disease risk and MAPT brain gene expression levels. Alzheimers Res Ther (2014) 1.06
MicroRNA-182-5p targets a network of genes involved in DNA repair. RNA (2012) 1.06
Genome-wide DNA methylation indicates silencing of tumor suppressor genes in uterine leiomyoma. PLoS One (2012) 1.05
Genetic effects at pleiotropic loci are context-dependent with consequences for the maintenance of genetic variation in populations. PLoS Genet (2011) 1.05
Molecular profiling of cutaneous squamous cell carcinomas and actinic keratoses from organ transplant recipients. BMC Cancer (2013) 1.04
High-throughput 3D screening reveals differences in drug sensitivities between culture models of JIMT1 breast cancer cells. PLoS One (2013) 1.04
Conserved molecular interactions within the HBO1 acetyltransferase complexes regulate cell proliferation. Mol Cell Biol (2011) 1.03
Gene expression analysis of rheumatoid arthritis synovial lining regions by cDNA microarray combined with laser microdissection: up-regulation of inflammation-associated STAT1, IRF1, CXCL9, CXCL10, and CCL5. Scand J Rheumatol (2012) 1.03
Glutathione S-transferase omega genes in Alzheimer and Parkinson disease risk, age-at-diagnosis and brain gene expression: an association study with mechanistic implications. Mol Neurodegener (2012) 1.02
COLOMBOS v2.0: an ever expanding collection of bacterial expression compendia. Nucleic Acids Res (2013) 1.02
Down-regulation of the oncogene cyclin D1 increases migratory capacity in breast cancer and is linked to unfavorable prognostic features. Am J Pathol (2010) 1.02
Gene expression profiling of immune-competent human cells exposed to engineered zinc oxide or titanium dioxide nanoparticles. PLoS One (2013) 1.02
Whole blood transcriptional profiling in ankylosing spondylitis identifies novel candidate genes that might contribute to the inflammatory and tissue-destructive disease aspects. Arthritis Res Ther (2011) 1.01
The early growth response gene Egr2 (Alias Krox20) is a novel transcriptional target of transforming growth factor-β that is up-regulated in systemic sclerosis and mediates profibrotic responses. Am J Pathol (2011) 1.00
Expression of cyclophilin B is associated with malignant progression and regulation of genes implicated in the pathogenesis of breast cancer. Am J Pathol (2008) 1.00
Genome-wide progesterone receptor binding: cell type-specific and shared mechanisms in T47D breast cancer cells and primary leiomyoma cells. PLoS One (2012) 0.99
MiR-25 regulates Wwp2 and Fbxw7 and promotes reprogramming of mouse fibroblast cells to iPSCs. PLoS One (2012) 0.99
PLZF expression maps the early stages of ILC1 lineage development. Proc Natl Acad Sci U S A (2015) 0.99
Egr-1 induces a profibrotic injury/repair gene program associated with systemic sclerosis. PLoS One (2011) 0.97
The germ cell determinant Blimp1 is not required for derivation of pluripotent stem cells. Cell Stem Cell (2012) 0.97
Gene expression in brain and liver produced by three different regimens of alcohol consumption in mice: comparison with immune activation. PLoS One (2013) 0.96
Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. Mol Psychiatry (2013) 0.96
Reprogramming capacity of Nanog is functionally conserved in vertebrates and resides in a unique homeodomain. Development (2011) 0.96
Reciprocal regulation of microRNA and mRNA profiles in neuronal development and synapse formation. BMC Genomics (2009) 0.96
Loss of LSD1 (lysine-specific demethylase 1) suppresses growth and alters gene expression of human colon cancer cells in a p53- and DNMT1(DNA methyltransferase 1)-independent manner. Biochem J (2013) 0.96
Lifetime stress accelerates epigenetic aging in an urban, African American cohort: relevance of glucocorticoid signaling. Genome Biol (2015) 0.96
Voluntary wheel running reverses age-induced changes in hippocampal gene expression. PLoS One (2011) 0.94
Testing the silence of mutations: Transcriptomic and behavioral studies of GABA(A) receptor α1 and α2 subunit knock-in mice. Neurosci Lett (2010) 0.94
Vpu-deficient HIV strains stimulate innate immune signaling responses in target cells. J Virol (2012) 0.93
Prognostic parameters in uveal melanoma and their association with BAP1 expression. Br J Ophthalmol (2014) 0.93
Early growth response 3 (Egr-3) is induced by transforming growth factor-β and regulates fibrogenic responses. Am J Pathol (2013) 0.92
MicroRNA paraffin-based studies in osteosarcoma reveal reproducible independent prognostic profiles at 14q32. Genome Med (2013) 0.92
A review of statistical methods for preprocessing oligonucleotide microarrays. Stat Methods Med Res (2009) 0.92
Generalized unmixing model for multispectral flow cytometry utilizing nonsquare compensation matrices. Cytometry A (2013) 0.92
Wnt-Lrp5 signaling regulates fatty acid metabolism in the osteoblast. Mol Cell Biol (2015) 0.92
Transcriptional analysis reveals gender-specific changes in the aging of the human immune system. PLoS One (2013) 0.92
Genome-wide analysis of transcriptional reprogramming in mouse models of acute myeloid leukaemia. PLoS One (2011) 0.91
Identification of microRNAs inhibiting TGF-β-induced IL-11 production in bone metastatic breast cancer cells. PLoS One (2012) 0.91
The effect of dietary fat intake on hepatic gene expression in LG/J AND SM/J mice. BMC Genomics (2014) 0.90
Human IFNAR2 deficiency: Lessons for antiviral immunity. Sci Transl Med (2015) 0.90
Network analysis of a Pkd1-mouse model of autosomal dominant polycystic kidney disease identifies HNF4α as a disease modifier. PLoS Genet (2012) 0.90
A point mutation, E95D, in the mumps virus V protein disengages STAT3 targeting from STAT1 targeting. J Virol (2009) 0.90
Response of the mouse lung transcriptome to welding fume: effects of stainless and mild steel fumes on lung gene expression in A/J and C57BL/6J mice. Respir Res (2010) 0.90
Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol (2004) 101.91
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics (2003) 82.89
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet (2001) 63.36
Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Res (2003) 52.74
Variance stabilization applied to microarray data calibration and to the quantification of differential expression. Bioinformatics (2002) 20.59
A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes. Bioinformatics (2001) 16.47
A comparison of background correction methods for two-colour microarrays. Bioinformatics (2007) 8.59
Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset. Genome Biol (2005) 8.32
A model for measurement error for gene expression arrays. J Comput Biol (2001) 5.58
A variance-stabilizing transformation for gene-expression microarray data. Bioinformatics (2002) 5.44
Experimental comparison and cross-validation of the Affymetrix and Illumina gene expression analysis platforms. Nucleic Acids Res (2005) 4.41
A novel, high-performance random array platform for quantitative gene expression profiling. Genome Res (2004) 4.32
Approximate variance-stabilizing transformations for gene-expression microarray data. Bioinformatics (2003) 2.20
nuID: a universal naming scheme of oligonucleotides for illumina, affymetrix, and other microarrays. Biol Direct (2007) 2.05
Estimation of transformation parameters for microarray data. Bioinformatics (2003) 1.73
A model of technical variation of microarray signals. J Comput Biol (2006) 1.61
At what scale should microarray data be analyzed? Am J Pharmacogenomics (2004) 1.14
Bioconductor: open software development for computational biology and bioinformatics. Genome Biol (2004) 143.19
Differential expression analysis for sequence count data. Genome Biol (2010) 64.56
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol (2014) 27.48
Enterotypes of the human gut microbiome. Nature (2011) 24.36
lumi: a pipeline for processing Illumina microarray. Bioinformatics (2008) 17.19
A high-resolution map of transcription in the yeast genome. Proc Natl Acad Sci U S A (2006) 11.81
Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes. Nature (2010) 9.95
BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis. Bioinformatics (2005) 9.84
Variation in transcription factor binding among humans. Science (2010) 9.33
Bidirectional promoters generate pervasive transcription in yeast. Nature (2009) 9.29
Software for computing and annotating genomic ranges. PLoS Comput Biol (2013) 8.20
Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis. BMC Bioinformatics (2010) 7.78
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models. Nat Biotechnol (2010) 7.08
Detecting differential usage of exons from RNA-seq data. Genome Res (2012) 6.34
High-resolution mapping of meiotic crossovers and non-crossovers in yeast. Nature (2008) 6.10
arrayQualityMetrics--a bioconductor package for quality assessment of microarray data. Bioinformatics (2008) 5.95
A global map of human gene expression. Nat Biotechnol (2010) 5.32
Independent filtering increases detection power for high-throughput experiments. Proc Natl Acad Sci U S A (2010) 5.21
Annotating the human genome with Disease Ontology. BMC Genomics (2009) 4.71
Count-based differential expression analysis of RNA sequencing data using R and Bioconductor. Nat Protoc (2013) 4.00
Analysis of cell-based RNAi screens. Genome Biol (2006) 3.99
The genomic and transcriptomic landscape of a HeLa cell line. G3 (Bethesda) (2013) 3.82
Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt. Nat Protoc (2009) 3.77
Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching. Bioinformatics (2006) 3.34
Addressing accuracy and precision issues in iTRAQ quantitation. Mol Cell Proteomics (2010) 3.10
Expression Atlas update--a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments. Nucleic Acids Res (2013) 2.97
dictyBase--a Dictyostelium bioinformatics resource update. Nucleic Acids Res (2008) 2.75
Ringo--an R/Bioconductor package for analyzing ChIP-chip readouts. BMC Bioinformatics (2007) 2.50
Mapping of signaling networks through synthetic genetic interaction analysis by RNAi. Nat Methods (2011) 2.47
dictyBase, the model organism database for Dictyostelium discoideum. Nucleic Acids Res (2006) 2.45
EBImage--an R package for image processing with applications to cellular phenotypes. Bioinformatics (2010) 2.42
From disease ontology to disease-ontology lite: statistical methods to adapt a general-purpose ontology for the test of gene-ontology associations. Bioinformatics (2009) 2.37
Importing ArrayExpress datasets into R/Bioconductor. Bioinformatics (2009) 2.17
Genomics of human intracranial aneurysm wall. Stroke (2009) 2.06
Directional tissue migration through a self-generated chemokine gradient. Nature (2013) 2.06
Tandem fluorescent protein timers for in vivo analysis of protein dynamics. Nat Biotechnol (2012) 2.06
nuID: a universal naming scheme of oligonucleotides for illumina, affymetrix, and other microarrays. Biol Direct (2007) 2.05
Clustering phenotype populations by genome-wide RNAi and multiparametric imaging. Mol Syst Biol (2010) 2.03
arrayMagic: two-colour cDNA microarray quality control and preprocessing. Bioinformatics (2004) 2.02
Highly coordinated proteome dynamics during reprogramming of somatic cells to pluripotency. Cell Rep (2012) 1.84
Antisense expression increases gene expression variability and locus interdependency. Mol Syst Biol (2011) 1.83
Mapping genetic interactions in human cancer cells with RNAi and multiparametric phenotyping. Nat Methods (2013) 1.72
Argatroban therapy for heparin-induced thrombocytopenia in ICU patients with multiple organ dysfunction syndrome: a retrospective study. Crit Care (2010) 1.63
An Optogenetic Method to Modulate Cell Contractility during Tissue Morphogenesis. Dev Cell (2015) 1.59
dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa. Nucleic Acids Res (2010) 1.54
Auditory evoked potentials compared with bispectral index for monitoring of midazolam and propofol sedation during colonoscopy. Am J Gastroenterol (2009) 1.53
Incidence of acute pancreatitis does not increase during Oktoberfest, but is higher than previously described in Germany. Clin Gastroenterol Hepatol (2011) 1.52
High-resolution transcription atlas of the mitotic cell cycle in budding yeast. Genome Biol (2010) 1.51
Comparison of normalization methods for Illumina BeadChip HumanHT-12 v3. BMC Genomics (2010) 1.50
A compendium to ensure computational reproducibility in high-dimensional classification tasks. Stat Appl Genet Mol Biol (2004) 1.48
Relating CNVs to transcriptome data at fine resolution: assessment of the effect of variant size, type, and overlap with functional regions. Genome Res (2011) 1.42
dictyBase: a new Dictyostelium discoideum genome database. Nucleic Acids Res (2004) 1.42
What is mzXML good for? Expert Rev Proteomics (2005) 1.39
Large-scale mutagenesis of the mouse to understand the genetic bases of nervous system structure and function. Brain Res Mol Brain Res (2004) 1.36
Assessing affymetrix GeneChip microarray quality. BMC Bioinformatics (2011) 1.36
Other riffs on cooperation are already showing how well a wiki could work. Nature (2007) 1.34
A collection of bioconductor methods to visualize gene-list annotations. BMC Res Notes (2010) 1.33
In situ analysis of cross-hybridisation on microarrays and the inference of expression correlation. BMC Bioinformatics (2007) 1.32
Mining biomedical data using MetaMap Transfer (MMtx) and the Unified Medical Language System (UMLS). Methods Mol Biol (2007) 1.31
DictyBase 2013: integrating multiple Dictyostelid species. Nucleic Acids Res (2012) 1.31
Genome-wide analysis of mRNA decay patterns during early Drosophila development. Genome Biol (2010) 1.31
Systematic analysis of T7 RNA polymerase based in vitro linear RNA amplification for use in microarray experiments. BMC Genomics (2004) 1.25
Microarray data quality control improves the detection of differentially expressed genes. Genomics (2010) 1.25
The case for strategic international alliances to harness nutritional genomics for public and personal health. Br J Nutr (2005) 1.24
Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size. Bioinformatics (2013) 1.23
Genome-wide allele- and strand-specific expression profiling. Mol Syst Biol (2009) 1.20
Continuous venovenous hemodialysis with regional citrate anticoagulation in patients with liver failure: a prospective observational study. Crit Care (2012) 1.19
Making the most of high-throughput protein-interaction data. Genome Biol (2007) 1.17
DNA methylation profiling defines clinically relevant biological subsets of non-small cell lung cancer. Clin Cancer Res (2012) 1.16
Top-down standards will not serve systems biology. Nature (2006) 1.15
Coverage and error models of protein-protein interaction data by directed graph analysis. Genome Biol (2007) 1.15
Food-derived peroxidized fatty acids may trigger hepatic inflammation: a novel hypothesis to explain steatohepatitis. J Hepatol (2013) 1.14
Gene expression in kidney cancer is associated with cytogenetic abnormalities, metastasis formation, and patient survival. Clin Cancer Res (2005) 1.13
Comparative analysis of structured RNAs in S. cerevisiae indicates a multitude of different functions. BMC Biol (2007) 1.12
Organelle proteomics experimental designs and analysis. Proteomics (2010) 1.12
Gene expression and functional studies of the optic nerve head astrocyte transcriptome from normal African Americans and Caucasian Americans donors. PLoS One (2008) 1.11
The Disease and Gene Annotations (DGA): an annotation resource for human disease. Nucleic Acids Res (2012) 1.11
Multi-domain protein families and domain pairs: comparison with known structures and a random model of domain recombination. J Struct Funct Genomics (2003) 1.10
Enhancement of antitumor properties of TRAIL by targeted delivery to the tumor neovasculature. Mol Cancer Ther (2008) 1.10
Statistical methods and software for the analysis of highthroughput reverse genetic assays using flow cytometry readouts. Genome Biol (2006) 1.10
Genomic organization of transcriptomes in mammals: Coregulation and cofunctionality. Genomics (2007) 1.09
Combinatorial effects of four histone modifications in transcription and differentiation. Genomics (2007) 1.09
From ORFeome to biology: a functional genomics pipeline. Genome Res (2004) 1.08
Risk of arterial catheter infections: do meta-analyses carry forward obsolete data? Crit Care Med (2014) 1.07
Genome-wide DNA methylation indicates silencing of tumor suppressor genes in uterine leiomyoma. PLoS One (2012) 1.05
The LIFEdb database in 2006. Nucleic Acids Res (2006) 1.04
cAMP response element-binding protein is a primary hub of activity-driven neuronal gene expression. J Neurosci (2011) 1.04
Physical examination, central venous pressure, and chest radiography for the prediction of transpulmonary thermodilution-derived hemodynamic parameters in critically ill patients: a prospective trial. J Crit Care (2011) 1.03
Rintact: enabling computational analysis of molecular interaction data from the IntAct repository. Bioinformatics (2007) 1.02
Alternative polyadenylation diversifies post-transcriptional regulation by selective RNA-protein interactions. Mol Syst Biol (2014) 1.01
The early growth response gene Egr2 (Alias Krox20) is a novel transcriptional target of transforming growth factor-β that is up-regulated in systemic sclerosis and mediates profibrotic responses. Am J Pathol (2011) 1.00
Expression of cyclophilin B is associated with malignant progression and regulation of genes implicated in the pathogenesis of breast cancer. Am J Pathol (2008) 1.00
Diverse modes of genomic alteration in hepatocellular carcinoma. Genome Biol (2014) 0.99
Carbon dioxide versus room air for natural orifice transluminal endoscopic surgery (NOTES) and comparison with standard laparoscopic pneumoperitoneum. Gastrointest Endosc (2010) 0.97
Visual presentation as a welcome alternative to textual presentation of gene annotation information. Adv Exp Med Biol (2010) 0.97
Egr-1 induces a profibrotic injury/repair gene program associated with systemic sclerosis. PLoS One (2011) 0.97