Published in Mol Biochem Parasitol on March 19, 2008
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The RNA helicase DHH1 is central to the correct expression of many developmentally regulated mRNAs in trypanosomes. J Cell Sci (2010) 1.06
SMN-assisted assembly of snRNP-specific Sm cores in trypanosomes. Genes Dev (2009) 0.99
Arabidopsis thaliana LSM proteins function in mRNA splicing and degradation. Nucleic Acids Res (2013) 0.98
Trypanosoma brucei spliced leader RNA maturation by the cap 1 2'-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex. Mol Cell Biol (2008) 0.95
Establishment of an in vitro trans-splicing system in Trypanosoma brucei that requires endogenous spliced leader RNA. Nucleic Acids Res (2010) 0.93
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Trypanosome spliced-leader-associated RNA (SLA1) localization and implications for spliced-leader RNA biogenesis. Eukaryot Cell (2008) 0.91
The hnRNP F/H homologue of Trypanosoma brucei is differentially expressed in the two life cycle stages of the parasite and regulates splicing and mRNA stability. Nucleic Acids Res (2013) 0.90
Basal splicing factors regulate the stability of mature mRNAs in trypanosomes. J Biol Chem (2013) 0.88
Two splicing factors carrying serine-arginine motifs, TSR1 and TSR1IP, regulate splicing, mRNA stability, and rRNA processing in Trypanosoma brucei. RNA Biol (2014) 0.83
snRNA-specific role of SMN in trypanosome snRNP biogenesis in vivo. RNA Biol (2011) 0.79
The spliceosomal PRP19 complex of trypanosomes. Mol Microbiol (2015) 0.76
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The ApaH-like phosphatase TbALPH1 is the major mRNA decapping enzyme of trypanosomes. PLoS Pathog (2017) 0.75
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The shaping and functional consequences of the microRNA landscape in breast cancer. Nature (2013) 2.22
The transcriptome of the human pathogen Trypanosoma brucei at single-nucleotide resolution. PLoS Pathog (2010) 2.15
NuRD-mediated deacetylation of H3K27 facilitates recruitment of Polycomb Repressive Complex 2 to direct gene repression. EMBO J (2011) 2.09
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The trypanosomatid signal recognition particle consists of two RNA molecules, a 7SL RNA homologue and a novel tRNA-like molecule. J Biol Chem (2003) 1.23
Silencing of Sm proteins in Trypanosoma brucei by RNA interference captured a novel cytoplasmic intermediate in spliced leader RNA biogenesis. J Biol Chem (2003) 1.22
RNA interference of signal peptide-binding protein SRP54 elicits deleterious effects and protein sorting defects in trypanosomes. J Biol Chem (2002) 1.20
Multiple roles for polypyrimidine tract binding (PTB) proteins in trypanosome RNA metabolism. RNA (2009) 1.19
ALA induced photodynamic effects on gram positive and negative bacteria. Photochem Photobiol Sci (2004) 1.16
A unique megaplasmid contributes to stress tolerance and pathogenicity of an emergent Salmonella enterica serovar Infantis strain. Environ Microbiol (2014) 1.14
Persistent ER stress induces the spliced leader RNA silencing pathway (SLS), leading to programmed cell death in Trypanosoma brucei. PLoS Pathog (2010) 1.13
On the role of exon and intron sequences in trans-splicing utilization and cap 4 modification of the trypanosomatid Leptomonas collosoma SL RNA. J Biol Chem (2002) 1.11
Small nucleolar RNA interference induced by antisense or double-stranded RNA in trypanosomatids. Proc Natl Acad Sci U S A (2003) 1.06
Small nucleolar RNAs that guide modification in trypanosomatids: repertoire, targets, genome organisation, and unique functions. Int J Parasitol (2004) 1.04
Identification of novel snRNA-specific Sm proteins that bind selectively to U2 and U4 snRNAs in Trypanosoma brucei. RNA (2006) 1.03
Identification and functional characterization of lsm proteins in Trypanosoma brucei. J Biol Chem (2004) 1.02
Spliced-leader RNA silencing: a novel stress-induced mechanism in Trypanosoma brucei. EMBO Rep (2007) 1.02
The Trypanosoma brucei signal recognition particle lacks the Alu-domain-binding proteins: purification and functional analysis of its binding proteins by RNAi. J Cell Sci (2005) 1.00
Natural killer cell tolerance persists despite significant reduction of self MHC class I on normal target cells in mice. PLoS One (2010) 0.96
Elucidating the role of H/ACA-like RNAs in trans-splicing and rRNA processing via RNA interference silencing of the Trypanosoma brucei CBF5 pseudouridine synthase. J Biol Chem (2005) 0.95
Blocking variant surface glycoprotein synthesis in Trypanosoma brucei triggers a general arrest in translation initiation. PLoS One (2009) 0.94
Families of H/ACA ncRNA molecules in trypanosomatids. RNA Biol (2009) 0.94
Analysis of spliceosomal complexes in Trypanosoma brucei and silencing of two splicing factors Prp31 and Prp43. Mol Biochem Parasitol (2005) 0.94
Probing natural killer cell education by Ly49 receptor expression analysis and computational modelling in single MHC class I mice. PLoS One (2009) 0.93
Establishment of an in vitro trans-splicing system in Trypanosoma brucei that requires endogenous spliced leader RNA. Nucleic Acids Res (2010) 0.93
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Elucidating the role of C/D snoRNA in rRNA processing and modification in Trypanosoma brucei. Eukaryot Cell (2007) 0.91
Trypanosome spliced-leader-associated RNA (SLA1) localization and implications for spliced-leader RNA biogenesis. Eukaryot Cell (2008) 0.91
The hnRNP F/H homologue of Trypanosoma brucei is differentially expressed in the two life cycle stages of the parasite and regulates splicing and mRNA stability. Nucleic Acids Res (2013) 0.90
Genome-wide characterization of Foxa2 targets reveals upregulation of floor plate genes and repression of ventrolateral genes in midbrain dopaminergic progenitors. Development (2012) 0.89
Role of protein translocation pathways across the endoplasmic reticulum in Trypanosoma brucei. J Biol Chem (2008) 0.89
RNAi interference of XPO1 and Sm genes and their effect on the spliced leader RNA in Trypanosoma brucei. Mol Biochem Parasitol (2006) 0.89
RNAspa: a shortest path approach for comparative prediction of the secondary structure of ncRNA molecules. BMC Bioinformatics (2007) 0.89
Basal splicing factors regulate the stability of mature mRNAs in trypanosomes. J Biol Chem (2013) 0.88
Genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in Leishmania major indicates conservation among trypanosomatids in the repertoire and in their rRNA targets. Eukaryot Cell (2006) 0.88
Yeast linker histone Hho1p is required for efficient RNA polymerase I processivity and transcriptional silencing at the ribosomal DNA. Proc Natl Acad Sci U S A (2008) 0.87
'RNA walk' a novel approach to study RNA-RNA interactions between a small RNA and its target. Nucleic Acids Res (2009) 0.85
Functional characterization and protein-protein interactions of trypanosome splicing factors U2AF35, U2AF65 and SF1. Mol Biochem Parasitol (2009) 0.85
Small nucleolar RNA interference in Trypanosoma brucei: mechanism and utilization for elucidating the function of snoRNAs. Nucleic Acids Res (2010) 0.84
Psiscan: a computational approach to identify H/ACA-like and AGA-like non-coding RNA in trypanosomatid genomes. BMC Bioinformatics (2008) 0.84
Natural history of five children with surfactant protein C mutations and interstitial lung disease. Pediatr Pulmonol (2013) 0.84
Small nucleolar RNA clusters in trypanosomatid Leptomonas collosoma. Genome organization, expression studies, and the potential role of sequences present upstream from the first repeated cluster. J Biol Chem (2003) 0.83
Simulations of the NK cell immune synapse reveal that activation thresholds can be established by inhibitory receptors acting locally. J Immunol (2011) 0.83
Human African trypanosomiasis in a traveler: diagnostic pitfalls. Am J Trop Med Hyg (2012) 0.83
Down-regulation of the trypanosomatid signal recognition particle affects the biogenesis of polytopic membrane proteins but not of signal peptide-containing proteins. Eukaryot Cell (2007) 0.80
The Trypanosoma brucei telomerase RNA (TER) homologue binds core proteins of the C/D snoRNA family. FEBS Lett (2013) 0.80
Silica nanoparticles and polyethyleneimine (PEI)-mediated functionalization: a new method of PEI covalent attachment for siRNA delivery applications. Bioconjug Chem (2013) 0.80
snRNA-specific role of SMN in trypanosome snRNP biogenesis in vivo. RNA Biol (2011) 0.79
Determination of molecular markers for BRCA1 and BRCA2 heterozygosity using gene expression profiling. Cancer Prev Res (Phila) (2013) 0.78
Induction of ER stress response leading to programmed cell death in Trypanosoma brucei. Methods Enzymol (2011) 0.78
A comparative genome-wide study of ncRNAs in trypanosomatids. BMC Genomics (2010) 0.78
Tetracycline nanoparticles as antibacterial and gene-silencing agents. Adv Healthc Mater (2014) 0.78
A rapid method for detection of putative RNAi target genes in genomic data. Bioinformatics (2003) 0.78
RNAMAT: an efficient method to detect classes of RNA molecules and their structural features. Conf Proc IEEE Eng Med Biol Soc (2004) 0.77
Functional analysis of noncoding RNAs in trypanosomes: RNA walk, a novel approach to study RNA-RNA interactions between small RNA and its target. Methods Mol Biol (2011) 0.76
Acute in vivo toxicity mitigation of PEI-coated maghemite nanoparticles using controlled oxidation and surface modifications toward siRNA delivery. ACS Appl Mater Interfaces (2015) 0.76
Homozygous MED25 mutation implicated in eye-intellectual disability syndrome. Hum Genet (2015) 0.76
Stabilizing RNA by the sonochemical formation of RNA nanospheres. Small (2011) 0.75
Eosinophilia, pneumonia and hypogammaglobulinemia. Pediatr Infect Dis J (2005) 0.75
Timing and nature of wheezing at the endpoint of a bronchial challenge in preschool children. Pediatr Pulmonol (2005) 0.75
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Microspheres of mixed proteins. Chemistry (2010) 0.75
Laryngeal obstruction in congenital plasminogen deficiency. Pediatr Pulmonol (2012) 0.75
Sonochemical synthesis of DNA nanospheres. Chembiochem (2011) 0.75
Real-time quantification of protein expression and translocation at individual cell resolution using imaging-dish-based live cell array. Anal Bioanal Chem (2014) 0.75