Published in PLoS Genet on May 23, 2008
Genes mirror geography within Europe. Nature (2008) 14.23
Reconstructing Indian population history. Nature (2009) 9.28
Inference of population structure using dense haplotype data. PLoS Genet (2012) 4.87
Inference of population splits and mixtures from genome-wide allele frequency data. PLoS Genet (2012) 4.85
Global distribution of genomic diversity underscores rich complex history of continental human populations. Genome Res (2009) 2.76
Genomic ancestry of North Africans supports back-to-Africa migrations. PLoS Genet (2012) 2.51
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The fine-scale genetic structure of the British population. Nature (2015) 2.26
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Out of Africa: modern human origins special feature: explaining worldwide patterns of human genetic variation using a coalescent-based serial founder model of migration outward from Africa. Proc Natl Acad Sci U S A (2009) 1.76
Learning about human population history from ancient and modern genomes. Nat Rev Genet (2011) 1.74
Dating the age of admixture via wavelet transform analysis of genome-wide data. Genome Biol (2011) 1.65
Analysis of East Asia genetic substructure using genome-wide SNP arrays. PLoS One (2008) 1.65
A worldwide survey of human male demographic history based on Y-SNP and Y-STR data from the HGDP-CEPH populations. Mol Biol Evol (2009) 1.56
Understanding the origin of species with genome-scale data: modelling gene flow. Nat Rev Genet (2013) 1.41
An accurate sequentially Markov conditional sampling distribution for the coalescent with recombination. Genetics (2011) 1.27
Autosomal and X-linked single nucleotide polymorphisms reveal a steep Asian-Melanesian ancestry cline in eastern Indonesia and a sex bias in admixture rates. Proc Biol Sci (2010) 1.26
Reconciling migration models to the Americas with the variation of North American native mitogenomes. Proc Natl Acad Sci U S A (2013) 1.23
Climate shaped the worldwide distribution of human mitochondrial DNA sequence variation. Proc Biol Sci (2009) 1.20
Genome-wide diversity in the levant reveals recent structuring by culture. PLoS Genet (2013) 1.20
Evidence that two main bottleneck events shaped modern human genetic diversity. Proc Biol Sci (2009) 1.11
Toward a new history and geography of human genes informed by ancient DNA. Trends Genet (2014) 1.07
An approximate likelihood for genetic data under a model with recombination and population splitting. Theor Popul Biol (2009) 1.07
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Joint estimation of gene conversion rates and mean conversion tract lengths from population SNP data. Bioinformatics (2009) 1.06
A sequentially Markov conditional sampling distribution for structured populations with migration and recombination. Theor Popul Biol (2012) 1.03
Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference. PLoS Genet (2015) 1.03
Genomic tools for evolution and conservation in the chimpanzee: Pan troglodytes ellioti is a genetically distinct population. PLoS Genet (2012) 1.00
Whole-genome sequencing data offer insights into human demography. Nat Genet (2011) 0.90
Inference from samples of DNA sequences using a two-locus model. J Comput Biol (2011) 0.86
Blockwise HMM computation for large-scale population genomic inference. Bioinformatics (2012) 0.83
Recent acquisition of Helicobacter pylori by Baka pygmies. PLoS Genet (2013) 0.83
The peopling of the African continent and the diaspora into the new world. Curr Opin Genet Dev (2014) 0.79
Two molecular measures of relatedness based on haplotype sharing. BMC Bioinformatics (2015) 0.79
A probabilistic method for testing and estimating selection differences between populations. Genome Res (2015) 0.76
Spatial and temporal simulation of human evolution. Methods, frameworks and applications. Curr Genomics (2014) 0.76
Na Li and Matthew Stephens on Modeling Linkage Disequilibrium. Genetics (2016) 0.75
Inferring population structure and demographic history using Y-STR data from worldwide populations. Mol Genet Genomics (2014) 0.75
The Genetic Legacy of Zoroastrianism in Iran and India: Insights into Population Structure, Gene Flow, and Selection. Am J Hum Genet (2017) 0.75
Inference of population structure using multilocus genotype data. Genetics (2000) 147.76
On the number of segregating sites in genetical models without recombination. Theor Popul Biol (1975) 60.96
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Generating samples under a Wright-Fisher neutral model of genetic variation. Bioinformatics (2002) 34.50
Genetic structure of human populations. Science (2002) 30.91
A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase. Am J Hum Genet (2006) 28.32
A fine-scale map of recombination rates and hotspots across the human genome. Science (2005) 26.82
Worldwide human relationships inferred from genome-wide patterns of variation. Science (2008) 22.44
Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data. Genetics (2003) 17.73
The fine-scale structure of recombination rate variation in the human genome. Science (2004) 17.05
Genotype, haplotype and copy-number variation in worldwide human populations. Nature (2008) 12.40
Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa. Proc Natl Acad Sci U S A (2005) 10.22
A worldwide survey of haplotype variation and linkage disequilibrium in the human genome. Nat Genet (2006) 8.46
The allele frequency spectrum in genome-wide human variation data reveals signals of differential demographic history in three large world populations. Genetics (2004) 7.00
Single, rapid coastal settlement of Asia revealed by analysis of complete mitochondrial genomes. Science (2005) 6.86
Clines, clusters, and the effect of study design on the inference of human population structure. PLoS Genet (2005) 6.73
Demic expansions and human evolution. Science (1993) 5.59
Genetic variation and population structure in native Americans. PLoS Genet (2007) 4.87
Geography predicts neutral genetic diversity of human populations. Curr Biol (2005) 4.74
Genetic analysis of African populations: human evolution and complex disease. Nat Rev Genet (2002) 4.23
Genetic perspectives on human origins and differentiation. Annu Rev Genomics Hum Genet (2000) 4.01
Where the crossovers are: recombination distributions in mammals. Nat Rev Genet (2004) 3.82
A geographically explicit genetic model of worldwide human-settlement history. Am J Hum Genet (2006) 3.81
The mtDNA legacy of the Levantine early Upper Palaeolithic in Africa. Science (2006) 2.98
Y genetic data support the Neolithic demic diffusion model. Proc Natl Acad Sci U S A (2002) 2.97
Modern humans did not admix with Neanderthals during their range expansion into Europe. PLoS Biol (2004) 2.83
Revealing the prehistoric settlement of Australia by Y chromosome and mtDNA analysis. Proc Natl Acad Sci U S A (2007) 2.55
msHOT: modifying Hudson's ms simulator to incorporate crossover and gene conversion hotspots. Bioinformatics (2006) 2.45
Human demographic history: refining the recent African origin model. Curr Opin Genet Dev (2002) 2.00
The genetic legacy of western Bantu migrations. Hum Genet (2005) 1.62
A novel method with improved power to detect recombination hotspots from polymorphism data reveals multiple hotspots in human genes. Am J Hum Genet (2005) 1.39
Mitochondrial DNA affinities at the Atlantic fringe of Europe. Am J Phys Anthropol (2003) 1.26
Timing of a back-migration into Africa. Science (2007) 1.04
A covariance structure model for the admixture of binary genetic variation. Genetics (2007) 0.83
A map of human genome variation from population-scale sequencing. Nature (2010) 121.13
A second generation human haplotype map of over 3.1 million SNPs. Nature (2007) 85.39
An integrated map of genetic variation from 1,092 human genomes. Nature (2012) 59.82
The variant call format and VCFtools. Bioinformatics (2011) 25.88
Genome-wide detection and characterization of positive selection in human populations. Nature (2007) 17.27
Sex and virulence in Escherichia coli: an evolutionary perspective. Mol Microbiol (2006) 14.53
Genes mirror geography within Europe. Nature (2008) 14.23
A global reference for human genetic variation. Nature (2015) 12.85
Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls. Nature (2010) 12.27
Inferring weak population structure with the assistance of sample group information. Mol Ecol Resour (2009) 10.81
Inference of population structure using multilocus genotype data: dominant markers and null alleles. Mol Ecol Notes (2007) 10.11
A common sequence motif associated with recombination hot spots and genome instability in humans. Nat Genet (2008) 8.64
Inference of bacterial microevolution using multilocus sequence data. Genetics (2006) 7.93
Genome-wide patterns of population structure and admixture in West Africans and African Americans. Proc Natl Acad Sci U S A (2009) 5.39
Composition, variability, and temporal stability of the intestinal microbiota of the elderly. Proc Natl Acad Sci U S A (2010) 5.02
Inference of population structure using dense haplotype data. PLoS Genet (2012) 4.87
Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication. Nature (2010) 4.64
Classic selective sweeps were rare in recent human evolution. Science (2011) 4.09
A simple genetic architecture underlies morphological variation in dogs. PLoS Biol (2010) 3.46
Bayesian refinement of association signals for 14 loci in 3 common diseases. Nat Genet (2012) 3.31
Colloquium paper: genome-wide patterns of population structure and admixture among Hispanic/Latino populations. Proc Natl Acad Sci U S A (2010) 3.20
Sequence typing and comparison of population biology of Campylobacter coli and Campylobacter jejuni. J Clin Microbiol (2005) 2.88
Distinguishing human ethnic groups by means of sequences from Helicobacter pylori: lessons from Ladakh. Proc Natl Acad Sci U S A (2004) 2.83
Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel. Nat Genet (2012) 2.78
Campylobacter genotyping to determine the source of human infection. Clin Infect Dis (2009) 2.70
A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: convergence or divergence by homologous recombination? Genome Res (2006) 2.62
Origin of extant domesticated sunflowers in eastern North America. Nature (2004) 2.59
Complex population structure in African village dogs and its implications for inferring dog domestication history. Proc Natl Acad Sci U S A (2009) 2.42
Convergence of Campylobacter species: implications for bacterial evolution. Science (2008) 2.42
Multiple instances of ancient balancing selection shared between humans and chimpanzees. Science (2013) 2.32
Host-associated genetic import in Campylobacter jejuni. Emerg Infect Dis (2007) 2.28
Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis. Proc Natl Acad Sci U S A (2012) 2.22
Helicobacter pylori genome evolution during human infection. Proc Natl Acad Sci U S A (2011) 2.15
Microevolution of Helicobacter pylori during prolonged infection of single hosts and within families. PLoS Genet (2010) 1.89
Inference of homologous recombination in bacteria using whole-genome sequences. Genetics (2010) 1.85
Population genetic inference from personal genome data: impact of ancestry and admixture on human genomic variation. Am J Hum Genet (2012) 1.75
Hybrid Vibrio vulnificus. Emerg Infect Dis (2005) 1.68
Recombination and population structure in Salmonella enterica. PLoS Genet (2011) 1.61
Evolution of pathogenicity in the Bacillus cereus group. Syst Appl Microbiol (2009) 1.52
Genome-wide association study identifies vitamin B5 biosynthesis as a host specificity factor in Campylobacter. Proc Natl Acad Sci U S A (2013) 1.47
Thyroid cancer susceptibility polymorphisms: confirmation of loci on chromosomes 9q22 and 14q13, validation of a recessive 8q24 locus and failure to replicate a locus on 5q24. J Med Genet (2012) 1.44
Progressive genome-wide introgression in agricultural Campylobacter coli. Mol Ecol (2012) 1.37
Natural transformation of helicobacter pylori involves the integration of short DNA fragments interrupted by gaps of variable size. PLoS Pathog (2009) 1.35
Inferring genomic flux in bacteria. Genome Res (2008) 1.25
Impact of homologous and non-homologous recombination in the genomic evolution of Escherichia coli. BMC Genomics (2012) 1.23
Germs, genomes and genealogies. Trends Ecol Evol (2004) 1.21
Genomic changes during chronic Helicobacter pylori infection. J Bacteriol (2006) 1.20
Genealogical typing of Neisseria meningitidis. Microbiology (2009) 1.16
Mosaic DNA imports with interspersions of recipient sequence after natural transformation of Helicobacter pylori. PLoS One (2008) 1.16
Plastic cells and populations: DNA substrate characteristics in Helicobacter pylori transformation define a flexible but conservative system for genomic variation. FASEB J (2007) 1.11
Population identification using genetic data. Annu Rev Genomics Hum Genet (2012) 1.05
Candidate genes and functional noncoding variants identified in a canine model of obsessive-compulsive disorder. Genome Biol (2014) 1.04
Phylogenetic distribution of traits associated with plant colonization in Escherichia coli. Environ Microbiol (2012) 1.02
Ethnic and geographic differentiation of Helicobacter pylori within Iran. PLoS One (2010) 0.98
Human genomic regions with exceptionally high levels of population differentiation identified from 911 whole-genome sequences. Genome Biol (2014) 0.98
SimMLST: simulation of multi-locus sequence typing data under a neutral model. Bioinformatics (2009) 0.97
Enhanced maternal origin of the 22q11.2 deletion in velocardiofacial and DiGeorge syndromes. Am J Hum Genet (2013) 0.96
Australin: a chromosomal passenger protein required specifically for Drosophila melanogaster male meiosis. J Cell Biol (2008) 0.92
The Kalash Genetic Isolate? The Evidence for Recent Admixture. Am J Hum Genet (2016) 0.89
Haplotype background, repeat length evolution, and Huntington's disease. Am J Hum Genet (2009) 0.88
Recent acquisition of Helicobacter pylori by Baka pygmies. PLoS Genet (2013) 0.83
Correction: Rapid evolution of distinct Helicobacter pylori subpopulations in the Americas. PLoS Genet (2017) 0.75