Non-classical hydrogen bonds in interleukins: the role of C-H...O interactions.

PubWeight™: 0.75‹?›

🔗 View Article (PMID 18824192)

Published in Int J Biol Macromol on September 10, 2008

Authors

Sudha Anand1, Anand Anbarasu, Rao Sethumadhavan

Author Affiliations

1: Bioinformatics & Computational Biology Division, School of Biotechnology, Chemical & Biomedical Engineering, Vellore Institute of Technology, Thiruvalam Road, Vellore 632014, India.

Articles by these authors

Septicaemic melioidosis in a tertiary care hospital in south India. Indian J Med Res (2003) 1.54

Flavonoid from Carica papaya inhibits NS2B-NS3 protease and prevents Dengue 2 viral assembly. Bioinformation (2013) 1.12

In silico investigation of molecular mechanism of laminopathy caused by a point mutation (R482W) in lamin A/C protein. Amino Acids (2011) 1.08

Identification and in silico analysis of functional SNPs of the BRCA1 gene. Genomics (2007) 1.06

Drug resistance mechanism of PncA in Mycobacterium tuberculosis. J Biomol Struct Dyn (2013) 1.04

AKT kinase pathway: a leading target in cancer research. ScientificWorldJournal (2013) 1.01

CEP proteins: the knights of centrosome dynasty. Protoplasma (2013) 0.92

Studies on adaptability of binding residues and flap region of TMC-114 resistance HIV-1 protease mutants. J Biomol Struct Dyn (2011) 0.92

Relationship between mutation of serine residue at 315th position in M. tuberculosis catalase-peroxidase enzyme and Isoniazid susceptibility: an in silico analysis. J Mol Model (2010) 0.90

Investigation on the role of nsSNPs in HNPCC genes--a bioinformatics approach. J Biomed Sci (2009) 0.90

Evidence of colorectal cancer-associated mutation in MCAK: a computational report. Cell Biochem Biophys (2013) 0.89

Computational SNP analysis: current approaches and future prospects. Cell Biochem Biophys (2014) 0.89

Effect of deleterious nsSNP on the HER2 receptor based on stability and binding affinity with herceptin: a computational approach. C R Biol (2008) 0.86

Identification and structural comparison of deleterious mutations in nsSNPs of ABL1 gene in chronic myeloid leukemia: a bio-informatics study. J Biomed Inform (2007) 0.84

Investigation of binding phenomenon of NSP3 and p130Cas mutants and their effect on cell signalling. Cell Biochem Biophys (2013) 0.84

Molecular dynamic simulation reveals damaging impact of RAC1 F28L mutation in the switch I region. PLoS One (2013) 0.83

Molecular dynamics and molecular docking studies on E166A point mutant, R274N/R276N double mutant, and E166A/R274N/R276N triple mutant forms of class A β-lactamases. J Biomol Struct Dyn (2013) 0.83

Relationship between a point mutation S97C in CK1δ protein and its affect on ATP-binding affinity. J Biomol Struct Dyn (2013) 0.82

Mutational analysis of FUS gene and its structural and functional role in amyotrophic lateral sclerosis 6. J Biomol Struct Dyn (2014) 0.82

In silico analysis of structural and functional consequences in p16INK4A by deleterious nsSNPs associated CDKN2A gene in malignant melanoma. Biochimie (2008) 0.82

In silico prediction of a disease-associated STIL mutant and its affect on the recruitment of centromere protein J (CENPJ). FEBS Open Bio (2012) 0.81

Structural basis for the resilience of Darunavir (TMC114) resistance major flap mutations of HIV-1 protease. Interdiscip Sci (2009) 0.81

Molecular docking and molecular dynamics studies on β-lactamases and penicillin binding proteins. Mol Biosyst (2014) 0.81

Prioritization of candidate SNPs in colon cancer using bioinformatics tools: an alternative approach for a cancer biologist. Interdiscip Sci (2010) 0.81

Exploring the cause of drug resistance by the detrimental missense mutations in KIT receptor: computational approach. Amino Acids (2010) 0.81

Exploring the role of cation-pi interactions in glycoproteins lipid-binding proteins and RNA-binding proteins. J Theor Biol (2007) 0.81

In-silico screening of cancer associated mutation on PLK1 protein and its structural consequences. J Mol Model (2013) 0.80

Computational investigation of cancer-associated molecular mechanism in Aurora A (S155R) mutation. Cell Biochem Biophys (2013) 0.80

Computational and structural investigation of deleterious functional SNPs in breast cancer BRCA2 gene. Sheng Wu Gong Cheng Xue Bao (2008) 0.80

Influence of C-H...pi hydrogen bonds in interleukins. In Silico Biol (2008) 0.79

Investigations on C-H...pi interactions in RNA binding proteins. Int J Biol Macromol (2007) 0.78

Identifying therapeutic template by evaluating the structural stability of gram positive anti-bacterial peptides--a computational approach. Interdiscip Sci (2011) 0.78

Evolution driven structural changes in CENP-E motor domain. Interdiscip Sci (2013) 0.78

Indirect immunofluorescent antibody test for the rapid diagnosis of melioidosis. Indian J Med Res (2003) 0.78

In silico identification of significant detrimental missense mutations of EGFR and their effect with 4-anilinoquinazoline-based drugs. Appl Biochem Biotechnol (2009) 0.78

Effect of Gestational Exposure of Cypermethrin on Postnatal Development of Brain Cytochrome P450 2D1 and 3A1 and Neurotransmitter Receptors. Mol Neurobiol (2014) 0.77

Analysis of binding residues between scorpion neurotoxins and D2 dopamine receptor: a computational docking study. Comput Biol Med (2008) 0.77

Roadmap to determine the point mutations involved in cardiomyopathy disorder: a Bayesian approach. Gene (2013) 0.77

Imprinting of cerebral and hepatic cytochrome p450s in rat offsprings exposed prenatally to low doses of cypermethrin. Mol Neurobiol (2013) 0.77

Tryptophan to Glycine mutation in the position 116 leads to protein aggregation and decreases the stability of the LITAF protein. J Biomol Struct Dyn (2014) 0.77

Identifying novel oncogenes: a machine learning approach. Interdiscip Sci (2014) 0.77

Exploring the role of C-H....pi interactions on the structural stability of single chain "all-alpha" proteins. Appl Biochem Biotechnol (2009) 0.77

A compact review on the comparison of conventional and non-conventional interactions on the structural stability of therapeutic proteins. Interdiscip Sci (2011) 0.76

Cation-π interactions in β-lactamases: the role in structural stability. Cell Biochem Biophys (2013) 0.76

Exploring the C-H...O interactions in glycoproteins. Appl Biochem Biotechnol (2009) 0.76

π-π Interactions in structural stability: role in RNA binding proteins. Cell Biochem Biophys (2013) 0.76

Influence of cation-pi interactions on RNA-binding proteins. Int J Biol Macromol (2006) 0.76

Influence of cation-pi interactions to the structural stability of prokaryotic and eukaryotic translation elongation factors. Protoplasma (2009) 0.76

In silico analysis reveals the anti-malarial potential of quinolinyl chalcone derivatives. J Biomol Struct Dyn (2014) 0.76

In silico identification of catalytic residues in azobenzene reductase from Bacillus subtilis and its docking studies with azo dyes. Interdiscip Sci (2009) 0.76

Exploring the structural and functional effect of pRB by significant nsSNP in the coding region of RB1 gene causing retinoblastoma. Sci China Life Sci (2010) 0.76

Structural stability studies in adhesion molecules--role of cation-π interactions. Protoplasma (2010) 0.76

Computational and structural analysis of deleterious functional SNPs in ARNT oncogene. Interdiscip Sci (2009) 0.76

Non-canonical H-bonds in β-lactamases: importance of C-H···π interactions. J Biol Inorg Chem (2013) 0.76

β-Keto esters from ketones and ethyl chloroformate: a rapid, general, efficient synthesis of pyrazolones and their antimicrobial, in silico and in vitro cytotoxicity studies. Org Med Chem Lett (2013) 0.75

Arginine and Lysine interactions with π residues in metalloproteins. Bioinformation (2012) 0.75

Influence of C-H...O interactions on the structural stability of β-lactamases. J Biol Phys (2013) 0.75

Aromatic-aromatic interactions: analysis of π-π interactions in interleukins and TNF proteins. Bioinformation (2013) 0.75

Computational identification and structural analysis of deleterious functional SNPs in MLL gene causing acute leukemia. Interdiscip Sci (2010) 0.75

In silico investigations on functional and haplotype tag SNPs associated with congenital long QT syndromes (LQTSs). Genomic Med (2009) 0.75

Analysis of non-synonymous single-nucleotide polymorphisms and population variability of PLD2 gene associated with hypertension. Int J Bioinform Res Appl (2013) 0.75

Regioselective Synthesis of 2-Chloroquinoline Based Ethyl 4-(3- Hydroxyphenyl)-2,7,7-Trimethyl-5-Oxo-1,4,5,6,7,8-Hexahydroquinoline-3- Carboxylates and their In-Silico Evaluation Against P. falciparum Lactate Dehydrogenase. Med Chem (2015) 0.75

Evaluation and comparison of radical scavenging properties of solvent extracts from Justicia adhatoda leaf using DPPH assay. Appl Biochem Biotechnol (2014) 0.75

Contribution of unconventional C-H...O bonds to the structural stability of antimicrobial peptides. Interdiscip Sci (2009) 0.75

Electrostatic potential studies as a consequence of cation-π interaction in cytochrome c fold of alpha proteins. Interdiscip Sci (2012) 0.75

Role of centrosome in regulating immune response. Curr Drug Targets (2014) 0.75

Structure-function studies on non-synonymous SNPs of chemokine receptor gene implicated in cardiovascular disease: a computational approach. Protein J (2013) 0.75

Distinct role of non-covalent interactions to the function and structural stability of glutaredoxins: a multifunctional redox protein. Int J Bioinform Res Appl (2010) 0.75

Detection and confirmation of alkaloids in leaves of Justicia adhatoda and bioinformatics approach to elicit its anti-tuberculosis activity. Appl Biochem Biotechnol (2012) 0.75

Investigations on the interactions of scorpion neurotoxins with the predicted structure of D1 dopamine receptor by protein-protein docking method. A bioinformatics approach. C R Biol (2008) 0.75

Exploring the structural stability of a potential antifungal peptide through computational analysis. Protein Pept Lett (2009) 0.75

Computational detection of deleterious SNPs and their effect on sequence and structural level of the VHL gene. Mamm Genome (2008) 0.75

Erratum to: Effect of Gestational Exposure of Cypermethrin on Postnatal Development of Brain Cytochrome P450 2D1 and 3A1 and Neurotransmitter Receptors. Mol Neurobiol (2015) 0.75