Published in Nucleic Acids Res on May 08, 2009
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MapZ marks the division sites and positions FtsZ rings in Streptococcus pneumoniae. Nature (2014) 1.48
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Two essential arginine residues in the T components of energy-coupling factor transporters. J Bacteriol (2009) 1.22
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Understanding specificity of the mycosin proteases in ESX/type VII secretion by structural and functional analysis. J Struct Biol (2013) 0.92
Topological analysis of Hedgehog acyltransferase, a multipalmitoylated transmembrane protein. J Biol Chem (2014) 0.92
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Architectural organization of the metabolic regulatory enzyme ghrelin O-acyltransferase. J Biol Chem (2013) 0.91
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The flagellar protein FliL is essential for swimming in Rhodobacter sphaeroides. J Bacteriol (2010) 0.90
N-terminal transmembrane domain of SUR1 controls gating of Kir6.2 by modulating channel sensitivity to PIP2. J Gen Physiol (2011) 0.90
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Differential regulation of staphylococcal virulence by the sensor kinase SaeS in response to neutrophil-derived stimuli. Proc Natl Acad Sci U S A (2014) 0.90
Mycobacterium tuberculosis vitamin K epoxide reductase homologue supports vitamin K-dependent carboxylation in mammalian cells. Antioxid Redox Signal (2011) 0.88
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The cytoplasmic domain of varicella-zoster virus glycoprotein H regulates syncytia formation and skin pathogenesis. PLoS Pathog (2014) 0.88
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Subdued, a TMEM16 family Ca²⁺-activated Cl⁻channel in Drosophila melanogaster with an unexpected role in host defense. Elife (2013) 0.88
Regulation of multispanning membrane protein topology via post-translational annealing. Elife (2015) 0.88
Distribution of the SELMA translocon in secondary plastids of red algal origin and predicted uncoupling of ubiquitin-dependent translocation from degradation. Eukaryot Cell (2012) 0.88
TMPad: an integrated structural database for helix-packing folds in transmembrane proteins. Nucleic Acids Res (2011) 0.87
Deletion of a cation transporter promotes lysis in Streptococcus pneumoniae. Infect Immun (2011) 0.87
Proteomic analysis of Plasmodium in the mosquito: progress and pitfalls. Parasitology (2012) 0.87
Transcriptome-based identification of ABC transporters in the western tarnished plant bug Lygus hesperus. PLoS One (2014) 0.87
Subcellular localization of extracytoplasmic proteins in monoderm bacteria: rational secretomics-based strategy for genomic and proteomic analyses. PLoS One (2012) 0.87
MavN is a Legionella pneumophila vacuole-associated protein required for efficient iron acquisition during intracellular growth. Proc Natl Acad Sci U S A (2015) 0.86
The lipid-modifying multiple peptide resistance factor is an oligomer consisting of distinct interacting synthase and flippase subunits. MBio (2015) 0.86
The Pseudomonas aeruginosa PA14 ABC Transporter NppA1A2BCD Is Required for Uptake of Peptidyl Nucleoside Antibiotics. J Bacteriol (2015) 0.86
Repeat-swap homology modeling of secondary active transporters: updated protocol and prediction of elevator-type mechanisms. Front Pharmacol (2015) 0.86
Membrane topology of hedgehog acyltransferase. J Biol Chem (2014) 0.86
A novel family of soluble minimal scaffolds provides structural insight into the catalytic domains of integral membrane metallopeptidases. J Biol Chem (2013) 0.86
Identification of putative potassium channel homologues in pathogenic protozoa. PLoS One (2012) 0.85
Evolutionary classification of ammonium, nitrate, and peptide transporters in land plants. BMC Evol Biol (2014) 0.85
Alanyl-phosphatidylglycerol and lysyl-phosphatidylglycerol are translocated by the same MprF flippases and have similar capacities to protect against the antibiotic daptomycin in Staphylococcus aureus. Antimicrob Agents Chemother (2012) 0.85
Reactive oxygen species-inducible ECF σ factors of Bradyrhizobium japonicum. PLoS One (2012) 0.85
The EXS Domain of PHO1 Participates in the Response of Shoots to Phosphate Deficiency via a Root-to-Shoot Signal. Plant Physiol (2015) 0.85
Inhibition of the sole type I signal peptidase of Mycobacterium tuberculosis is bactericidal under replicating and nonreplicating conditions. J Bacteriol (2012) 0.85
Functional Annotation Analytics of Rhodopseudomonas palustris Genomes. Bioinform Biol Insights (2011) 0.85
Structure of subcomplex Iβ of mammalian respiratory complex I leads to new supernumerary subunit assignments. Proc Natl Acad Sci U S A (2015) 0.85
Comparative mitochondrial genomics and phylogenetic relationships of the Crossoptilon species (Phasianidae, Galliformes). BMC Genomics (2015) 0.84
ProQM-resample: improved model quality assessment for membrane proteins by limited conformational sampling. Bioinformatics (2014) 0.84
Topological analysis of a haloacid permease of a Burkholderia sp. bacterium with a PhoA-LacZ reporter. BMC Microbiol (2009) 0.84
Cytosolic entry of Shiga-like toxin a chain from the yeast endoplasmic reticulum requires catalytically active Hrd1p. PLoS One (2012) 0.84
Mycobacterium tuberculosis DosR regulon gene Rv0079 encodes a putative, 'dormancy associated translation inhibitor (DATIN)'. PLoS One (2012) 0.83
Characterization of mitochondrial mRNAs in codfish reveals unique features compared to mammals. Curr Genet (2011) 0.83
Expression and analysis of two novel rat organic cation transporter homologs, SLC22A17 and SLC22A23. Mol Cell Biochem (2011) 0.83
Genetic analysis of Mps3 SUN domain mutants in Saccharomyces cerevisiae reveals an interaction with the SUN-like protein Slp1. G3 (Bethesda) (2012) 0.83
Analysis of MreB interactors in Chlamydia reveals a RodZ homolog but fails to detect an interaction with MraY. Front Microbiol (2014) 0.83
CONS-COCOMAPS: a novel tool to measure and visualize the conservation of inter-residue contacts in multiple docking solutions. BMC Bioinformatics (2012) 0.83
Evolutionary relationships of ATP-Binding Cassette (ABC) uptake porters. BMC Microbiol (2013) 0.83
Analysis of nucleotide diversity among alleles of the major bacterial blight resistance gene Xa27 in cultivars of rice (Oryza sativa) and its wild relatives. Planta (2013) 0.83
Genome-wide identification of rubber tree (Hevea brasiliensis Muell. Arg.) aquaporin genes and their response to ethephon stimulation in the laticifer, a rubber-producing tissue. BMC Genomics (2015) 0.82
Reliability of nine programs of topological predictions and their application to integral membrane channel and carrier proteins. J Mol Microbiol Biotechnol (2014) 0.82
Plasmids of raw milk cheese isolate Lactococcus lactis subsp. lactis biovar diacetylactis DPC3901 suggest a plant-based origin for the strain. Appl Environ Microbiol (2011) 0.82
Conserved gating elements in TRPC4 and TRPC5 channels. J Biol Chem (2013) 0.82
Random mutagenesis and topology analysis of the autoinducing peptide biosynthesis proteins in Staphylococcus aureus. Mol Microbiol (2012) 0.82
A c subunit with four transmembrane helices and one ion (Na+)-binding site in an archaeal ATP synthase: implications for c ring function and structure. J Biol Chem (2012) 0.82
Proteomic analysis of the Plasmodium male gamete reveals the key role for glycolysis in flagellar motility. Malar J (2014) 0.82
The pCri System: a vector collection for recombinant protein expression and purification. PLoS One (2014) 0.82
Homology modeling, molecular dynamic simulation, and docking based binding site analysis of human dopamine (D4) receptor. J Mol Model (2015) 0.82
L-alanine-induced germination in Bacillus licheniformis -the impact of native gerA sequences. BMC Microbiol (2014) 0.82
Evidence for a novel gene associated with human influenza A viruses. Virol J (2009) 0.81
A wheat ABC transporter contributes to both grain formation and mycotoxin tolerance. J Exp Bot (2015) 0.81
Splice form variant and amino acid changes in MDR49 confers DDT resistance in transgenic Drosophila. Sci Rep (2016) 0.81
Rhipicephalus (Boophilus) microplus aquaporin as an effective vaccine antigen to protect against cattle tick infestations. Parasit Vectors (2014) 0.81
New insights into the targeting of a subset of tail-anchored proteins to the outer mitochondrial membrane. Front Plant Sci (2014) 0.81
SpyA is a membrane-bound ADP-ribosyltransferase of Streptococcus pyogenes which modifies a streptococcal peptide, SpyB. Mol Microbiol (2012) 0.81
A genome-wide study of recombination rate variation in Bartonella henselae. BMC Evol Biol (2012) 0.81
The Aquaporin Channel Repertoire of the Tardigrade Milnesium tardigradum. Bioinform Biol Insights (2013) 0.80
The Peptidoglycan-Binding Protein SjcF1 Influences Septal Junction Function and Channel Formation in the Filamentous Cyanobacterium Anabaena. MBio (2015) 0.80
Coregulated genes link sulfide:quinone oxidoreductase and arsenic metabolism in Synechocystis sp. strain PCC6803. J Bacteriol (2014) 0.80
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SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology. Bioinformatics (2008) 3.20
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CAFASP3: the third critical assessment of fully automated structure prediction methods. Proteins (2003) 2.60
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Prediction of global and local model quality in CASP7 using Pcons and ProQ. Proteins (2007) 2.50
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Multi-domain proteins in the three kingdoms of life: orphan domains and other unassigned regions. J Mol Biol (2005) 1.95
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The interface of protein structure, protein biophysics, and molecular evolution. Protein Sci (2012) 1.54
Structure is three to ten times more conserved than sequence--a study of structural response in protein cores. Proteins (2009) 1.48
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Improved predictions by Pcons.net using multiple templates. Bioinformatics (2010) 0.77
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KalignP: improved multiple sequence alignments using position specific gap penalties in Kalign2. Bioinformatics (2011) 0.76
Enhanced Protein Production in Escherichia coli by Optimization of Cloning Scars at the Vector-Coding Sequence Junction. ACS Synth Biol (2015) 0.75
Determining receptor-ligand interaction of human galanin receptor type 3. Neurochem Int (2010) 0.75
Membrane protein shaving with thermolysin can be used to evaluate topology predictors. Proteomics (2013) 0.75
The salmon genome (and other issues in bioinformatics). Genome Biol (2002) 0.75
Localization prediction and structure-based in silico analysis of bacterial proteins: with emphasis on outer membrane proteins. Methods Mol Biol (2013) 0.75