Published in Nucleic Acids Res on December 02, 2011
A novel phage-encoded transcription antiterminator acts by suppressing bacterial RNA polymerase pausing. Nucleic Acids Res (2012) 0.90
Distinct functions of the RNA polymerase σ subunit region 3.2 in RNA priming and promoter escape. Nucleic Acids Res (2014) 0.89
Regulation of transcription elongation and termination. Biomolecules (2015) 0.89
E. coli 6S RNA release from RNA polymerase requires σ70 ejection by scrunching and is orchestrated by a conserved RNA hairpin. RNA (2012) 0.87
Mapping the Escherichia coli transcription elongation complex with exonuclease III. Methods Mol Biol (2015) 0.75
σ38-dependent promoter-proximal pausing by bacterial RNA polymerase. Nucleic Acids Res (2016) 0.75
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Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila. Science (2009) 4.13
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Pol II waiting in the starting gates: Regulating the transition from transcription initiation into productive elongation. Biochim Biophys Acta (2010) 2.86
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The regulatory roles and mechanism of transcriptional pausing. Biochem Soc Trans (2006) 2.52
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Transcription through the roadblocks: the role of RNA polymerase cooperation. EMBO J (2003) 1.89
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Co-overexpression of Escherichia coli RNA polymerase subunits allows isolation and analysis of mutant enzymes lacking lineage-specific sequence insertions. J Biol Chem (2003) 1.87
Role of the RNA polymerase trigger loop in catalysis and pausing. Nat Struct Mol Biol (2009) 1.86
The downstream DNA jaw of bacterial RNA polymerase facilitates both transcriptional initiation and pausing. J Biol Chem (2002) 1.79
The sigma 70 subunit of RNA polymerase mediates a promoter-proximal pause at the lac promoter. Nat Struct Mol Biol (2004) 1.77
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Complete structural model of Escherichia coli RNA polymerase from a hybrid approach. PLoS Biol (2010) 1.69
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Termination and antitermination: RNA polymerase runs a stop sign. Nat Rev Microbiol (2011) 1.59
The phage lambda gene Q transcription antiterminator binds DNA in the late gene promoter as it modifies RNA polymerase. Cell (1992) 1.57
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The sigma 70 subunit of RNA polymerase induces lacUV5 promoter-proximal pausing of transcription. Nat Struct Mol Biol (2004) 1.41
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The interaction between sigma70 and the beta-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation. Proc Natl Acad Sci U S A (2005) 1.38
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Prevalence of RNA polymerase stalling at Escherichia coli promoters after open complex formation. Mol Microbiol (2008) 1.30
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A surface of Escherichia coli sigma 70 required for promoter function and antitermination by phage lambda Q protein. Genes Dev (1998) 1.29
Region 3.2 of the sigma subunit contributes to the binding of the 3'-initiating nucleotide in the RNA polymerase active center and facilitates promoter clearance during initiation. J Biol Chem (2006) 1.27
Three-dimensional EM structure of an intact activator-dependent transcription initiation complex. Proc Natl Acad Sci U S A (2009) 1.26
Functional regions of the N-terminal domain of the antiterminator RfaH. Mol Microbiol (2010) 1.15
Region 1.2 of the RNA polymerase sigma subunit controls recognition of the -10 promoter element. EMBO J (2007) 1.12
Σ(70)-dependent transcription pausing in Escherichia coli. J Mol Biol (2011) 1.05
Initial transcribed region sequences influence the composition and functional properties of the bacterial elongation complex. Genes Dev (2011) 0.99
A backtrack-inducing sequence is an essential component of Escherichia coli σ(70)-dependent promoter-proximal pausing. Mol Microbiol (2010) 0.98
Multiple roles of the RNA polymerase {beta}' SW2 region in transcription initiation, promoter escape, and RNA elongation. Nucleic Acids Res (2010) 0.92
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Specification of a DNA replication origin by a transcription complex. Nat Cell Biol (2004) 2.16
A basal promoter element recognized by free RNA polymerase sigma subunit determines promoter recognition by RNA polymerase holoenzyme. Mol Cell (2006) 1.64
HoxB domain induction silences DNA replication origins in the locus and specifies a single origin at its boundary. EMBO Rep (2006) 1.28
Allosteric control of catalysis by the F loop of RNA polymerase. Proc Natl Acad Sci U S A (2009) 1.20
Region 1.2 of the RNA polymerase sigma subunit controls recognition of the -10 promoter element. EMBO J (2007) 1.12
Resistance to rifampicin: at the crossroads between ecological, genomic and medical concerns. Int J Antimicrob Agents (2010) 1.07
In Xenopus egg extracts, DNA replication initiates preferentially at or near asymmetric AT sequences. Mol Cell Biol (2008) 1.04
The transcription inhibitor lipiarmycin blocks DNA fitting into the RNA polymerase catalytic site. EMBO J (2010) 1.02
Multiple roles of the RNA polymerase {beta}' SW2 region in transcription initiation, promoter escape, and RNA elongation. Nucleic Acids Res (2010) 0.92
Frequency and characterisation of spontaneous lipiarmycin-resistant Enterococcus faecalis mutants selected in vitro. Int J Antimicrob Agents (2009) 0.90
A novel phage-encoded transcription antiterminator acts by suppressing bacterial RNA polymerase pausing. Nucleic Acids Res (2012) 0.90
Distinct functions of the RNA polymerase σ subunit region 3.2 in RNA priming and promoter escape. Nucleic Acids Res (2014) 0.89
Mycobacterium tuberculosis RbpA protein is a new type of transcriptional activator that stabilizes the σ A-containing RNA polymerase holoenzyme. Nucleic Acids Res (2012) 0.88
Interplay between the trigger loop and the F loop during RNA polymerase catalysis. Nucleic Acids Res (2013) 0.85
Modulation of RNA polymerase activity through the trigger loop folding. Transcription (2012) 0.84
Specific recognition of the -10 promoter element by the free RNA polymerase sigma subunit. J Biol Chem (2007) 0.83
Structural basis for promoter specificity switching of RNA polymerase by a phage factor. Genes Dev (2014) 0.82
Structural modules of RNA polymerase required for transcription from promoters containing downstream basal promoter element GGGA. J Biol Chem (2008) 0.82
Distinct functions of regions 1.1 and 1.2 of RNA polymerase σ subunits from Escherichia coli and Thermus aquaticus in transcription initiation. J Biol Chem (2012) 0.81
Myxopyronin: a punch in the jaws of bacterial RNA polymerase. Future Microbiol (2009) 0.79
An innovative biologic recycling process of leukoreduction filters to produce active human antimicrobial peptides. Transfusion (2013) 0.76
Single-strand promoter traps for bacterial RNA polymerase. Biochem J (2013) 0.75
Single-stranded DNA aptamers for functional probing of bacterial RNA polymerase. Methods Mol Biol (2015) 0.75