Published in BMC Vet Res on November 27, 2012
Characterisation of the faecal bacterial community in adult and elderly horses fed a high fibre, high oil or high starch diet using 454 pyrosequencing. PLoS One (2014) 0.96
Identification of a core bacterial community within the large intestine of the horse. PLoS One (2013) 0.94
The microbial community in the feces of the white rhinoceros (Ceratotherium simum) as determined by barcoded pyrosequencing analysis. PLoS One (2013) 0.89
Strong stability and host specific bacterial community in faeces of ponies. PLoS One (2013) 0.86
Changes in the equine fecal microbiota associated with the use of systemic antimicrobial drugs. BMC Vet Res (2015) 0.85
Analysis of the gut microbiota by high-throughput sequencing of the V5-V6 regions of the 16S rRNA gene in donkey. Curr Microbiol (2014) 0.82
Characterization of the first cultured representative of Verrucomicrobia subdivision 5 indicates the proposal of a novel phylum. ISME J (2016) 0.82
Toolbox Approaches Using Molecular Markers and 16S rRNA Gene Amplicon Data Sets for Identification of Fecal Pollution in Surface Water. Appl Environ Microbiol (2015) 0.81
Faecal microbiota of forage-fed horses in New Zealand and the population dynamics of microbial communities following dietary change. PLoS One (2014) 0.80
Molecular analysis of the microbiota in hard feces from healthy rabbits (Oryctolagus cuniculus) medicated with long term oral meloxicam. BMC Vet Res (2014) 0.80
High nutrient availability reduces the diversity and stability of the equine caecal microbiota. Microb Ecol Health Dis (2015) 0.79
The fecal microbiota of semi-free-ranging wood bison (Bison bison athabascae). BMC Vet Res (2014) 0.78
Endosymbiotic candidates for parasitoid defense in exotic and native New Zealand weevils. Microb Ecol (2015) 0.76
First insight into the faecal microbiota of the high Arctic muskoxen (Ovibos moschatus). Microb Genom (2016) 0.75
Characterization of the microbial communities along the gastrointestinal tract of sheep by 454 pyrosequencing analysis. Asian-Australas J Anim Sci (2016) 0.75
A Microbiological Map of the Healthy Equine Gastrointestinal Tract. PLoS One (2016) 0.75
Sorghum and wheat differentially affect caecal microbiota and associated performance characteristics of meat chickens. PeerJ (2017) 0.75
Comparison of Fecal Microbiota of Mongolian and Thoroughbred Horses by High-throughput Sequencing of the V4 Region of the 16S rRNA Gene. Asian-Australas J Anim Sci (2015) 0.75
Pyrosequencing analysis of roof-harvested rainwater and river water used for domestic purposes in Luthengele village in the Eastern Cape Province of South Africa. Environ Monit Assess (2015) 0.75
Functional Resilience and Response to a Dietary Additive (Kefir) in Models of Foregut and Hindgut Microbial Fermentation In Vitro. Front Microbiol (2017) 0.75
The Effects of Weaning Methods on Gut Microbiota Composition and Horse Physiology. Front Physiol (2017) 0.75
Core fecal microbiota of domesticated herbivorous ruminant, hindgut fermenters, and monogastric animals. Microbiologyopen (2017) 0.75
Basic local alignment search tool. J Mol Biol (1990) 659.07
QIIME allows analysis of high-throughput community sequencing data. Nat Methods (2010) 85.34
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol (2007) 60.97
A core gut microbiome in obese and lean twins. Nature (2008) 52.30
Evolution of mammals and their gut microbes. Science (2008) 21.40
PyNAST: a flexible tool for aligning sequences to a template alignment. Bioinformatics (2009) 15.93
FastTree: computing large minimum evolution trees with profiles instead of a distance matrix. Mol Biol Evol (2009) 15.15
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea. ISME J (2011) 13.64
Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities. Appl Environ Microbiol (2007) 11.88
Review and re-analysis of domain-specific 16S primers. J Microbiol Methods (2003) 9.49
Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans. Science (2011) 8.88
The gut flora as a forgotten organ. EMBO Rep (2006) 7.42
UniFrac: an effective distance metric for microbial community comparison. ISME J (2010) 6.43
Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP). BMC Microbiol (2008) 6.28
Microbes in gastrointestinal health and disease. Gastroenterology (2008) 4.65
Application of 'next-generation' sequencing technologies to microbial genetics. Nat Rev Microbiol (2009) 3.30
Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: bacterial diversity in the ileum of newly weaned Salmonella-infected pigs. Foodborne Pathog Dis (2008) 2.77
Relationship between condition score, physical measurements and body fat percentage in mares. Equine Vet J (1983) 2.73
DECIPHER, a search-based approach to chimera identification for 16S rRNA sequences. Appl Environ Microbiol (2011) 2.63
Estimating the number of species in a stochastic abundance model. Biometrics (2002) 2.62
Black Box Chimera Check (B2C2): a Windows-Based Software for Batch Depletion of Chimeras from Bacterial 16S rRNA Gene Datasets. Open Microbiol J (2010) 1.94
The intestinal microbiota and chronic disorders of the gut. Nat Rev Gastroenterol Hepatol (2011) 1.86
Community structures of fecal bacteria in cattle from different animal feeding operations. Appl Environ Microbiol (2011) 1.66
Strain characterization and classification of oxyphotobacteria in clone cultures on the basis of 16S rRNA sequences from the variable regions V6, V7, and V8. Appl Environ Microbiol (1997) 1.64
Lactobacillus hayakitensis, L. equigenerosi and L. equi, predominant lactobacilli in the intestinal flora of healthy thoroughbreds. Anim Sci J (2009) 1.32
Comparison of the fecal microbiota of healthy horses and horses with colitis by high throughput sequencing of the V3-V5 region of the 16S rRNA gene. PLoS One (2012) 1.31
Enumeration of anaerobic bacterial microflora of the equine gastrointestinal tract. Appl Environ Microbiol (1988) 1.16
Characterization of the fecal bacteria communities of forage-fed horses by pyrosequencing of 16S rRNA V4 gene amplicons. FEMS Microbiol Lett (2011) 1.13
Changes in faecal bacteria associated with concentrate and forage-only diets fed to horses in training. Equine Vet J (2009) 1.13
Clostridium difficile Infection and Inflammatory Bowel Disease: A Review. Gastroenterol Res Pract (2011) 1.11
Intestinal microflora and metabolic diseases. Diabetes Metab (2009) 1.08
Current concepts of the intestinal microbiota and the pathogenesis of infection. Curr Infect Dis Rep (2011) 1.05
Molecular analysis of the bacterial microbiota in duodenal biopsies from dogs with idiopathic inflammatory bowel disease. Vet Microbiol (2009) 1.05
A comparison of the microbiome and the metabolome of different regions of the equine hindgut. FEMS Microbiol Ecol (2012) 1.01
Identification of Ruminococcus flavefaciens as the predominant cellulolytic bacterial species of the equine cecum. Appl Environ Microbiol (1999) 0.99
Application of molecular fingerprinting for qualitative assessment of small-intestinal bacterial diversity in dogs. J Clin Microbiol (2004) 0.96
Fluorescence in situ hybridization analysis of hindgut bacteria associated with the development of equine laminitis. Environ Microbiol (2007) 0.95
Equine stomachs harbor an abundant and diverse mucosal microbiota. Appl Environ Microbiol (2012) 0.94
Microbial ecology of the equine hindgut during oligofructose-induced laminitis. ISME J (2008) 0.93
Equine laminitis of alimentary origin: an experimental model. Am J Vet Res (1975) 0.93
Clostridial diseases of small ruminants. Vet Res (1998) 0.92
The equine intestinal microbiome. Anim Health Res Rev (2012) 0.90
Changes in equine hindgut bacterial populations during oligofructose-induced laminitis. Environ Microbiol (2006) 0.89
The genetic diversity of lactic acid producing bacteria in the equine gastrointestinal tract. FEMS Microbiol Lett (2005) 0.88
Effects of an abrupt diet change from hay to concentrate on microbial numbers and physical environment in the cecum of the pony. Appl Environ Microbiol (1988) 0.87
A comparative study of the intestinal microbiota of healthy horses and those suffering from equine grass sickness. Vet Microbiol (2002) 0.87
Fecal microbiota of horses in the clinical setting: potential effects of penicillin and general anesthesia. Vet Microbiol (2010) 0.85
Isolation and characterization of rice-straw degrading clostridia from cattle rumen. J Vet Med Sci (1992) 0.85
Nutrition of the horse. Annu Rev Nutr (1994) 0.84
Digestion coefficients, blood glucose levels and molar percentage of volatile acids in intestinal fluid of ponies fed varying forage-grain ratios. J Anim Sci (1971) 0.83
Clostridium difficile infection and liver disease. J Gastrointestin Liver Dis (2010) 0.83
Changes in the caecal flora associated with the onset of laminitis. Equine Vet J (1978) 0.83
Endotoxaemia: a review with implications for the horse. Equine Vet J (2005) 0.82
Microbial events in the hindgut during carbohydrate-induced equine laminitis. Vet Clin North Am Equine Pract (2010) 0.81
Pasture-associated laminitis. Vet Clin North Am Equine Pract (2009) 0.81
Current concepts on the pathophysiology of pasture-associated laminitis. Vet Clin North Am Equine Pract (2010) 0.79
Molecular insights into dietary induced colic in the horse. Equine Vet J (2008) 0.79
Understanding the equine cecum-colon ecosystem: current knowledge and future perspectives. Animal (2011) 0.78
The role of nutrition in colic. Vet Clin North Am Equine Pract (2009) 0.78
Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification. Science (2011) 8.23
Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps. Science (2005) 5.47
The role of biofilms: are we hitting the right target? Plast Reconstr Surg (2011) 1.74
Macroevolutionary dynamics and historical biogeography of primate diversification inferred from a species supermatrix. PLoS One (2012) 1.52
Evolutionary movement of centromeres in horse, donkey, and zebra. Genomics (2006) 1.34
Novel gene acquisition on carnivore Y chromosomes. PLoS Genet (2006) 1.23
Sensitivity of serum markers for pancreatitis in dogs with macroscopic evidence of pancreatitis. Vet Ther (2008) 1.19
A high-resolution cat radiation hybrid and integrated FISH mapping resource for phylogenomic studies across Felidae. Genomics (2008) 1.13
The potential use of bacterial community succession in forensics as described by high throughput metagenomic sequencing. Int J Legal Med (2013) 1.07
Natural killer cell receptors in the horse: evidence for the existence of multiple transcribed LY49 genes. Eur J Immunol (2004) 1.05
Gene discovery and comparative analysis of X-degenerate genes from the domestic cat Y chromosome. Genomics (2008) 1.04
Endophyte microbiome diversity in micropropagated Atriplex canescens and Atriplex torreyi var griffithsii. PLoS One (2011) 1.03
A human-horse comparative map based on equine BAC end sequences. Genomics (2006) 1.02
Exceptional conservation of horse-human gene order on X chromosome revealed by high-resolution radiation hybrid mapping. Proc Natl Acad Sci U S A (2004) 1.00
Conservation of gene order between horse and human X chromosomes as evidenced through radiation hybrid mapping. Genomics (2002) 0.94
A detailed physical map of the horse Y chromosome. Proc Natl Acad Sci U S A (2004) 0.94
A gene catalogue of the euchromatic male-specific region of the horse Y chromosome: comparison with human and other mammals. PLoS One (2011) 0.91
Stallion sperm transcriptome comprises functionally coherent coding and regulatory RNAs as revealed by microarray analysis and RNA-seq. PLoS One (2013) 0.91
FISH for mapping single copy genes. Methods Mol Biol (2008) 0.89
A high-resolution physical map of equine homologs of HSA19 shows divergent evolution compared with other mammals. Mamm Genome (2005) 0.88
Xylooligosaccharide increases bifidobacteria but not lactobacilli in human gut microbiota. Food Funct (2014) 0.86
Remarkable synteny conservation of melanocortin receptors in chicken, human, and other vertebrates. Genomics (2003) 0.85
Total RNA isolation from stallion sperm and testis biopsies. Theriogenology (2010) 0.85
No bull: upholding community standards in public sharing of biological datasets. Proc Natl Acad Sci U S A (2013) 0.85
Origin of the prolactin-releasing hormone (PRLH) receptors: evidence of coevolution between PRLH and a redundant neuropeptide Y receptor during vertebrate evolution. Genomics (2005) 0.84
Classification of diet-modulated gene signatures at the colon cancer initiation and progression stages. Dig Dis Sci (2011) 0.84
Characterization of the equine glycogen debranching enzyme gene (AGL): Genomic and cDNA structure, localization, polymorphism and expression. Gene (2007) 0.83
Interstitial telomeric sites and NORs in Hartmann's zebra (Equus zebra hartmannae) chromosomes. Chromosome Res (2002) 0.83
High-resolution gene maps of horse chromosomes 14 and 21: additional insights into evolution and rearrangements of HSA5 homologs in mammals. Genomics (2006) 0.82
Comparative mapping in the pig: localization of 214 expressed sequence tags. Mamm Genome (2003) 0.81
Plasma proteomics shows an elevation of the anti-inflammatory protein APOA-IV in chronic equine laminitis. BMC Vet Res (2012) 0.81
Necrotizing enterocolitis and cytomegalovirus infection in a premature infant. Pediatrics (2012) 0.80
Sequence analysis of a 212 kb defensin gene cluster on ECA 27q17. Gene (2006) 0.80
A survey of bacterial diversity from successive life stages of black soldier fly (Diptera: Stratiomyidae) by using 16S rDNA pyrosequencing. J Med Entomol (2013) 0.79
A 1.4-Mb interval RH map of horse chromosome 17 provides detailed comparison with human and mouse homologues. Genomics (2004) 0.79
A pilot study evaluating changes in pancreatic lipase immunoreactivity concentrations in canines treated with L-asparaginase (ASNase), vincristine, or both for lymphoma. Can J Vet Res (2009) 0.79
The fungal microbiome in chronic rhinosinusitis: richness, diversity, postoperative changes and patient outcomes. Int Forum Allergy Rhinol (2014) 0.79
Genome-wide association study implicates testis-sperm specific FKBP6 as a susceptibility locus for impaired acrosome reaction in stallions. PLoS Genet (2012) 0.79
Combined treatment of Pseudomonas aeruginosa biofilm with lactoferrin and xylitol inhibits the ability of bacteria to respond to damage resulting from lactoferrin iron chelation. Int J Antimicrob Agents (2011) 0.78
Age-related changes following in vitro stimulation with Rhodococcus equi of peripheral blood leukocytes from neonatal foals. PLoS One (2013) 0.78
The Eutherian Pseudoautosomal Region. Cytogenet Genome Res (2016) 0.77
Bacteria mediate oviposition by the black soldier fly, Hermetia illucens (L.), (Diptera: Stratiomyidae). Sci Rep (2013) 0.77
High-resolution RH map of horse chromosome 22 reveals a putative ancestral vertebrate chromosome. Genomics (2005) 0.77
Pyrosequencing reveals bacteria carried in different wind-eroded sediments. J Environ Qual (2012) 0.76
Cellular and humoral immunity in chronic equine laminitis. Vet Immunol Immunopathol (2013) 0.76
Impact of short-term acidification on nitrification and nitrifying bacterial community dynamics in soilless cultivation media. Appl Environ Microbiol (2012) 0.75
Polymorphism identification, RH mapping, and association analysis with the anxiety trait of the equine serotonin transporter (SLC6A4) gene. J Vet Med Sci (2006) 0.75
UP1 extends life of primary porcine fetal fibroblasts in culture. Cloning Stem Cells (2003) 0.75