Published in Biosci Rep on August 30, 2013
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HOTAIR is a negative prognostic factor and exhibits pro-oncogenic activity in pancreatic cancer. Oncogene (2012) 4.30
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Xist RNA is a potent suppressor of hematologic cancer in mice. Cell (2013) 2.93
Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer. Nat Struct Mol Biol (2013) 2.84
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GATA-4 and GATA-5 transcription factor genes and potential downstream antitumor target genes are epigenetically silenced in colorectal and gastric cancer. Mol Cell Biol (2003) 2.42
Cancer as a dysregulated epigenome allowing cellular growth advantage at the expense of the host. Nat Rev Cancer (2013) 2.41
A truncating mutation of HDAC2 in human cancers confers resistance to histone deacetylase inhibition. Nat Genet (2006) 2.33
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An evaluation of new criteria for CpG islands in the human genome as gene markers. Bioinformatics (2004) 2.19
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Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers. Genome Biol (2012) 2.12
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Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer. Oncogene (2004) 2.02
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Targeting long non-coding RNA to therapeutically upregulate gene expression. Nat Rev Drug Discov (2013) 1.82
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Long antisense non-coding RNAs function to direct epigenetic complexes that regulate transcription in human cells. Epigenetics (2009) 1.71
Epigenetic regulation of the INK4b-ARF-INK4a locus: in sickness and in health. Epigenetics (2010) 1.63
Androgen-responsive long noncoding RNA CTBP1-AS promotes prostate cancer. EMBO J (2013) 1.48
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Prostate cancer: diagnostic performance of the PCA3 urine test. Nat Rev Urol (2011) 1.43
Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer. Mol Cancer (2011) 1.42
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Relationship between CAD risk genotype in the chromosome 9p21 locus and gene expression. Identification of eight new ANRIL splice variants. PLoS One (2009) 1.37
Overexpression of long noncoding RNA PCAT-1 is a novel biomarker of poor prognosis in patients with colorectal cancer. Med Oncol (2013) 1.35
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Long non-coding RNAs: versatile master regulators of gene expression and crucial players in cancer. Am J Transl Res (2012) 1.33
BRCA1 is a negative modulator of the PRC2 complex. EMBO J (2013) 1.31
A SWI/SNF chromatin-remodeling complex acts in noncoding RNA-mediated transcriptional silencing. Mol Cell (2012) 1.29
Intronic RNAs constitute the major fraction of the non-coding RNA in mammalian cells. BMC Genomics (2012) 1.26
Chromatin remodeling factor CHD5 is silenced by promoter CpG island hypermethylation in human cancer. Epigenetics (2008) 1.23
Uterine leiomyomata with t(10;17) disrupt the histone acetyltransferase MORF. Cancer Res (2004) 1.21
Histone variants: emerging players in cancer biology. Cell Mol Life Sci (2013) 1.17
The intronic long noncoding RNA ANRASSF1 recruits PRC2 to the RASSF1A promoter, reducing the expression of RASSF1A and increasing cell proliferation. PLoS Genet (2013) 1.14
LSD1 inhibition: a therapeutic strategy in cancer? Expert Opin Ther Targets (2012) 1.14
Long noncoding RNA-mediated maintenance of DNA methylation and transcriptional gene silencing. Development (2012) 1.11
Androgen responsive intronic non-coding RNAs. BMC Biol (2007) 1.07
AS1DHRS4, a head-to-head natural antisense transcript, silences the DHRS4 gene cluster in cis and trans. Proc Natl Acad Sci U S A (2012) 0.99
Guided by RNAs: X-inactivation as a model for lncRNA function. J Mol Biol (2013) 0.96
Genome sequence of Aedes aegypti, a major arbovirus vector. Science (2007) 9.19
Genome mapping and expression analyses of human intronic noncoding RNAs reveal tissue-specific patterns and enrichment in genes related to regulation of transcription. Genome Biol (2007) 2.03
Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer. Oncogene (2004) 2.02
Long intronic noncoding RNA transcription: expression noise or expression choice? Genomics (2008) 1.93
The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags. Proc Natl Acad Sci U S A (2003) 1.79
Systems medicine and integrated care to combat chronic noncommunicable diseases. Genome Med (2011) 1.78
The tegument surface membranes of the human blood parasite Schistosoma mansoni: a proteomic analysis after differential extraction. Proteomics (2006) 1.63
Schistosoma mansoni tegument protein Sm29 is able to induce a Th1-type of immune response and protection against parasite infection. PLoS Negl Trop Dis (2008) 1.58
Large-scale transcriptome analyses reveal new genetic marker candidates of head, neck, and thyroid cancer. Cancer Res (2005) 1.47
Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer. Mol Cancer (2011) 1.42
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ESTWeb: bioinformatics services for EST sequencing projects. Bioinformatics (2003) 1.37
DNA microarray-based genome comparison of a pathogenic and a nonpathogenic strain of Xylella fastidiosa delineates genes important for bacterial virulence. J Bacteriol (2004) 1.29
Schistosoma mansoni TGF-beta receptor II: role in host ligand-induced regulation of a schistosome target gene. PLoS Pathog (2006) 1.29
Protein variation in blood-dwelling schistosome worms generated by differential splicing of micro-exon gene transcripts. Genome Res (2010) 1.22
Gene expression profiling reveals molecular marker candidates of laryngeal squamous cell carcinoma. Oncol Rep (2009) 1.17
Whole-genome analysis of transporters in the plant pathogen Xylella fastidiosa. Microbiol Mol Biol Rev (2002) 1.15
The intronic long noncoding RNA ANRASSF1 recruits PRC2 to the RASSF1A promoter, reducing the expression of RASSF1A and increasing cell proliferation. PLoS Genet (2013) 1.14
Conserved tissue expression signatures of intronic noncoding RNAs transcribed from human and mouse loci. Genomics (2008) 1.12
Saci-1, -2, and -3 and Perere, four novel retrotransposons with high transcriptional activities from the human parasite Schistosoma mansoni. J Virol (2004) 1.09
Androgen responsive intronic non-coding RNAs. BMC Biol (2007) 1.07
Schistosomes--proteomics studies for potential novel vaccines and drug targets. Drug Discov Today (2009) 1.07
Identification of 18 new transcribed retrotransposons in Schistosoma mansoni. Biochem Biophys Res Commun (2005) 1.06
Interference with hemozoin formation represents an important mechanism of schistosomicidal action of antimalarial quinoline methanols. PLoS Negl Trop Dis (2009) 1.06
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers. Proc Natl Acad Sci U S A (2009) 1.04
Schistosomiasis--a century searching for chemotherapeutic drugs. Parasitol Res (2006) 1.03
Identification of protein-coding and intronic noncoding RNAs down-regulated in clear cell renal carcinoma. Mol Carcinog (2008) 1.02
Evaluation of reference-based two-color methods for measurement of gene expression ratios using spotted cDNA microarrays. BMC Genomics (2006) 1.01
Gene expression arrays in cancer research: methods and applications. Crit Rev Oncol Hematol (2005) 1.01
Mapping transposon insertion sites by touchdown PCR and hybrid degenerate primers. Biotechniques (2005) 1.00
SmTRC1, a novel Schistosoma mansoni DNA transposon, discloses new families of animal and fungi transposons belonging to the CACTA superfamily. BMC Evol Biol (2006) 1.00
Metagenomic analysis of a tropical composting operation at the são paulo zoo park reveals diversity of biomass degradation functions and organisms. PLoS One (2013) 0.99
Zerg: a very fast BLAST parser library. Bioinformatics (2003) 0.97
A quantitative view of the transcriptome of Schistosoma mansoni adult-worms using SAGE. BMC Genomics (2007) 0.97
Gene expression profile of mesenchymal stem cells from paired umbilical cord units: cord is different from blood. Stem Cell Rev (2009) 0.96
Apert p.Ser252Trp mutation in FGFR2 alters osteogenic potential and gene expression of cranial periosteal cells. Mol Med (2007) 0.95
Gender biased differential alternative splicing patterns of the transcriptional cofactor CA150 gene in Schistosoma mansoni. Mol Biochem Parasitol (2006) 0.93
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Screening the Schistosoma mansoni transcriptome for genes differentially expressed in the schistosomulum stage in search for vaccine candidates. Parasitol Res (2010) 0.89
Influence of Ecto-nucleoside triphosphate diphosphohydrolase activity on Trypanosoma cruzi infectivity and virulence. PLoS Negl Trop Dis (2009) 0.89
Transcriptome analyses of inhibitor-treated schistosome females provide evidence for cooperating Src-kinase and TGFβ receptor pathways controlling mitosis and eggshell formation. PLoS Pathog (2013) 0.89
Characterization and immunolocalization of an NTP diphosphohydrolase of Trypanosoma cruzi. Biochem Biophys Res Commun (2004) 0.88
Effects of curcumin on the parasite Schistosoma mansoni: a transcriptomic approach. Mol Biochem Parasitol (2012) 0.87
Exploring the Schistosoma mansoni adult male transcriptome using RNA-seq. Exp Parasitol (2011) 0.87
Molecular characterization and immunolocalization of Schistosoma mansoni ATP-diphosphohydrolase. Biochem Biophys Res Commun (2003) 0.87
Analysis of Schistosoma mansoni genes shared with Deuterostomia and with possible roles in host interactions. BMC Genomics (2007) 0.87
Human malaria parasites display a receptor for activated C kinase ortholog. Biochem Biophys Res Commun (2003) 0.86
Identification of the Schistosoma mansoni TNF-alpha receptor gene and the effect of human TNF-alpha on the parasite gene expression profile. PLoS Negl Trop Dis (2009) 0.84
Non-coding RNAs in schistosomes: an unexplored world. An Acad Bras Cienc (2011) 0.84
Effect of human TGF-β on the gene expression profile of Schistosoma mansoni adult worms. Mol Biochem Parasitol (2012) 0.84
Combinatory microarray and SuperSAGE analyses identify pairing-dependently transcribed genes in Schistosoma mansoni males, including follistatin. PLoS Negl Trop Dis (2013) 0.84
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Splice variants of TLE family genes and up-regulation of a TLE3 isoform in prostate tumors. Biochem Biophys Res Commun (2007) 0.84
ARHGAP21 is a RhoGAP for RhoA and RhoC with a role in proliferation and migration of prostate adenocarcinoma cells. Biochim Biophys Acta (2012) 0.83
RASL11A, member of a novel small monomeric GTPase gene family, is down-regulated in prostate tumors. Biochem Biophys Res Commun (2004) 0.83
Schistosoma mansoni histones: from transcription to chromatin regulation; an in silico analysis. Mol Biochem Parasitol (2012) 0.82
Identification of protein-coding and non-coding RNA expression profiles in CD34+ and in stromal cells in refractory anemia with ringed sideroblasts. BMC Med Genomics (2010) 0.82
Characterization of Schistosoma mansoni ATPDase2 gene, a novel apyrase family member. Biochem Biophys Res Commun (2006) 0.82
Protein-coding genes and long noncoding RNAs are differentially expressed in dasatinib-treated chronic myeloid leukemia patients with resistance to imatinib. Hematology (2013) 0.80
Global analysis of biogenesis, stability and sub-cellular localization of lncRNAs mapping to intragenic regions of the human genome. RNA Biol (2015) 0.79
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Loss of caspase 7 expression is associated with poor prognosis in renal cell carcinoma clear cell subtype. Urology (2013) 0.79
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The Brazilian contribution to the study of the Schistosoma mansoni transcriptome. Acta Trop (2008) 0.78
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Curupira-1 and Curupira-2, two novel Mutator-like DNA transposons from the genomes of human parasites Schistosoma mansoni and Schistosoma japonicum. Parasitology (2011) 0.75