Published in Nucleic Acids Res on December 01, 2013
Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi. Proc Natl Acad Sci U S A (2014) 1.70
The Pathogen-Host Interactions database (PHI-base): additions and future developments. Nucleic Acids Res (2014) 1.53
Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control. PLoS Genet (2016) 1.42
Fungal traits that drive ecosystem dynamics on land. Microbiol Mol Biol Rev (2015) 1.02
Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species. BMC Genomics (2014) 1.00
Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing. PLoS One (2015) 0.99
Secretome analysis reveals effector candidates associated with broad host range necrotrophy in the fungal plant pathogen Sclerotinia sclerotiorum. BMC Genomics (2014) 0.99
One fungus, which genes? Development and assessment of universal primers for potential secondary fungal DNA barcodes. Persoonia (2015) 0.98
The diversity of fungal genome. Biol Proced Online (2015) 0.94
Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii. Fungal Genet Biol (2015) 0.94
A parts list for fungal cellulosomes revealed by comparative genomics. Nat Microbiol (2017) 0.92
Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements. Nucleic Acids Res (2016) 0.92
Comparative genomics of biotechnologically important yeasts. Proc Natl Acad Sci U S A (2016) 0.88
Diversity and variability of NOD-like receptors in fungi. Genome Biol Evol (2014) 0.87
Metagenomics and Bioinformatics in Microbial Ecology: Current Status and Beyond. Microbes Environ (2016) 0.85
Molecular diversity of LysM carbohydrate-binding motifs in fungi. Curr Genet (2015) 0.83
Comparative Analysis of Secretomes from Ectomycorrhizal Fungi with an Emphasis on Small-Secreted Proteins. Front Microbiol (2015) 0.83
Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus. Biotechnol Biofuels (2015) 0.83
Transposable Elements versus the Fungal Genome: Impact on Whole-Genome Architecture and Transcriptional Profiles. PLoS Genet (2016) 0.83
Duplications and losses in gene families of rust pathogens highlight putative effectors. Front Plant Sci (2014) 0.82
Unearthing the roots of ectomycorrhizal symbioses. Nat Rev Microbiol (2016) 0.81
PCR primers to study the diversity of expressed fungal genes encoding lignocellulolytic enzymes in soils using high-throughput sequencing. PLoS One (2014) 0.80
A dipeptide transporter from the arbuscular mycorrhizal fungus Rhizophagus irregularis is upregulated in the intraradical phase. Front Plant Sci (2014) 0.80
Phosphorylation of spore coat proteins by a family of atypical protein kinases. Proc Natl Acad Sci U S A (2016) 0.80
IMA Genome-F 6: Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723. IMA Fungus (2016) 0.80
Biocatalytic portfolio of Basidiomycota. Curr Opin Chem Biol (2016) 0.79
Full Genome of Phialocephala scopiformis DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin. Genome Announc (2016) 0.78
A naturally occurring, noncanonical GTP aptamer made of simple tandem repeats. RNA Biol (2014) 0.78
Pathogen-regulated genes in wheat isogenic lines differing in resistance to brown rust Puccinia triticina. BMC Genomics (2015) 0.78
Dimensions of Horizontal Gene Transfer in Eukaryotic Microbial Pathogens. PLoS Pathog (2015) 0.78
Comprehensive curation and analysis of fungal biosynthetic gene clusters of published natural products. Fungal Genet Biol (2016) 0.78
Solution hybrid selection capture for the recovery of functional full-length eukaryotic cDNAs from complex environmental samples. DNA Res (2014) 0.78
Clinical and biological insights from viral genome sequencing. Nat Rev Microbiol (2017) 0.78
ToxGen: an improved reference database for the identification of type B-trichothecene genotypes in Fusarium. PeerJ (2017) 0.78
Cloning, expression and characterization of a novel cold-active and organic solvent-tolerant esterase from Monascus ruber M7. Extremophiles (2016) 0.77
Widespread adenine N6-methylation of active genes in fungi. Nat Genet (2017) 0.77
Candida albicans Agglutinin-Like Sequence (Als) Family Vignettes: A Review of Als Protein Structure and Function. Front Microbiol (2016) 0.77
Genome sequence of the plant growth promoting endophytic yeast Rhodotorula graminis WP1. Front Microbiol (2015) 0.77
Assessment and refinement of eukaryotic gene structure prediction with gene-structure-aware multiple protein sequence alignment. BMC Bioinformatics (2014) 0.77
Visual Comparative Omics of Fungi for Plant Biomass Deconstruction. Front Microbiol (2016) 0.77
Recombinant protein production facility for fungal biomass-degrading enzymes using the yeast Pichia pastoris. Front Microbiol (2015) 0.77
Identification of Allorecognition Loci in Neurospora crassa by Genomics and Evolutionary Approaches. Mol Biol Evol (2015) 0.77
Diversity and evolution of cytochrome P450 monooxygenases in Oomycetes. Sci Rep (2015) 0.77
Transcriptome and Secretome Analyses of the Wood Decay Fungus Wolfiporia cocos Support Alternative Mechanisms of Lignocellulose Conversion. Appl Environ Microbiol (2016) 0.77
Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum. Nat Commun (2016) 0.77
Horizontally acquired genes in early-diverging pathogenic fungi enable the use of host nucleosides and nucleotides. Proc Natl Acad Sci U S A (2016) 0.77
LAMP Detection Assays for Boxwood Blight Pathogens: A Comparative Genomics Approach. Sci Rep (2016) 0.77
Revisiting phylogenetic diversity and cryptic species of Cenococcum geophilum sensu lato. Mycorrhiza (2016) 0.76
Maltase protein of Ogataea (Hansenula) polymorpha is a counterpart to the resurrected ancestor protein ancMALS of yeast maltases and isomaltases. Yeast (2016) 0.76
Molecular evolutionary dynamics of cytochrome P450 monooxygenases across kingdoms: Special focus on mycobacterial P450s. Sci Rep (2016) 0.76
Novel Introner-Like Elements in fungi Are Involved in Parallel Gains of Spliceosomal Introns. PLoS One (2015) 0.76
Bioinformatics Prediction of Polyketide Synthase Gene Clusters from Mycosphaerella fijiensis. PLoS One (2016) 0.76
Genome-Wide Annotation and Comparative Analysis of Cytochrome P450 Monooxygenases in Basidiomycete Biotrophic Plant Pathogens. PLoS One (2015) 0.76
Polyglycine hydrolases: Fungal β-lactamase-like endoproteases that cleave polyglycine regions within plant class IV chitinases. Protein Sci (2015) 0.76
Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica. Genome Announc (2016) 0.76
Lignocellulose-converting enzyme activity profiles correlate with molecular systematics and phylogeny grouping in the incoherent genus Phlebia (Polyporales, Basidiomycota). BMC Microbiol (2015) 0.76
Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951. Genome Announc (2014) 0.76
HGT-Finder: A New Tool for Horizontal Gene Transfer Finding and Application to Aspergillus genomes. Toxins (Basel) (2015) 0.76
Phytochelatin synthase is required for tolerating metal toxicity in a basidiomycete yeast and is a conserved factor involved in metal homeostasis in fungi. Fungal Biol Biotechnol (2015) 0.76
Resolved phylogeny and biogeography of the root pathogen Armillaria and its gasteroid relative, Guyanagaster. BMC Evol Biol (2017) 0.75
Genome-Wide Identification of Mitogen-Activated Protein Kinase Gene Family across Fungal Lineage Shows Presence of Novel and Diverse Activation Loop Motifs. PLoS One (2016) 0.75
Genomic Data Quality Impacts Automated Detection of Lateral Gene Transfer in Fungi. G3 (Bethesda) (2017) 0.75
Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions. G3 (Bethesda) (2015) 0.75
Online Databases for Taxonomy and Identification of Pathogenic Fungi and Proposal for a Cloud-Based Dynamic Data Network Platform. J Clin Microbiol (2017) 0.75
Comparative analysis of the predicted secretomes of Rosaceae scab pathogens Venturia inaequalis and V. pirina reveals expanded effector families and putative determinants of host range. BMC Genomics (2017) 0.75
Distinct Growth and Secretome Strategies for Two Taxonomically Divergent Brown Rot Fungi. Appl Environ Microbiol (2017) 0.75
Characterization of Cercospora nicotianae Hypothetical Proteins in Cercosporin Resistance. PLoS One (2015) 0.75
Degradation of Bunker C Fuel Oil by White-Rot Fungi in Sawdust Cultures Suggests Potential Applications in Bioremediation. PLoS One (2015) 0.75
All that glitters is not Ramularia. Stud Mycol (2016) 0.75
Draft Genome Sequence of Coniochaeta ligniaria NRRL 30616, a Lignocellulolytic Fungus for Bioabatement of Inhibitors in Plant Biomass Hydrolysates. Genome Announc (2017) 0.75
The Identification of Phytohormone Receptor Homologs in Early Diverging Fungi Suggests a Role for Plant Sensing in Land Colonization by Fungi. MBio (2017) 0.75
Secondary metabolite gene clusters in the entomopathogen fungus Metarhizium anisopliae: genome identification and patterns of expression in a cuticle infection model. BMC Genomics (2016) 0.75
Genome Sequence of the Basidiomycete White-Rot Fungus Trametes pubescens FBCC735. Genome Announc (2017) 0.75
Transcription Factors in Fungi: TFome Dynamics, Three Major Families, and Dual-Specificity TFs. Front Genet (2017) 0.75
A Novel Type Pathway-Specific Regulator and Dynamic Genome Environments of a Solanapyrone Biosynthesis Gene Cluster in the Fungus Ascochyta rabiei. Eukaryot Cell (2015) 0.75
Draft Genome Sequence of Microdochium bolleyi, a Dark Septate Fungal Endophyte of Beach Grass. Genome Announc (2016) 0.75
Scaling up discovery of hidden diversity in fungi: impacts of barcoding approaches. Philos Trans R Soc Lond B Biol Sci (2016) 0.75
Basidioascus undulatus: genome, origins, and sexuality. IMA Fungus (2015) 0.75
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. Genome Biol (2017) 0.75
Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi. PLoS One (2016) 0.75
Four Inducible Promoters for Controlled Gene Expression in the Oleaginous Yeast Rhodotorula toruloides. Front Microbiol (2016) 0.75
Metadata Analysis of Phanerochaete chrysosporium Gene Expression Data Identified Common CAZymes Encoding Gene Expression Profiles Involved in Cellulose and Hemicellulose Degradation. Int J Biol Sci (2017) 0.75
Comparative Transcriptomic Analysis of Virulence Factors in Leptosphaeria maculans during Compatible and Incompatible Interactions with Canola. Front Plant Sci (2016) 0.75
Crystal Structure of Saccharomyces cerevisiae ECM4, a Xi-Class Glutathione Transferase that Reacts with Glutathionyl-(hydro)quinones. PLoS One (2016) 0.75
Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2. Genome Announc (2016) 0.75
Fungi Contribute Critical but Spatially Varying Roles in Nitrogen and Carbon Cycling in Acid Mine Drainage. Front Microbiol (2016) 0.75
A silver bullet in a golden age of functional genomics: the impact of Agrobacterium-mediated transformation of fungi. Fungal Biol Biotechnol (2017) 0.75
Cytochrome P450 diversity in the tree of life. Biochim Biophys Acta (2017) 0.75
PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities. Front Microbiol (2017) 0.75
Emergence of plant and rhizospheric microbiota as stable interactomes. Protoplasma (2016) 0.75
A Comparison of Microsatellites in Phytopathogenic Aspergillus Species in Order to Develop Markers for the Assessment of Genetic Diversity among Its Isolates. Front Microbiol (2017) 0.75
A genome Tree of Life for the Fungi kingdom. Proc Natl Acad Sci U S A (2017) 0.75
Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12. Genom Data (2017) 0.75
Gene expression metadata analysis reveals molecular mechanisms employed by Phanerochaete chrysosporium during lignin degradation and detoxification of plant extractives. Curr Genet (2017) 0.75
Comparative analysis of genome sequences of the conifer tree pathogen, Heterobasidion annosum s.s. Genom Data (2017) 0.75
Uniclust databases of clustered and deeply annotated protein sequences and alignments. Nucleic Acids Res (2016) 0.75
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol (2001) 66.87
SignalP 4.0: discriminating signal peptides from transmembrane regions. Nat Methods (2011) 33.90
The Pfam protein families database. Nucleic Acids Res (2011) 33.46
KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids Res (2011) 30.20
An efficient algorithm for large-scale detection of protein families. Nucleic Acids Res (2002) 25.81
InterPro: the integrative protein signature database. Nucleic Acids Res (2008) 25.07
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res (2005) 19.81
Ab initio gene finding in Drosophila genomic DNA. Genome Res (2000) 19.23
GeneWise and Genomewise. Genome Res (2004) 17.87
VISTA: computational tools for comparative genomics. Nucleic Acids Res (2004) 13.52
Update on activities at the Universal Protein Resource (UniProt) in 2013. Nucleic Acids Res (2012) 9.65
The UCSC Genome Browser database: extensions and updates 2013. Nucleic Acids Res (2012) 9.02
Saccharomyces Genome Database: the genomics resource of budding yeast. Nucleic Acids Res (2011) 8.57
Gene Ontology annotations and resources. Nucleic Acids Res (2012) 6.13
The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res (2011) 5.79
The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Nature (2008) 5.42
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes. Genome Biol (2004) 4.94
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science (2012) 4.93
Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78. Nat Biotechnol (2004) 4.85
Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training. Genome Res (2008) 4.38
The genome portal of the Department of Energy Joint Genome Institute. Nucleic Acids Res (2011) 3.26
The fungi: 1, 2, 3 ... 5.1 million species? Am J Bot (2011) 2.91
Obligate biotrophy features unraveled by the genomic analysis of rust fungi. Proc Natl Acad Sci U S A (2011) 2.84
BLAST: a more efficient report with usability improvements. Nucleic Acids Res (2013) 2.77
The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Science (2011) 2.67
Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi. PLoS Pathog (2012) 2.66
Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. PLoS Genet (2011) 2.58
Genome sequence of the model mushroom Schizophyllum commune. Nat Biotechnol (2010) 2.44
Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris. Nat Biotechnol (2011) 2.11
The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources. Nucleic Acids Res (2011) 2.07
Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in Neurospora crassa. G3 (Bethesda) (2011) 1.17
Sequencing the fungal tree of life. New Phytol (2011) 1.14
Initial sequencing and comparative analysis of the mouse genome. Nature (2002) 96.15
Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature (2004) 24.40
The Sorghum bicolor genome and the diversification of grasses. Nature (2009) 14.62
The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions. Nucleic Acids Res (2007) 13.81
VISTA: computational tools for comparative genomics. Nucleic Acids Res (2004) 13.52
The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science (2007) 11.15
In vivo enhancer analysis of human conserved non-coding sequences. Nature (2006) 10.60
AVID: A global alignment program. Genome Res (2003) 10.06
Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization. Science (2007) 9.79
Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution. Genome Res (2005) 8.38
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science (2007) 8.12
The amphioxus genome and the evolution of the chordate karyotype. Nature (2008) 8.03
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods. Nat Methods (2007) 7.73
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite. Nature (2007) 7.42
The integrated microbial genomes (IMG) system. Nucleic Acids Res (2006) 7.34
rVista for comparative sequence-based discovery of functional transcription factor binding sites. Genome Res (2002) 7.33
IMG/M: a data management and analysis system for metagenomes. Nucleic Acids Res (2007) 7.18
Integrative annotation of 21,037 human genes validated by full-length cDNA clones. PLoS Biol (2004) 7.17
VISTA Enhancer Browser--a database of tissue-specific human enhancers. Nucleic Acids Res (2006) 7.04
The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature (2008) 6.70
The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans. Nature (2008) 6.69
Visualizing genomes: techniques and challenges. Nat Methods (2010) 6.66
The ecoresponsive genome of Daphnia pulex. Science (2011) 6.55
The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res (2011) 5.79
The Trichoplax genome and the nature of placozoans. Nature (2008) 5.56
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science (2012) 4.93
Glocal alignment: finding rearrangements during alignment. Bioinformatics (2003) 4.88
Strategies and tools for whole-genome alignments. Genome Res (2003) 4.86
The genome of the Western clawed frog Xenopus tropicalis. Science (2010) 4.70
Characterization of evolutionary rates and constraints in three Mammalian genomes. Genome Res (2004) 4.45
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Science (2009) 4.05
Cross-species sequence comparisons: a review of methods and available resources. Genome Res (2003) 3.90
Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Science (2010) 3.70
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Proc Natl Acad Sci U S A (2007) 3.58
Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Nat Biotechnol (2007) 3.42
The genome portal of the Department of Energy Joint Genome Institute. Nucleic Acids Res (2011) 3.26
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science (2011) 3.10
A human-curated annotation of the Candida albicans genome. PLoS Genet (2005) 3.04
High-resolution metagenomics targets specific functional types in complex microbial communities. Nat Biotechnol (2008) 2.99
The genome of Naegleria gruberi illuminates early eukaryotic versatility. Cell (2010) 2.93
TB database: an integrated platform for tuberculosis research. Nucleic Acids Res (2008) 2.71
Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. Proc Natl Acad Sci U S A (2009) 2.71
An experimental metagenome data management and analysis system. Bioinformatics (2006) 2.71
Assessing the impact of alternative splicing on domain interactions in the human proteome. J Proteome Res (2004) 2.71
The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Science (2011) 2.67
Automated whole-genome multiple alignment of rat, mouse, and human. Genome Res (2004) 2.64
Combinatorial regulation of endothelial gene expression by ets and forkhead transcription factors. Cell (2008) 2.60
Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. PLoS Genet (2011) 2.58
RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes. Nucleic Acids Res (2009) 2.53
The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Plant Cell (2010) 2.47
Genome sequence of the model mushroom Schizophyllum commune. Nat Biotechnol (2010) 2.44
The DNA sequence and biology of human chromosome 19. Nature (2004) 2.29
The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion. PLoS Genet (2009) 2.29
Pan genome of the phytoplankton Emiliania underpins its global distribution. Nature (2013) 2.26
The splicing regulatory element, UGCAUG, is phylogenetically and spatially conserved in introns that flank tissue-specific alternative exons. Nucleic Acids Res (2005) 2.20
Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. Genome Biol (2011) 2.17
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. Nature (2012) 2.15
Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris. Nat Biotechnol (2011) 2.11
Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88. Genome Res (2011) 2.03
Phylo-VISTA: interactive visualization of multiple DNA sequence alignments. Bioinformatics (2004) 1.97
The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry. PLoS Genet (2012) 1.95
RegTransBase--a database of regulatory sequences and interactions in a wide range of prokaryotic genomes. Nucleic Acids Res (2006) 1.95
A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing. Nucleic Acids Res (2007) 1.94
Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis. Proc Natl Acad Sci U S A (2013) 1.94
A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites. Curr Biol (2010) 1.93
RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach. Nucleic Acids Res (2010) 1.81
Trends in prokaryotic evolution revealed by comparison of closely related bacterial and archaeal genomes. J Bacteriol (2008) 1.79