Published in Cytometry A on February 14, 2014
BayesFlow: latent modeling of flow cytometry cell populations. BMC Bioinformatics (2016) 1.41
Methods for discovery and characterization of cell subsets in high dimensional mass cytometry data. Methods (2015) 1.06
Consistent quantitative gene product expression: #1. Automated identification of regenerating bone marrow cell populations using support vector machines. Cytometry A (2016) 0.99
SWIFT-scalable clustering for automated identification of rare cell populations in large, high-dimensional flow cytometry datasets, part 2: biological evaluation. Cytometry A (2014) 0.98
Algorithmic Tools for Mining High-Dimensional Cytometry Data. J Immunol (2015) 0.86
Computational flow cytometry: helping to make sense of high-dimensional immunology data. Nat Rev Immunol (2016) 0.86
A non-parametric Bayesian model for joint cell clustering and cluster matching: identification of anomalous sample phenotypes with random effects. BMC Bioinformatics (2014) 0.83
An animated landscape representation of CD4+ T-cell differentiation, variability, and plasticity: insights into the behavior of populations versus cells. Eur J Immunol (2014) 0.83
Competitive SWIFT cluster templates enhance detection of aging changes. Cytometry A (2015) 0.81
Computational prediction of manually gated rare cells in flow cytometry data. Cytometry A (2015) 0.80
Toward deterministic and semiautomated SPADE analysis. Cytometry A (2017) 0.75
Similarity measure and domain adaptation in multiple mixture model clustering: An application to image processing. PLoS One (2017) 0.75
Automated Analysis of Flow Cytometry Data to Reduce Inter-Lab Variation in the Detection of Major Histocompatibility Complex Multimer-Binding T Cells. Front Immunol (2017) 0.75
Seventeen-colour flow cytometry: unravelling the immune system. Nat Rev Immunol (2004) 7.37
Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE. Nat Biotechnol (2011) 5.46
Automated gating of flow cytometry data via robust model-based clustering. Cytometry A (2008) 5.10
Automated high-dimensional flow cytometric data analysis. Proc Natl Acad Sci U S A (2009) 4.91
Standardization of cytokine flow cytometry assays. BMC Immunol (2005) 4.55
Statistical mixture modeling for cell subtype identification in flow cytometry. Cytometry A (2008) 3.06
flowClust: a Bioconductor package for automated gating of flow cytometry data. BMC Bioinformatics (2009) 2.58
Rapid cell population identification in flow cytometry data. Cytometry A (2011) 2.57
Data reduction for spectral clustering to analyze high throughput flow cytometry data. BMC Bioinformatics (2010) 2.46
Elucidation of seventeen human peripheral blood B-cell subsets and quantification of the tetanus response using a density-based method for the automated identification of cell populations in multidimensional flow cytometry data. Cytometry B Clin Cytom (2010) 2.38
Merging mixture components for cell population identification in flow cytometry. Adv Bioinformatics (2009) 2.18
Automated identification of subpopulations in flow cytometric list mode data using cluster analysis. Cytometry (1985) 1.93
Combining Mixture Components for Clustering. J Comput Graph Stat (2010) 1.65
flowPeaks: a fast unsupervised clustering for flow cytometry data via K-means and density peak finding. Bioinformatics (2012) 1.53
Nine-color flow cytometry for accurate measurement of T cell subsets and cytokine responses. Part I: Panel design by an empiric approach. Cytometry A (2008) 1.40
Hierarchical modeling for rare event detection and cell subset alignment across flow cytometry samples. PLoS Comput Biol (2013) 1.35
The curvHDR method for gating flow cytometry samples. BMC Bioinformatics (2010) 1.33
The flow of cytometry into systems biology. Brief Funct Genomic Proteomic (2007) 0.99
T regulatory and primed uncommitted CD4 T cells express CD73, which suppresses effector CD4 T cells by converting 5'-adenosine monophosphate to adenosine. J Immunol (2006) 3.40
Critical assessment of automated flow cytometry data analysis techniques. Nat Methods (2013) 3.30
Lossless generalized-lSB data embedding. IEEE Trans Image Process (2005) 2.03
Quantifying the early immune response and adaptive immune response kinetics in mice infected with influenza A virus. J Virol (2010) 1.80
Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign. BMC Bioinformatics (2007) 1.79
Simulation and prediction of the adaptive immune response to influenza A virus infection. J Virol (2009) 1.76
Amphiregulin, a TH2 cytokine enhancing resistance to nematodes. Science (2006) 1.44
Inorganic nanoparticles for cancer imaging and therapy. J Control Release (2011) 1.42
Multisite, randomized, double-blind, placebo-controlled pilot clinical trial to evaluate the efficacy of buspirone as a relapse-prevention treatment for cocaine dependence. J Clin Psychiatry (2014) 1.26
Protein vaccines induce uncommitted IL-2-secreting human and mouse CD4 T cells, whereas infections induce more IFN-gamma-secreting cells. J Immunol (2006) 1.26
Modulation of single-cell IgG secretion frequency and rates in human memory B cells by CpG DNA, CD40L, IL-21, and cell division. J Immunol (2009) 1.22
PARTS: probabilistic alignment for RNA joinT secondary structure prediction. Nucleic Acids Res (2008) 1.22
Measuring the frequency of mouse and human cytotoxic T cells by the Lysispot assay: independent regulation of cytokine secretion and short-term killing. Nat Med (2003) 1.17
Mandibular midline supernumerary tooth associated with agenesis of permanent central incisors: a diagnostic conundrum. Stomatologija (2012) 1.15
Human follicular lymphoma CD39+-infiltrating T cells contribute to adenosine-mediated T cell hyporesponsiveness. J Immunol (2009) 1.13
Collagen distribution and expression of collagen-binding alpha1beta1 (VLA-1) and alpha2beta1 (VLA-2) integrins on CD4 and CD8 T cells during influenza infection. J Immunol (2007) 1.10
Localization of impacted maxillary canines using panoramic radiography. J Oral Sci (2009) 1.08
Purkinje cell loss in experimental autoimmune encephalomyelitis. Neuroimage (2009) 1.07
Lossless watermarking for image authentication: a new framework and an implementation. IEEE Trans Image Process (2006) 1.06
Adaptive sensing and optimal power allocation for wireless video sensors with sigma-delta imager. IEEE Trans Image Process (2010) 1.06
Hypoxia inducible factor-1: its potential role in cerebral ischemia. Cell Mol Neurobiol (2012) 1.05
TurboFold: iterative probabilistic estimation of secondary structures for multiple RNA sequences. BMC Bioinformatics (2011) 1.03
Automated analysis of two- and three-color fluorescent Elispot (Fluorospot) assays for cytokine secretion. Comput Methods Programs Biomed (2008) 1.01
Anatomic pathology laboratory information systems: a review. Adv Anat Pathol (2012) 0.99
Role of Moringa oleifera in regulation of diabetes-induced oxidative stress. Asian Pac J Trop Med (2013) 0.98
Current approaches to stabilising and analysing proteins during microencapsulation in PLGA. Expert Opin Drug Deliv (2009) 0.98
An 11-color flow cytometric assay for identifying, phenotyping, and assessing endocytic ability of peripheral blood dendritic cell subsets in a single platform. J Immunol Methods (2008) 0.98
SWIFT-scalable clustering for automated identification of rare cell populations in large, high-dimensional flow cytometry datasets, part 2: biological evaluation. Cytometry A (2014) 0.98
The acute environment, rather than T cell subset pre-commitment, regulates expression of the human T cell cytokine amphiregulin. PLoS One (2012) 0.96
Current trend of poisoning--a hospital profile. J Indian Med Assoc (2006) 0.96
A randomized trial of concurrent smoking-cessation and substance use disorder treatment in stimulant-dependent smokers. J Clin Psychiatry (2014) 0.96
Evaluation of buspirone for relapse-prevention in adults with cocaine dependence: an efficacy trial conducted in the real world. Contemp Clin Trials (2012) 0.96
Quality care during labour and birth: a multi-country analysis of health system bottlenecks and potential solutions. BMC Pregnancy Childbirth (2015) 0.95
Cross-sectional Serosurvey of Crimean-Congo Hemorrhagic Fever Virus IgG in Livestock, India, 2013-2014. Emerg Infect Dis (2015) 0.95
Clinical implications of referral bias in the diagnostic performance of exercise testing for coronary artery disease. J Am Heart Assoc (2013) 0.94
Dynalign II: common secondary structure prediction for RNA homologs with domain insertions. Nucleic Acids Res (2014) 0.93
Scaling up quality care for mothers and newborns around the time of birth: an overview of methods and analyses of intervention-specific bottlenecks and solutions. BMC Pregnancy Childbirth (2015) 0.93
The balance between influenza- and RSV-specific CD4 T cells secreting IL-10 or IFNgamma in young and healthy-elderly subjects. Mech Ageing Dev (2005) 0.93
Stochastic sampling of the RNA structural alignment space. Nucleic Acids Res (2009) 0.93
Human infant respiratory syncytial virus (RSV)-specific type 1 and 2 cytokine responses ex vivo during primary RSV infection. J Infect Dis (2007) 0.93
Human basophils express amphiregulin in response to T cell-derived IL-3. J Allergy Clin Immunol (2010) 0.92
U3 region in the HIV-1 genome adopts a G-quadruplex structure in its RNA and DNA sequence. Biochemistry (2014) 0.92
Optimal spread spectrum watermark embedding via a multistep feasibility formulation. IEEE Trans Image Process (2009) 0.91
Increase in IFNγ(-)IL-2(+) cells in recent human CD4 T cell responses to 2009 pandemic H1N1 influenza. PLoS One (2013) 0.91
CD73 and Ly-6A/E distinguish in vivo primed but uncommitted mouse CD4 T cells from type 1 or type 2 effector cells. J Immunol (2005) 0.90
Immunogenetic basis of HIV-1 infection, transmission and disease progression. Vaccine (2008) 0.90
Ki-67 expression reveals strong, transient influenza specific CD4 T cell responses after adult vaccination. Vaccine (2012) 0.88
CD4+ T-cell responses among adults and young children in response to Streptococcus pneumoniae and Haemophilus influenzae vaccine candidate protein antigens. Vaccine (2013) 0.88
Plekhg4 is a novel Dbl family guanine nucleotide exchange factor protein for rho family GTPases. J Biol Chem (2013) 0.88
Association of facet tropism with lumbar disc herniation. Eur Spine J (2012) 0.87
Attenuation of protein adsorption on static and oscillating magnetostrictive nanowires. Nano Lett (2005) 0.87
Integration of digital gross pathology images for enterprise-wide access. J Pathol Inform (2012) 0.86
Hierarchical watermarking for secure image authentication with localization. IEEE Trans Image Process (2002) 0.86
Design considerations for a study to evaluate the impact of smoking cessation treatment on stimulant use outcomes in stimulant-dependent individuals. Contemp Clin Trials (2011) 0.85
Management of scalp arterio-venous malformation: case series and review of literature. Br J Neurosurg (2012) 0.85
Label-free, arrayed sensing of immune response to influenza antigens. Talanta (2010) 0.84
Enumeration of cytotoxic CD8 T cells ex vivo during the response to Listeria monocytogenes infection. Infect Immun (2008) 0.84
Dendritic cells: the immune information management experts. Nat Immunol (2004) 0.84
Paternal antigen-bearing cells transferred during insemination do not stimulate anti-paternal CD8+ T cells: role of estradiol in locally inhibiting CD8+ T cell responses. J Immunol (2006) 0.83
An animated landscape representation of CD4+ T-cell differentiation, variability, and plasticity: insights into the behavior of populations versus cells. Eur J Immunol (2014) 0.83
Molecular-scale force measurement in a coiled-coil peptide dimer by electron spin resonance. J Am Chem Soc (2009) 0.83
Camera scheduling and energy allocation for lifetime maximization in user-centric visual sensor networks. IEEE Trans Image Process (2010) 0.82
Estradiol-induced vaginal mucus inhibits antigen penetration and CD8(+) T cell priming in response to intravaginal immunization. Vaccine (2009) 0.82
Menopause and the oral cavity. Indian J Endocrinol Metab (2012) 0.82
Thoraco-abdominal pressure gradients during the phases of respiration contribute to gastroesophageal reflux disease. Dig Dis Sci (2011) 0.82
Evaluation of the clinical signs of anterior cruciate ligament and meniscal injuries. Indian J Orthop (2009) 0.81
Immunoregulation of fetal and anti-paternal immune responses. Immunol Res (2008) 0.81
Antibiotics in dental practice: how justified are we. Int Dent J (2014) 0.81
Microbubble array diffusion assay for the detection of cell secreted factors. Lab Chip (2014) 0.80
Design of a Genomics Curriculum: Competencies for Practicing Pathologists. Arch Pathol Lab Med (2015) 0.80
Mucosal fixed drug eruption in a patient treated with ornidazole. J Dermatol Case Rep (2012) 0.80
One-step fabrication of polymeric Janus nanoparticles for drug delivery. Langmuir (2012) 0.79
Spatial resolution in Raman spectroscopy. Faraday Discuss (2015) 0.79
Palatal and labially impacted maxillary canine-associated dental anomalies: a comparative study. J Contemp Dent Pract (2009) 0.79
Two-dimensional transforms for device color correction and calibration. IEEE Trans Image Process (2005) 0.78
Concentration-dependent antagonistic persuasion of SDS and naphthalene derivatives on the fibrillation of stem bromelain. Arch Biochem Biophys (2013) 0.78
Comparative iron oxide nanoparticle cellular dosimetry and response in mice by the inhalation and liquid cell culture exposure routes. Part Fibre Toxicol (2014) 0.78
siRNA: a new approach to target neuropathic pain. BioDrugs (2012) 0.78
Mechanism of HIV-1 RNA dimerization in the central region of the genome and significance for viral evolution. J Biol Chem (2013) 0.78
How to "spot" a real killer. Trends Immunol (2003) 0.77
In silico analysis of ubiquitin/ubiquitin-like modifiers and their conjugating enzymes in Entamoeba species. Parasitol Res (2012) 0.77
Role of a LIF antagonist in LIF and OSM induced MMP-1, MMP-3, and TIMP-1 expression by primary articular chondrocytes. Cytokine (2009) 0.77
Non-syndromic multiple talon cusps in siblings. Indian J Dent Res (2014) 0.77
A regularized model-based optimization framework for pan-sharpening. IEEE Trans Image Process (2014) 0.76
Adverse outcomes in hospitalized patients who develop ST-elevation myocardial infarction. Crit Pathw Cardiol (2014) 0.76
Image microarrays derived from tissue microarrays (IMA-TMA): New resource for computer-aided diagnostic algorithm development. J Pathol Inform (2012) 0.76
Clinical and radiological instability following standard fenestration discectomy. Indian J Orthop (2009) 0.76
Minimally invasive osteosynthesis of distal tibial fractures using anterolateral locking plate: Evaluation of results and complications. Chin J Traumatol (2016) 0.75
Biomedical applications of nano-antioxidant. Methods Mol Biol (2013) 0.75
Utilizing a Two-stage Design to Investigate the Safety and Potential Efficacy of Monthly Naltrexone Plus Once-daily Bupropion as a Treatment for Methamphetamine Use Disorder. J Addict Med (2016) 0.75
An information transmission measure for the analysis of effective connectivity among cortical neurons. Conf Proc IEEE Eng Med Biol Soc (2010) 0.75
Genomic architecture of HIV-1 infection: current status & challenges. Indian J Med Res (2013) 0.75
Utility of saliva and hair follicles in donor selection for hematopoietic stem cell transplantation and chimerism monitoring. Chimerism (2012) 0.75