Published in Brief Funct Genomics on July 01, 2015
Pretata: predicting TATA binding proteins with novel features and dimensionality reduction strategy. BMC Syst Biol (2016) 1.23
iMiRNA-SSF: Improving the Identification of MicroRNA Precursors by Combining Negative Sets with Different Distributions. Sci Rep (2016) 1.21
On the Computational Power of Spiking Neural P Systems with Self-Organization. Sci Rep (2016) 1.13
DNA binding protein identification by combining pseudo amino acid composition and profile-based protein representation. Sci Rep (2015) 0.96
Accurate Identification of Cancerlectins through Hybrid Machine Learning Technology. Int J Genomics (2016) 0.91
Complex Network Clustering by a Multi-objective Evolutionary Algorithm Based on Decomposition and Membrane Structure. Sci Rep (2016) 0.83
Epigallocatechin-3-O-gallate up-regulates microRNA-let-7b expression by activating 67-kDa laminin receptor signaling in melanoma cells. Sci Rep (2016) 0.82
4C-seq revealed long-range interactions of a functional enhancer at the 8q24 prostate cancer risk locus. Sci Rep (2016) 0.79
Identifying novel genes and chemicals related to nasopharyngeal cancer in a heterogeneous network. Sci Rep (2016) 0.79
A Comprehensive Analysis of miRNA/isomiR Expression with Gender Difference. PLoS One (2016) 0.78
A Dynamic 3D Graphical Representation for RNA Structure Analysis and Its Application in Non-Coding RNA Classification. PLoS One (2016) 0.77
Statistical Approaches for the Construction and Interpretation of Human Protein-Protein Interaction Network. Biomed Res Int (2016) 0.77
Identification of Multi-Functional Enzyme with Multi-Label Classifier. PLoS One (2016) 0.77
Network Consistency Projection for Human miRNA-Disease Associations Inference. Sci Rep (2016) 0.76
Efficient Vaccine Distribution Based on a Hybrid Compartmental Model. PLoS One (2016) 0.76
Protein Remote Homology Detection Based on an Ensemble Learning Approach. Biomed Res Int (2016) 0.76
Robust High-dimensional Bioinformatics Data Streams Mining by ODR-ioVFDT. Sci Rep (2017) 0.75
Computational identification of putative lincRNAs in mouse embryonic stem cell. Sci Rep (2016) 0.75
Uncovering Driver DNA Methylation Events in Nonsmoking Early Stage Lung Adenocarcinoma. Biomed Res Int (2016) 0.75
A Metric on the Space of Partly Reduced Phylogenetic Networks. Biomed Res Int (2016) 0.75
Comparative Screening of Digestion Tract Toxic Genes in Proteus mirabilis. PLoS One (2016) 0.75
A Reconfiguration Strategy of Distribution Networks Considering Node Importance. PLoS One (2016) 0.75
Extracting microRNA-gene relations from biomedical literature using distant supervision. PLoS One (2017) 0.75
OAHG: an integrated resource for annotating human genes with multi-level ontologies. Sci Rep (2016) 0.75
Constructing Phylogenetic Networks Based on the Isomorphism of Datasets. Biomed Res Int (2016) 0.75
The Use of Gene Ontology Term and KEGG Pathway Enrichment for Analysis of Drug Half-Life. PLoS One (2016) 0.75
A path-based measurement for human miRNA functional similarities using miRNA-disease associations. Sci Rep (2016) 0.75
Large-scale prediction of microRNA-disease associations by combinatorial prioritization algorithm. Sci Rep (2017) 0.75
miRepress: modelling gene expression regulation by microRNA with non-conventional binding sites. Sci Rep (2016) 0.75
Overlapping Community Detection based on Network Decomposition. Sci Rep (2016) 0.75
A Shortest-Path-Based Method for the Analysis and Prediction of Fruit-Related Genes in Arabidopsis thaliana. PLoS One (2016) 0.75
A network-based method using a random walk with restart algorithm and screening tests to identify novel genes associated with Menière's disease. PLoS One (2017) 0.75
An index-based algorithm for fast on-line query processing of latent semantic analysis. PLoS One (2017) 0.75
Using computer simulation models to investigate the most promising microRNAs to improve muscle regeneration during ageing. Sci Rep (2017) 0.75
Chronic obstructive pulmonary disease candidate gene prioritization based on metabolic networks and functional information. PLoS One (2017) 0.75
A novel approach for predicting microbe-disease associations by bi-random walk on the heterogeneous network. PLoS One (2017) 0.75
miR2Disease: a manually curated database for microRNA deregulation in human disease. Nucleic Acids Res (2008) 6.30
The dragon strikes: lessons from the Wenchuan earthquake. Anesth Analg (2010) 2.78
China's facility-based birth strategy and neonatal mortality: a population-based epidemiological study. Lancet (2011) 2.64
Atomic layers of hybridized boron nitride and graphene domains. Nat Mater (2010) 2.57
Biological functions of microRNAs: a review. J Physiol Biochem (2010) 2.38
Survey of MapReduce frame operation in bioinformatics. Brief Bioinform (2013) 2.28
Estradiol-regulated microRNAs control estradiol response in breast cancer cells. Nucleic Acids Res (2009) 2.27
Direct laser writing of micro-supercapacitors on hydrated graphite oxide films. Nat Nanotechnol (2011) 2.02
Integrative approaches for predicting microRNA function and prioritizing disease-related microRNA using biological interaction networks. Brief Bioinform (2015) 1.82
Graphene quantum dots derived from carbon fibers. Nano Lett (2012) 1.79
HIV-1 disease-influencing effects associated with ZNRD1, HCP5 and HLA-C alleles are attributable mainly to either HLA-A10 or HLA-B*57 alleles. PLoS One (2008) 1.69
nDNA-Prot: identification of DNA-binding proteins based on unbalanced classification. BMC Bioinformatics (2014) 1.65
NF-kappaB regulation of endothelial cell function during LPS-induced toxemia and cancer. J Clin Invest (2006) 1.61
Methamphetamine enhances HIV infection of macrophages. Am J Pathol (2008) 1.60
Dendritic cell (DC)-specific targeting reveals Stat3 as a negative regulator of DC function. J Immunol (2010) 1.53
Alcohol exposure alters DNA methylation profiles in mouse embryos at early neurulation. Epigenetics (2009) 1.53
Enhanced serodiagnostic utility of novel Mycobacterium tuberculosis polyproteins. J Infect (2012) 1.52
Direct growth of graphene/hexagonal boron nitride stacked layers. Nano Lett (2011) 1.43
TiSGeD: a database for tissue-specific genes. Bioinformatics (2010) 1.41
Phosphorylation of IRF4 by ROCK2 regulates IL-17 and IL-21 production and the development of autoimmunity in mice. J Clin Invest (2010) 1.40
Improved and Promising Identification of Human MicroRNAs by Incorporating a High-Quality Negative Set. IEEE/ACM Trans Comput Biol Bioinform (2015) 1.39
Prioritization of disease microRNAs through a human phenome-microRNAome network. BMC Syst Biol (2010) 1.37
Hierarchical classification of protein folds using a novel ensemble classifier. PLoS One (2013) 1.36
Prediction and validation of disease genes using HeteSim Scores. IEEE/ACM Trans Comput Biol Bioinform (2016) 1.33
Inferring microRNA-disease associations by random walk on a heterogeneous network with multiple data sources. IEEE/ACM Trans Comput Biol Bioinform (2016) 1.33
A critical function of toll-like receptor-3 in the induction of anti-human immunodeficiency virus activities in macrophages. Immunology (2010) 1.27
Time-resolved ultrafast photocurrents and terahertz generation in freely suspended graphene. Nat Commun (2012) 1.22
AKT alters genome-wide estrogen receptor alpha binding and impacts estrogen signaling in breast cancer. Mol Cell Biol (2008) 1.21
Potential roles of microRNAs in regulating long intergenic noncoding RNAs. BMC Med Genomics (2013) 1.19
Super-stretchable, transparent carbon nanotube-based capacitive strain sensors for human motion detection. Sci Rep (2013) 1.19
Neural network analysis of lymphoma microarray data: prognosis and diagnosis near-perfect. BMC Bioinformatics (2003) 1.17
First report of the multiresistance gene cfr in Streptococcus suis. Antimicrob Agents Chemother (2013) 1.17
Lighter: fast and memory-efficient sequencing error correction without counting. Genome Biol (2014) 1.16
Improving reporting of adverse events and adverse drug reactions following injections of Chinese materia medica. J Evid Based Med (2010) 1.16
CD56+ T cells inhibit hepatitis C virus replication in human hepatocytes. Hepatology (2009) 1.16
CCR2 expression by brain microvascular endothelial cells is critical for macrophage transendothelial migration in response to CCL2. Microvasc Res (2005) 1.15
Parallel Hough Transform-based straight line detection and its FPGA implementation in embedded vision. Sensors (Basel) (2013) 1.14
Unfolding the pathophysiological role of bioactive lysophospholipids. Curr Drug Targets Immune Endocr Metabol Disord (2003) 1.13
Regulatory long non-coding RNA and its functions. J Physiol Biochem (2012) 1.13
Tunable bandgap in graphene by the controlled adsorption of water molecules. Small (2010) 1.13
Morphine enhances HIV infection of neonatal macrophages. Pediatr Res (2003) 1.13
Using distances between Top-n-gram and residue pairs for protein remote homology detection. BMC Bioinformatics (2014) 1.11
A global characterization and identification of multifunctional enzymes. PLoS One (2012) 1.09
In vitro antimicrobial susceptibility of Streptococcus suis strains isolated from clinically healthy sows in China. Vet Microbiol (2008) 1.08
Expression and regulation of antiviral protein APOBEC3G in human neuronal cells. J Neuroimmunol (2008) 1.08
Where is the blood-brain barrier ... really? J Neurosci Res (2005) 1.08
Alcohol potentiates HIV-1 infection of human blood mononuclear phagocytes. Alcohol Clin Exp Res (2002) 1.06
An organic photochromic compound: (2S)-2'-ethoxy-1,3,3-trimethyl-6'-(piperidin-1-yl)spiro[indoline-2,3'-3'H-naphtho[2,1-b][1,4]oxazine]. Acta Crystallogr C (2009) 1.06
Activation of Rho GTPases in Smith-Lemli-Opitz syndrome: pathophysiological and clinical implications. Hum Mol Genet (2010) 1.05
Transcellular transport of CCL2 across brain microvascular endothelial cells. J Neurochem (2008) 1.04
Time-resolved picosecond photocurrents in contacted carbon nanotubes. Nano Lett (2010) 1.02
Enhanced Protein Fold Prediction Method Through a Novel Feature Extraction Technique. IEEE Trans Nanobioscience (2015) 1.00
Calculating the burden of disease of avian-origin H7N9 infections in China. BMJ Open (2014) 1.00
A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer. BMC Syst Biol (2011) 0.99
Neurokinin-1 receptor antagonist (aprepitant) suppresses HIV-1 infection of microglia/macrophages. J Neuroimmune Pharmacol (2008) 0.99
Briefing in family characteristics of microRNAs and their applications in cancer research. Biochim Biophys Acta (2013) 0.99
GM-CSF contributes to aortic aneurysms resulting from SMAD3 deficiency. J Clin Invest (2013) 0.99
An overview of SNP interactions in genome-wide association studies. Brief Funct Genomics (2014) 0.99
Phospholipase dzeta2 drives vesicular secretion of auxin for its polar cell-cell transport in the transition zone of the root apex. Plant Signal Behav (2007) 0.99
Sequencing and de novo analysis of Crassostrea angulata (Fujian oyster) from 8 different developing phases using 454 GSFlx. PLoS One (2012) 0.98
Polarization of primary human monocytes by IFN-gamma induces chromatin changes and recruits RNA Pol II to the TNF-alpha promoter. J Immunol (2008) 0.97
Interleukin-1beta stimulates macrophage inflammatory protein-1alpha and -1beta expression in human neuronal cells (NT2-N). J Neurochem (2003) 0.97
Machinable long PVP-stabilized silver nanowires. Chemistry (2004) 0.97
Tunable electronics in large-area atomic layers of boron-nitrogen-carbon. Nano Lett (2013) 0.97
N,N'-p-Phenyl-enediisonicotinamide monohydrate. Acta Crystallogr Sect E Struct Rep Online (2009) 0.96
Omega-3 polyunsaturated fatty acid supplementation improves neurologic recovery and attenuates white matter injury after experimental traumatic brain injury. J Cereb Blood Flow Metab (2013) 0.96
Electrically controllable selective reflection of chiral nematic liquid crystal/chiral ionic liquid composites. Adv Mater (2010) 0.95
A study of miRNAs targets prediction and experimental validation. Protein Cell (2010) 0.95
Genome-wide prediction of cis-acting RNA elements regulating tissue-specific pre-mRNA alternative splicing. BMC Genomics (2009) 0.95
Alpha-defensins inhibit HIV infection of macrophages through upregulation of CC-chemokines. AIDS (2004) 0.95
Computational identification and characteristics of novel microRNAs from the silkworm (Bombyx mori L.). Mol Biol Rep (2009) 0.94
Brainlab: A Python Toolkit to Aid in the Design, Simulation, and Analysis of Spiking Neural Networks with the NeoCortical Simulator. Front Neuroinform (2009) 0.93
Functional expression of CCR2 by human fetal astrocytes. J Neurosci Res (2002) 0.93
Anomalous high capacitance in a coaxial single nanowire capacitor. Nat Commun (2012) 0.92
Two-stent strategy for renal artery stenosis with bifurcation lesion. J Zhejiang Univ Sci B (2010) 0.92
Treatment with interleukin-12/23p40 antibody attenuates acute cardiac allograft rejection. Transplantation (2011) 0.92
Expression of open reading frames in silkworm pupal cDNA library. Appl Biochem Biotechnol (2007) 0.92
PI-3 K/AKT and ERK signaling pathways mediate leptin-induced inhibition of PPARgamma gene expression in primary rat hepatic stellate cells. Mol Cell Biochem (2009) 0.91
Directly synthesized strong, highly conducting, transparent single-walled carbon nanotube films. Nano Lett (2007) 0.91
Framework and implications of virtual neurorobotics. Front Neurosci (2008) 0.91
Thrombus aspiration plus intra-infarct-related artery administration of tirofiban improves myocardial perfusion during primary angioplasty for acute myocardial infarction. Chin Med J (Engl) (2010) 0.91
Biological functions of microRNAs. Bioorg Khim (2011) 0.89
Endovascular treatment of renal artery aneurysms and renal arteriovenous fistulas. J Vasc Surg (2013) 0.89
Exposure to supernatants of macrophages that phagocytized dead mesenchymal stem cells improves hypoxic cardiomyocytes survival. Int J Cardiol (2012) 0.89
Complete sequence and organization of Antheraea pernyi nucleopolyhedrovirus, a dr-rich baculovirus. BMC Genomics (2007) 0.89
PaGenBase: a pattern gene database for the global and dynamic understanding of gene function. PLoS One (2013) 0.88
Interleukin-1beta induces macrophage inflammatory protein-1beta expression in human hepatocytes. Cell Immunol (2003) 0.88
An effort to use human-based exome capture methods to analyze chimpanzee and macaque exomes. PLoS One (2012) 0.88
A non-peptide substance P antagonist down-regulates SP mRNA expression in human mononuclear phagocytes. J Neuroimmunol (2002) 0.88
Enhanced thermopower of graphene films with oxygen plasma treatment. ACS Nano (2011) 0.88
Using single-walled carbon nanotubes nonwoven films as scaffolds to enhance long-term cell proliferation in vitro. J Biomed Mater Res A (2006) 0.87
A gain-of-function mutation in the ROC1 gene alters plant architecture in Arabidopsis. New Phytol (2012) 0.87
CD8+ T cell depletion amplifies hepatitis C virus replication in peripheral blood mononuclear cells. J Infect Dis (2005) 0.87
Effects of single-walled carbon nanotubes on the functions of plasma proteins and potentials in vascular prostheses. Nanomedicine (2005) 0.87
Efficacy of removing dislocated lens using intravitreal phacoemulsification. Eye Sci (2012) 0.87