Published in Appl Environ Microbiol on May 01, 1988
Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev (1995) 62.96
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl Environ Microbiol (1990) 34.40
Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. J Bacteriol (1990) 28.74
Archaea in coastal marine environments. Proc Natl Acad Sci U S A (1992) 24.98
Molecular and microscopic identification of sulfate-reducing bacteria in multispecies biofilms. Appl Environ Microbiol (1992) 10.81
Bias in template-to-product ratios in multitemplate PCR. Appl Environ Microbiol (1998) 10.53
Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens. Appl Environ Microbiol (1994) 9.21
Probing activated sludge with oligonucleotides specific for proteobacteria: inadequacy of culture-dependent methods for describing microbial community structure. Appl Environ Microbiol (1993) 7.17
Dual staining of natural bacterioplankton with 4',6-diamidino-2-phenylindole and fluorescent oligonucleotide probes targeting kingdom-level 16S rRNA sequences. Appl Environ Microbiol (1992) 6.83
Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel. Appl Environ Microbiol (1997) 6.51
Phylogenetic analysis of a natural marine bacterioplankton population by rRNA gene cloning and sequencing. Appl Environ Microbiol (1991) 6.43
Characterization of universal small-subunit rRNA hybridization probes for quantitative molecular microbial ecology studies. Appl Environ Microbiol (1996) 5.99
The division between fast- and slow-growing species corresponds to natural relationships among the mycobacteria. J Bacteriol (1990) 5.60
Natural relationships among sulfate-reducing eubacteria. J Bacteriol (1989) 5.35
Simple, rapid method for direct isolation of nucleic acids from aquatic environments. Appl Environ Microbiol (1989) 5.26
Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5'-nuclease assays. Appl Environ Microbiol (2000) 5.24
Alterations of the dominant faecal bacterial groups in patients with Crohn's disease of the colon. Gut (2003) 5.19
Seasonal and spatial variability of bacterial and archaeal assemblages in the coastal waters near Anvers Island, Antarctica. Appl Environ Microbiol (1998) 4.85
Quantification of methanogenic groups in anaerobic biological reactors by oligonucleotide probe hybridization. Appl Environ Microbiol (1994) 4.84
A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov. Proc Natl Acad Sci U S A (1996) 4.73
Quantifying microbial diversity: morphotypes, 16S rRNA genes, and carotenoids of oxygenic phototrophs in microbial mats. Appl Environ Microbiol (1999) 4.71
Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria. Appl Environ Microbiol (1996) 4.59
Molecular diversity of soil and marine 16S rRNA gene sequences related to beta-subgroup ammonia-oxidizing bacteria. Appl Environ Microbiol (1996) 4.56
Evolutionary relationships among ammonia- and nitrite-oxidizing bacteria. J Bacteriol (1994) 4.43
Selective Recovery of 16S rRNA Sequences from Natural Microbial Communities in the Form of cDNA. Appl Environ Microbiol (1989) 4.37
Flow cytometry and cell sorting of heterogeneous microbial populations: the importance of single-cell analyses. Microbiol Rev (1996) 4.21
Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities. Appl Environ Microbiol (2002) 4.14
Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases. Proc Natl Acad Sci U S A (2009) 4.03
Culture-independent identification of microorganisms that respond to specified stimuli. Appl Environ Microbiol (1999) 4.03
Phylogenetic analysis of dissimilatory Fe(III)-reducing bacteria. J Bacteriol (1996) 3.89
Distribution of sulfate-reducing bacteria, O2, and H2S in photosynthetic biofilms determined by oligonucleotide probes and microelectrodes. Appl Environ Microbiol (1993) 3.89
Use of oligodeoxynucleotide signature probes for identification of physiological groups of methylotrophic bacteria. Appl Environ Microbiol (1990) 3.79
A computer-simulated restriction fragment length polymorphism analysis of bacterial small-subunit rRNA genes: efficacy of selected tetrameric restriction enzymes for studies of microbial diversity in nature. Appl Environ Microbiol (1996) 3.53
Isolation and identification of methanogen-specific DNA from blanket bog peat by PCR amplification and sequence analysis. Appl Environ Microbiol (1996) 3.47
Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru. Proc Natl Acad Sci U S A (2006) 3.46
Quantification of bacterial groups within human fecal flora by oligonucleotide probe hybridization. Appl Environ Microbiol (2000) 3.36
In situ identification of bacteria in drinking water and adjoining biofilms by hybridization with 16S and 23S rRNA-directed fluorescent oligonucleotide probes. Appl Environ Microbiol (1993) 3.31
A phylogenetic tree of 16S rRNA sequences from sulfate-reducing bacteria in a sandy marine sediment. Appl Environ Microbiol (1994) 3.29
Crenarchaeota in Lake Michigan sediment. Appl Environ Microbiol (1997) 2.99
Application of rRNA-based probes for observing marine nanoplanktonic protists. Appl Environ Microbiol (1993) 2.99
Diet-dependent shifts in the bacterial population of the rumen revealed with real-time PCR. Appl Environ Microbiol (2001) 2.98
Direct extraction and purification of rRNA for ecological studies. Appl Environ Microbiol (1993) 2.97
16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the Green Non-Sulfur bacteria. Proc Natl Acad Sci U S A (1996) 2.86
Oligonucleotide microchips as genosensors for determinative and environmental studies in microbiology. Appl Environ Microbiol (1997) 2.83
In situ gene expression in mixed-culture biofilms: evidence of metabolic interactions between community members. Appl Environ Microbiol (1998) 2.82
Rapid quantitative profiling of complex microbial populations. Nucleic Acids Res (2006) 2.75
Taxon-specific probes for the cellulolytic genus Fibrobacter reveal abundant and novel equine-associated populations. Appl Environ Microbiol (1995) 2.74
Seasonal community and population dynamics of pelagic bacteria and archaea in a high mountain lake Appl Environ Microbiol (1998) 2.71
Enzyme immunoassay for identification of Vibrio vulnificus in seawater, sediment, and oysters. Appl Environ Microbiol (1991) 2.61
Community structure of a microbial mat: the phylogenetic dimension. Proc Natl Acad Sci U S A (1994) 2.57
Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes. Appl Environ Microbiol (1999) 2.55
Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site. Proc Natl Acad Sci U S A (1995) 2.51
Distribution of cultivated and uncultivated cyanobacteria and Chloroflexus-like bacteria in hot spring microbial mats. Appl Environ Microbiol (1994) 2.51
Rapid method for direct extraction of mRNA from seeded soils. Appl Environ Microbiol (1991) 2.46
Identification of mesophilic lactic acid bacteria by using polymerase chain reaction-amplified variable regions of 16S rRNA and specific DNA probes. Appl Environ Microbiol (1991) 2.44
Comparative analysis of nitrifying bacteria associated with freshwater and marine aquaria. Appl Environ Microbiol (1996) 2.34
Transovarial inheritance of endosymbiotic bacteria in clams inhabiting deep-sea hydrothermal vents and cold seeps. Proc Natl Acad Sci U S A (1993) 2.29
The Structure of Microbial Communities in Soil and the Lasting Impact of Cultivation. Microb Ecol (2001) 2.27
Flexible community structure correlates with stable community function in methanogenic bioreactor communities perturbed by glucose. Appl Environ Microbiol (2000) 2.24
Competition and coexistence of sulfate-reducing and methanogenic populations in anaerobic biofilms. Appl Environ Microbiol (1996) 2.13
Detection and localization of syntrophic propionate-oxidizing bacteria in granular sludge by in situ hybridization using 16S rRNA-based oligonucleotide probes. Appl Environ Microbiol (1996) 2.13
Molecular analysis of the microbial diversity present in the colonic wall, colonic lumen, and cecal lumen of a pig. Appl Environ Microbiol (1999) 2.04
Polyphasic study of the spatial distribution of microorganisms in Mexican pozol, a fermented maize dough, demonstrates the need for cultivation-independent methods to investigate traditional fermentations. Appl Environ Microbiol (1999) 1.97
Phylogenetic analysis of nonthermophilic members of the kingdom crenarchaeota and their diversity and abundance in soils Appl Environ Microbiol (1998) 1.96
Polynucleotide probes that target a hypervariable region of 16S rRNA genes to identify bacterial isolates corresponding to bands of community fingerprints. Appl Environ Microbiol (1999) 1.95
Spatial changes in the bacterial community structure along a vertical oxygen gradient in flooded paddy soil cores. Appl Environ Microbiol (2000) 1.91
Hybridization of DNA probes with whole-community genome for detection of genes that encode microbial responses to pollutants: mer genes and Hg2+ resistance. Appl Environ Microbiol (1989) 1.91
Characterization of Bacterial Communities from Activated Sludge: Culture-Dependent Numerical Identification Versus In Situ Identification Using Group- and Genus-Specific rRNA-Targeted Oligonucleotide Probes Microb Ecol (1996) 1.87
Bacterial growth on surfaces: automated image analysis for quantification of growth rate-related parameters. Appl Environ Microbiol (1995) 1.82
Culture-dependent and culture-independent characterization of microbial assemblages associated with high-temperature petroleum reservoirs. Appl Environ Microbiol (2000) 1.82
Seasonal changes in the relative abundance of uncultivated sulfate-reducing bacteria in a salt marsh sediment and in the rhizosphere of Spartina alterniflora. Appl Environ Microbiol (1997) 1.76
A simple method for quantification of uncultured microorganisms in the environment based on in vitro transcription of 16S rRNA. Appl Environ Microbiol (1997) 1.75
Unexpected population distribution in a microbial mat community: sulfate-reducing bacteria localized to the highly oxic chemocline in contrast to a eukaryotic preference for anoxia. Appl Environ Microbiol (1999) 1.75
Microbial community dynamics during production of the Mexican fermented maize dough pozol. Appl Environ Microbiol (2000) 1.73
Molecular ecological analysis of the succession and diversity of sulfate-reducing bacteria in the mouse gastrointestinal tract. Appl Environ Microbiol (2000) 1.71
Fecal bacterial diversity in a wild gorilla. Appl Environ Microbiol (2006) 1.70
Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine arctic sediments. Appl Environ Microbiol (2000) 1.68
Stable carbon isotope analysis of nucleic acids to trace sources of dissolved substrates used by estuarine bacteria. Appl Environ Microbiol (1990) 1.67
Quantitative molecular analysis of the microbial community in marine arctic sediments (Svalbard). Appl Environ Microbiol (2001) 1.62
Design and application of rRNA-targeted oligonucleotide probes for the dissimilatory iron- and manganese-reducing bacterium Shewanella putrefaciens. Appl Environ Microbiol (1993) 1.60
Characterization of the gill symbiont of Thyasira flexuosa (Thyasiridae: Bivalvia) by use of polymerase chain reaction and 16S rRNA sequence analysis. J Bacteriol (1992) 1.59
Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments. ISME J (2012) 1.51
The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function. Appl Environ Microbiol (2003) 1.50
Development of an oligonucleotide probe targeting 16S rRNA and its application for detection and quantitation of the ruminal bacterium Synergistes jonesii in a mixed-population chemostat. Appl Environ Microbiol (1993) 1.50
Single-base-pair discrimination of terminal mismatches by using oligonucleotide microarrays and neural network analyses. Appl Environ Microbiol (2002) 1.48
Spatial distribution and stability of the eight microbial species of the altered schaedler flora in the mouse gastrointestinal tract. Appl Environ Microbiol (2004) 1.45
Estimation of the relative abundance of different Bacteroides and Prevotella ribotypes in gut samples by restriction enzyme profiling of PCR-amplified 16S rRNA gene sequences. Appl Environ Microbiol (1998) 1.43
Group-specific small-subunit rRNA hybridization probes to characterize filamentous foaming in activated sludge systems. Appl Environ Microbiol (1997) 1.43
The use of 16S rRNA-targeted oligonucleotide probes to study competition between ruminal fibrolytic bacteria: development of probes for Ruminococcus species and evidence for bacteriocin production. Appl Environ Microbiol (1994) 1.41
Rapid Extraction of DNA and rRNA from Sediments by a Novel Hydroxyapatite Spin-Column Method. Appl Environ Microbiol (1996) 1.39
Bacterial populations colonizing and degrading rice straw in anoxic paddy soil. Appl Environ Microbiol (2001) 1.38
Detection of Clostridium proteoclasticum and closely related strains in the rumen by competitive PCR. Appl Environ Microbiol (1998) 1.37
Novel major bacterial candidate division within a municipal anaerobic sludge digester. Appl Environ Microbiol (2005) 1.36
An anaerobic methane-oxidizing community of ANME-1b archaea in hypersaline Gulf of Mexico sediments. Appl Environ Microbiol (2006) 1.36
Molecular phylogenetic and biogeochemical studies of sulfate-reducing bacteria in the rhizosphere of spartina alterniflora Appl Environ Microbiol (1999) 1.36
Potential interactions of particle-associated anammox bacteria with bacterial and archaeal partners in the Namibian upwelling system. Appl Environ Microbiol (2007) 1.36
Population structure of microbial communities associated with two deep, anaerobic, alkaline aquifers. Appl Environ Microbiol (1997) 1.33
Phylogenetic affiliation and quantification of psychrophilic sulfate-reducing isolates in marine Arctic sediments. Appl Environ Microbiol (1999) 1.33
Use of real-time PCR technique in studying rumen cellulolytic bacteria population as affected by level of roughage in swamp buffalo. Curr Microbiol (2008) 1.32
Bacterial evolution. Microbiol Rev (1987) 85.63
The phylogeny of prokaryotes. Science (1980) 24.57
Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids. Microbiol Rev (1983) 23.08
Hybridization of synthetic oligodeoxyribonucleotides to phi chi 174 DNA: the effect of single base pair mismatch. Nucleic Acids Res (1979) 14.12
A phylogenetic definition of the major eubacterial taxa. Syst Appl Microbiol (1985) 11.82
The use of synthetic oligonucleotides as hybridization probes. II. Hybridization of oligonucleotides of mixed sequence to rabbit beta-globin DNA. Nucleic Acids Res (1981) 9.56
Characterization of a Yellowstone hot spring microbial community by 5S rRNA sequences. Appl Environ Microbiol (1985) 6.06
Characterization of rat cecum cellulolytic bacteria. Appl Environ Microbiol (1982) 3.65
Cellulolytic and non-cellulolytic bacteria in rat gastrointestinal tracts. Appl Environ Microbiol (1982) 3.59
Effect of monensin and lasalocid-sodium on the growth of methanogenic and rumen saccharolytic bacteria. Appl Environ Microbiol (1979) 3.49
Ionophores: their effect on production efficiency and mode of action. J Anim Sci (1984) 2.84
Effects of lasalocid or monensin on lactate-producing or -using rumen bacteria. J Anim Sci (1981) 2.76
Effects of diet, time after feeding, and position sampled on numbers of viable bacteria in the bovine rumen. J Dairy Sci (1968) 2.74
Microbial ecology and activities in the rumen: part 1. Crit Rev Microbiol (1982) 2.06
Microbial ecology and activities in the rumen: Part II. Crit Rev Microbiol (1982) 1.98
California field test goes forward. Science (1987) 1.91
Effect of monensin on breakdown of protein by ruminal microorganisms in vitro. J Anim Sci (1981) 1.84
The division between fast- and slow-growing species corresponds to natural relationships among the mycobacteria. J Bacteriol (1990) 5.60
Sentinel lymph node biopsy: is it indicated in patients with high-risk ductal carcinoma-in-situ and ductal carcinoma-in-situ with microinvasion? Ann Surg Oncol (2000) 3.75
Characterization of rat cecum cellulolytic bacteria. Appl Environ Microbiol (1982) 3.65
Cellulolytic and non-cellulolytic bacteria in rat gastrointestinal tracts. Appl Environ Microbiol (1982) 3.59
The phylogeny of marine and freshwater caulobacters reflects their habitat. J Bacteriol (1992) 1.36
Quantification of thymic function by measuring T cell receptor excision circles within peripheral blood and lymphoid tissues in monkeys. Eur J Immunol (2000) 1.35
Enumeration and isolation of cellulolytic and hemicellulolytic bacteria from human feces. Appl Environ Microbiol (1988) 1.11
Endoscopic sinonasal surgery in the management of primary headaches. Rhinology (1997) 0.93
Primary malignant melanoma of the sinonasal cavity: MR imaging evaluation. Radiographics (1996) 0.87
Effects of alkaline hydrogen peroxide treatment on in vitro degradation of cellulosic substrates by mixed ruminal microorganisms and Bacteroides succinogenes S85. Appl Environ Microbiol (1988) 0.85
Study of quadrant high-dose intraoperative radiation therapy for early-stage breast cancer. Br J Surg (2008) 0.84
Survey and workshop initiative on community nurses' knowledge of the Internet. Comput Nurs (2001) 0.81
Use of a simple pain model to evaluate analgesic activity of ibuprofen versus paracetamol. East Afr Med J (2000) 0.81
High-technology palliative radiotherapy using image-guided intensity-modulated radiotherapy. Clin Oncol (R Coll Radiol) (2008) 0.80
Neonatal outcome after active perinatal management of the very premature infant between 23 and 27 weeks' gestation. J Perinatol (1998) 0.80
Natural history of fetuses with cleft lip. Plast Reconstr Surg (1999) 0.80
Mechanisms of synergism between arteriolar embolization and hyperthermia in a rabbit V-2 model of solitary hepatic metastasis. Cancer Res (1986) 0.77
Identification of cocarcinogens and their potential mechanisms of action using C3H10T 1/2 CL8 mouse embryo fibroblasts. Cancer Res (1981) 0.77
The emerging role of IG-IMRT for palliative radiotherapy: a single-institution experience. Curr Oncol (2009) 0.77
The use of transgenesis to investigate signal-transduction pathways. Biochem Soc Trans (1994) 0.76
Bone marrow debacle. Imprint (1990) 0.75
Effects of extruded soybeans and forage source on fermentation by rumen microorganisms in continuous culture. J Dairy Sci (1994) 0.75
The Colorado differentiated practice model. Nurs Manage (1994) 0.75
Effects of feed intake and dietary urea concentration on ruminal dilution rate and efficiency of bacterial growth in steers. J Dairy Sci (1987) 0.75
Relationship of N-arylacetamide metabolism and macromolecular binding to oncogenic transformation of C3H10T1/2CL8 cells. Cancer Lett (1982) 0.75
A comparison of three liquid-ventilation cooling garments during treadmill exercise. Aviat Space Environ Med (1981) 0.75
Characterization ofPseudomonas geomorphus: A novel groundwater bacterium. Microb Ecol (1989) 0.75
B7.1 costimulation increases T-cell proliferation and cytotoxicity via selective expansion of specific variable alpha and beta genes of the T-cell receptor. Surgery (2000) 0.75
Carcinogen metabolism in rat liver cell culture. Ann N Y Acad Sci (1980) 0.75
Actinomycosis documented by cervicovaginal smear and endometrial biopsy: implications for patient management. Acta Cytol (1988) 0.75
Cost-effective practice as a focus for nursing grand rounds. Oncol Nurs Forum (1991) 0.75
Seismic stress responses of soybean to different photosynthetic photon flux. Ann Bot (1990) 0.75