Published in Nucleic Acids Res on December 11, 1993
Molecular signals of epigenetic states. Science (2010) 4.81
The GAA*TTC triplet repeat expanded in Friedreich's ataxia impedes transcription elongation by T7 RNA polymerase in a length and supercoil dependent manner. Nucleic Acids Res (2000) 2.14
Circular RNA oligonucleotides. Synthesis, nucleic acid binding properties, and a comparison with circular DNAs. Nucleic Acids Res (1994) 1.81
High throughput measurement of duplex, triplex and quadruplex melting curves using molecular beacons and a LightCycler. Nucleic Acids Res (2002) 1.56
Stable triple helices formed by oligonucleotide N3'-->P5' phosphoramidates inhibit transcription elongation. Proc Natl Acad Sci U S A (1996) 1.46
Recognition of Single-Stranded Nucleic Acids by Triplex Formation: The Binding of Pyrimidine-Rich Sequences. J Am Chem Soc (1994) 1.24
Potential in vivo roles of nucleic acid triple-helices. RNA Biol (2011) 1.20
Exclusion of RNA strands from a purine motif triple helix. Nucleic Acids Res (1994) 1.19
Effect of competing self-structure on triplex formation with purine-rich oligodeoxynucleotides containing GA repeats. Nucleic Acids Res (1995) 1.14
Triplexator: detecting nucleic acid triple helices in genomic and transcriptomic data. Genome Res (2012) 1.12
Relative stabilities of triple helices composed of combinations of DNA, RNA and 2'-O-methyl-RNA backbones: chimeric circular oligonucleotides as probes. Nucleic Acids Res (1995) 1.11
Prediction of the stability of DNA triplexes. Proc Natl Acad Sci U S A (1996) 1.09
Recognition of DNA, RNA, and Proteins by Circular Oligonucleotides. Acc Chem Res (1998) 1.04
Short peptide nucleic acids bind strongly to homopurine tract of double helical RNA at pH 5.5. J Am Chem Soc (2010) 1.04
Structural features and stability of an RNA triple helix in solution. Nucleic Acids Res (1996) 1.01
Suppression of insulin-like growth factor type I receptor by a triple-helix strategy inhibits IGF-I transcription and tumorigenic potential of rat C6 glioblastoma cells. Proc Natl Acad Sci U S A (1997) 1.00
Triple helical recognition of pyrimidine inversions in polypurine tracts of RNA by nucleobase-modified PNA. Chem Commun (Camb) (2011) 0.94
Formation of stable triplexes between purine RNA and pyrimidine oligodeoxyxylonucleotides. Nucleic Acids Res (2003) 0.93
Targeting of an interrupted polypurine:polypyrimidine sequence in mammalian cells by a triplex-forming oligonucleotide containing a novel base analogue. Biochemistry (2010) 0.92
Spectroscopic studies of chimeric DNA-RNA and RNA 29-base intramolecular triple helices. Nucleic Acids Res (1995) 0.90
Ligand-induced formation of nucleic acid triple helices. Proc Natl Acad Sci U S A (1994) 0.90
Recognition of double-stranded RNA by guanidine-modified peptide nucleic acids. Biochemistry (2011) 0.90
Triple helix formation with purine-rich phosphorothioate-containing oligonucleotides covalently linked to an acridine derivative. Nucleic Acids Res (1997) 0.87
6-Oxocytidine a novel protonated C-base analogue for stable triple helix formation. Nucleic Acids Res (1995) 0.86
Stabilities of intrastrand pyrimidine motif DNA and RNA triple helices. Nucleic Acids Res (2000) 0.85
Recognition of duplex DNA by RNA polynucleotides. Nucleic Acids Res (1995) 0.85
Different conformational families of pyrimidine.purine.pyrimidine triple helices depending on backbone composition. Nucleic Acids Res (1994) 0.84
Input-dependent induction of oligonucleotide structural motifs for performing molecular logic. J Am Chem Soc (2012) 0.83
Single strand targeted triplex-formation. Destabilization of guanine quadruplex structures by foldback triplex-forming oligonucleotides. Nucleic Acids Res (1995) 0.83
Triplex formation with alpha anomers of purine-rich and pyrimidine-rich oligodeoxynucleotides. Nucleic Acids Res (1995) 0.82
PNA containing isocytidine nucleobase: synthesis and recognition of double helical RNA. Bioorg Med Chem Lett (2011) 0.81
Optimal design of parallel triplex forming oligonucleotides containing Twisted Intercalating Nucleic Acids--TINA. Nucleic Acids Res (2010) 0.81
Triple helices containing arabinonucleotides in the third (Hoogsteen) strand: effects of inverted stereochemistry at the 2'-position of the sugar moiety. Nucleic Acids Res (1998) 0.81
Recognition of RNA duplexes by chemically modified triplex-forming oligonucleotides. Nucleic Acids Res (2013) 0.80
Unusual thermal stability of RNA/[RP-PS]-DNA/RNA triplexes containing a homopurine DNA strand. Biophys J (2007) 0.77
In vitro selection of oligonucleotides that bind double-stranded DNA in the presence of triplex-stabilizing agents. Nucleic Acids Res (2009) 0.77
Triple helix-interacting proteins and cancer. OA Mol Oncol (2013) 0.76
The lncRNA HOTAIR impacts on mesenchymal stem cells via triple helix formation. Nucleic Acids Res (2016) 0.76
Biophysical characterization of the strong stabilization of the RNA triplex poly(U)•poly(A)*poly(U) by 9-O-(ω-amino) alkyl ether berberine analogs. PLoS One (2012) 0.76
The Effect of Small Cosolutes that Mimic Molecular Crowding Conditions on the Stability of Triplexes Involving Duplex DNA. Int J Mol Sci (2016) 0.75
Structural determinants of photoreactivity of triplex forming oligonucleotides conjugated to psoralens. J Nucleic Acids (2010) 0.75
PARTICLE triplexes cluster in the tumor suppressor WWOX and may extend throughout the human genome. Sci Rep (2017) 0.75
Sequence-specific cleavage of double helical DNA by triple helix formation. Science (1987) 9.20
Oligonucleotide interactions. 3. Circular dichroism studies of the conformation of deoxyoligonucleotides. Biopolymers (1970) 6.03
Physical and chemical characterization of two- and three-stranded adenine-thymine and adenine-uracil homopolymer complexes. J Mol Biol (1966) 5.83
Second structural motif for recognition of DNA by oligonucleotide-directed triple-helix formation. Science (1991) 5.40
Structures for the polynucleotide complexes poly(dA) with poly (dT) and poly(dT) with poly(dA) with poly (dT). J Mol Biol (1974) 5.14
Sequence-specific recognition, photocrosslinking and cleavage of the DNA double helix by an oligo-[alpha]-thymidylate covalently linked to an azidoproflavine derivative. Nucleic Acids Res (1987) 4.36
Synthesis of DNA via deoxynucleoside H-phosphonate intermediates. Nucleic Acids Res (1986) 4.24
Inhibition of DNA binding proteins by oligonucleotide-directed triple helix formation. Science (1989) 3.88
Stability and properties of double and triple helices: dramatic effects of RNA or DNA backbone composition. Science (1992) 3.53
Specificity of the three-stranded complex formation between double-stranded DNA and single-stranded RNA containing repeating nucleotide sequences. J Mol Biol (1968) 3.53
Evidence that a triplex-forming oligodeoxyribonucleotide binds to the c-myc promoter in HeLa cells, thereby reducing c-myc mRNA levels. Proc Natl Acad Sci U S A (1991) 3.14
Binding of triple helix forming oligonucleotides to sites in gene promoters. Biochemistry (1991) 2.73
Studies on the t-butyldimethylsilyl group as 2'-O-protection in oligoribonucleotide synthesis via the H-phosphonate approach. Nucleic Acids Res (1988) 2.69
Specific inhibition of transcription by triple helix-forming oligonucleotides. Proc Natl Acad Sci U S A (1992) 2.38
Sequence-specific intercalating agents: intercalation at specific sequences on duplex DNA via major groove recognition by oligonucleotide-intercalator conjugates. Proc Natl Acad Sci U S A (1989) 2.38
Kinetics and thermodynamics of triple-helix formation: effects of ionic strength and mismatches. Biochemistry (1992) 2.29
Triple helix formation inhibits transcription elongation in vitro. Proc Natl Acad Sci U S A (1991) 2.28
Sequence-specific recognition of double helical RNA and RNA.DNA by triple helix formation. Proc Natl Acad Sci U S A (1993) 2.07
A triple helix-forming oligonucleotide-intercalator conjugate acts as a transcriptional repressor via inhibition of NF kappa B binding to interleukin-2 receptor alpha-regulatory sequence. J Biol Chem (1992) 2.00
A stable complex between homopyrimidine oligomers and the homologous regions of duplex DNAs. Nucleic Acids Res (1988) 1.96
Conformational influence of the ribose 2'-hydroxyl group: crystal structures of DNA-RNA chimeric duplexes. Biochemistry (1993) 1.91
Structure, stability, and thermodynamics of a short intermolecular purine-purine-pyrimidine triple helix. Biochemistry (1991) 1.83
The anti-gene strategy: control of gene expression by triplex-forming-oligonucleotides. Anticancer Drug Des (1991) 1.81
Triple-helix formation by alpha oligodeoxynucleotides and alpha oligodeoxynucleotide-intercalator conjugates. Proc Natl Acad Sci U S A (1991) 1.63
Proton nuclear magnetic resonance assignments and structural characterization of an intramolecular DNA triplex. J Mol Biol (1992) 1.41
Extension of the range of recognition sequences for triple helix formation by oligonucleotides containing guanines and thymines. C R Acad Sci III (1991) 1.30
Stable triple helices are formed upon binding of RNA oligonucleotides and their 2'-O-methyl derivatives to double-helical DNA. C R Acad Sci III (1992) 1.18
Inhibition of T7 RNA polymerase initiation by triple-helical DNA complexes: a model for artificial gene repression. Biochemistry (1992) 1.17
Oligo(2'-O-methyl)ribonucleotides. Effective probes for duplex DNA. FEBS Lett (1992) 1.16
Repression of bacteriophage promoters by DNA and RNA oligonucleotides. Nucleic Acids Res (1993) 1.07
A possible family of B-like triple helix structures: comparison with the Arnott A-like triple helix. Biochemistry (1993) 1.02
Sequence-selective recognition and cleavage of double-helical DNA. Curr Opin Biotechnol (1993) 1.01
Structure of d(T)n.d(A)n.d(T)n: the DNA triple helix has B-form geometry with C2'-endo sugar pucker. Biochemistry (1992) 0.99
Triple helical polynucleotidic structures: sugar conformations determined by FTIR spectroscopy. J Biomol Struct Dyn (1991) 0.97
A computational and experimental study of the bending induced at a double-triple helix junction. Biophys Chem (1992) 0.93
Triple helical polynucleotidic structures: an FTIR study of the C+ .G. Ctriplet. J Biomol Struct Dyn (1992) 0.93
Inhibition of interleukin-2 receptor alpha-subunit gene expression by oligonucleotide-directed triple helix formation. C R Acad Sci III (1993) 0.93
Stromal gene signatures in large-B-cell lymphomas. N Engl J Med (2008) 11.34
Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res (1993) 9.16
Compilation of tRNA sequences. Nucleic Acids Res (1985) 4.95
Sequence-specific recognition, photocrosslinking and cleavage of the DNA double helix by an oligo-[alpha]-thymidylate covalently linked to an azidoproflavine derivative. Nucleic Acids Res (1987) 4.36
Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res (1987) 4.05
Compilation of tRNA sequences. Nucleic Acids Res (1979) 3.34
The involvement of 5S RNA in the binding of tRNA to ribosomes. Biochem Biophys Res Commun (1973) 3.27
Crystal structure of active elongation factor Tu reveals major domain rearrangements. Nature (1993) 3.26
Compilation of tRNA sequences. Nucleic Acids Res (1983) 3.03
Nucleic acid-binding molecules with high affinity and base sequence specificity: intercalating agents covalently linked to oligodeoxynucleotides. Proc Natl Acad Sci U S A (1984) 3.03
Sequence-specific binding and photocrosslinking of alpha and beta oligodeoxynucleotides to the major groove of DNA via triple-helix formation. Proc Natl Acad Sci U S A (1988) 2.82
Compilation of tRNA sequences. Nucleic Acids Res (1982) 2.56
Lac repressor binding to poly (d(A-T)). Conformational changes. Biochem Biophys Res Commun (1974) 2.49
Compilation of tRNA sequences. Nucleic Acids Res (1981) 2.45
Enzymatic amplification of translation inhibition of rabbit beta-globin mRNA mediated by anti-messenger oligodeoxynucleotides covalently linked to intercalating agents. Nucleic Acids Res (1987) 2.41
Sequence-specific photo-induced cross-linking of the two strands of double-helical DNA by a psoralen covalently linked to a triple helix-forming oligonucleotide. Proc Natl Acad Sci U S A (1991) 2.40
Specific inhibition of transcription by triple helix-forming oligonucleotides. Proc Natl Acad Sci U S A (1992) 2.38
G-quadruplex DNA: a target for drug design. Nat Med (1998) 2.38
Sequence-specific intercalating agents: intercalation at specific sequences on duplex DNA via major groove recognition by oligonucleotide-intercalator conjugates. Proc Natl Acad Sci U S A (1989) 2.38
Kinetics and thermodynamics of triple-helix formation: effects of ionic strength and mismatches. Biochemistry (1992) 2.29
Compilation of tRNA sequences. Nucleic Acids Res (1980) 2.22
Interactions between functional groups in protein-nucleic acid associations. Prog Biophys Mol Biol (1982) 2.14
Specific inhibition of mRNA translation by complementary oligonucleotides covalently linked to intercalating agents. Proc Natl Acad Sci U S A (1986) 2.14
Rate of degradation of [alpha]- and [beta]-oligodeoxynucleotides in Xenopus oocytes. Implications for anti-messenger strategies. Nucleic Acids Res (1987) 2.10
Cryobiopsy increases the diagnostic yield of endobronchial biopsy: a multicentre trial. Eur Respir J (2011) 2.09
Compilation of tRNA sequences. Nucleic Acids Res (1984) 2.08
Distinctive patterns of BCL6 molecular alterations and their functional consequences in different subgroups of diffuse large B-cell lymphoma. Leukemia (2007) 2.03
A triple helix-forming oligonucleotide-intercalator conjugate acts as a transcriptional repressor via inhibition of NF kappa B binding to interleukin-2 receptor alpha-regulatory sequence. J Biol Chem (1992) 2.00
Comparative inhibition of rabbit globin mRNA translation by modified antisense oligodeoxynucleotides. Nucleic Acids Res (1989) 1.98
Oligodeoxynucleotides covalently linked to intercalating dyes as base sequence-specific ligands. Influence of dye attachment site. EMBO J (1984) 1.97
Sequence-specific recognition and cleavage of duplex DNA via triple-helix formation by oligonucleotides covalently linked to a phenanthroline-copper chelate. Proc Natl Acad Sci U S A (1989) 1.96
Native but not denatured recombinant human immunodeficiency virus type 1 gp120 generates broad-spectrum neutralizing antibodies in baboons. J Virol (1992) 1.94
Phosphoramidate oligonucleotides as potent antisense molecules in cells and in vivo. Nat Biotechnol (2001) 1.91
Oligodeoxynucleotides covalently linked to intercalating agents: a new class of gene regulatory substances. Biochimie (1986) 1.90
Posttranscriptionally modified nucleosides in transfer RNA: their locations and frequencies. Biochimie (1995) 1.90
Oligo(alpha-deoxynucleotide)s covalently linked to intercalating agents: differential binding to ribo- and deoxyribopolynucleotides and stability towards nuclease digestion. Proc Natl Acad Sci U S A (1987) 1.88
Sequence-specific recognition of the major groove of DNA by oligodeoxynucleotides via triple helix formation. Footprinting studies. Nucleic Acids Res (1988) 1.85
Sequence and identification of the nucleotide binding site for the elongation factor Tu from Thermus thermophilus HB8. Nucleic Acids Res (1987) 1.85
Sequence-specific artificial photo-induced endonucleases based on triple helix-forming oligonucleotides. Nature (1990) 1.84
Fluorescence energy transfer as a probe for nucleic acid structures and sequences. Nucleic Acids Res (1994) 1.83
Triple helix-specific ligands. Science (1992) 1.83
Selective inhibition of the cytopathic effect of type A influenza viruses by oligodeoxynucleotides covalently linked to an intercalating agent. Nucleic Acids Res (1987) 1.75
Cell-free synthesis of the mitochondrial ADP/ATP carrier protein of Neurospora crassa. Eur J Biochem (1979) 1.75
Cell senescence and telomere shortening induced by a new series of specific G-quadruplex DNA ligands. Proc Natl Acad Sci U S A (2002) 1.75
Sequence specificity in triple-helix formation: experimental and theoretical studies of the effect of mismatches on triplex stability. Biochemistry (1991) 1.73
Interactions of aromatic residues of proteins with nucleic acids. Fluorescence studies of the binding of oligopeptides containing tryptophan and tyrosine residues to polynucleotides. Biochemistry (1975) 1.66
Inhibition of gene expression by triple helix-directed DNA cross-linking at specific sites. Proc Natl Acad Sci U S A (1993) 1.65
Array-based DNA methylation profiling in follicular lymphoma. Leukemia (2009) 1.63
Cationic microparticles: A potent delivery system for DNA vaccines. Proc Natl Acad Sci U S A (2000) 1.63
Triple-helix formation by alpha oligodeoxynucleotides and alpha oligodeoxynucleotide-intercalator conjugates. Proc Natl Acad Sci U S A (1991) 1.63
TRK-fused gene (TFG) is a new partner of ALK in anaplastic large cell lymphoma producing two structurally different TFG-ALK translocations. Blood (1999) 1.59
[New substances with high specific activity for nucleic acid sequences: oligodeoxynucleotides covalently linked to an intercalating agent]. C R Seances Acad Sci III (1983) 1.59
Inhibition of restriction endonuclease cleavage via triple helix formation by homopyrimidine oligonucleotides. Biochemistry (1989) 1.59
Role of ribothymidine in the thermal stability of transfer RNA as monitored by proton magnetic resonance. Nucleic Acids Res (1979) 1.59
Triple-helix formation by oligonucleotides containing the three bases thymine, cytosine, and guanine. Proc Natl Acad Sci U S A (1992) 1.57
The role of modified purine 64 in initiator/elongator discrimination of tRNA(iMet) from yeast and wheat germ. Nucleic Acids Res (1990) 1.55
Antimessenger oligodeoxyribonucleotides: an alternative to antisense RNA for artificial regulation of gene expression--a review. Gene (1988) 1.55
Oligonucleotide clamps arrest DNA synthesis on a single-stranded DNA target. Proc Natl Acad Sci U S A (1993) 1.54
Compilation of sequences of tRNA genes. Nucleic Acids Res (1983) 1.54
A tryptophan-containing peptide recognizes and cleaves DNA at apurinic sites. Nature (1981) 1.54
Recurrent genetic aberrations in thymoma and thymic carcinoma. Am J Pathol (2000) 1.53
Enzymatic incorporation of ATP and CTP analogues into the 3' end of tRNA. Eur J Biochem (1977) 1.52
The -C-C-A end of tRNA and its role in protein biosynthesis. Prog Nucleic Acid Res Mol Biol (1979) 1.51
Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution. RNA (1999) 1.50
Collection of published tRNA sequences. Nucleic Acids Res (1978) 1.49
Distribution of DNA vaccines determines their immunogenicity after intramuscular injection in mice. J Immunol (2000) 1.48
Regions of tRNA important for binding to the ribosomal A and P sites. Biochemistry (1976) 1.48
Telomerase inhibitors based on quadruplex ligands selected by a fluorescence assay. Proc Natl Acad Sci U S A (2001) 1.48
Specific recognition of GTpsiC loop (loop IV) of tRNA by 50S ribosomal subunits from E. coli. Nat New Biol (1973) 1.46
Stable triple helices formed by oligonucleotide N3'-->P5' phosphoramidates inhibit transcription elongation. Proc Natl Acad Sci U S A (1996) 1.46
Compilation of sequences of tRNA genes. Nucleic Acids Res (1985) 1.45
Triple helix formation and the antigene strategy for sequence-specific control of gene expression. Biochim Biophys Acta (1999) 1.44
An acridine-linked oligodeoxynucleotide targeted to the common 5' end of trypanosome mRNAs kills cultured parasites. Gene (1987) 1.43
Inhibition of simian virus 40 DNA replication in CV-1 cells by an oligodeoxynucleotide covalently linked to an intercalating agent. Nucleic Acids Res (1990) 1.42
Proton nuclear magnetic resonance of minor nucleosides in yeast phenylalanine transfer ribonucleic acid. Conformational changes as a consequence of aminoacylation, removal of the Y base, and codon--anticodon interaction. Biochemistry (1979) 1.42
Antideterminants present in minihelix(Sec) hinder its recognition by prokaryotic elongation factor Tu. EMBO J (1996) 1.40
Discrimination against misacylated tRNA by chloroplast elongation factor Tu. Eur J Biochem (1994) 1.39
Oligo-[alpha]-deoxynucleotides covalently linked to an intercalating agent. Double helices with parallel strands are formed with complementary oligo-[beta]-deoxynucleotides. Nucleic Acids Res (1987) 1.37
The selenocysteine-inserting opal suppressor serine tRNA from E. coli is highly unusual in structure and modification. Nucleic Acids Res (1989) 1.36
Anti-messenger oligodeoxynucleotides: specific inhibition of rabbit beta-globin synthesis in wheat germ extracts and Xenopus oocytes. Biochimie (1986) 1.36
Lymphomas expressing ALK fusion protein(s) other than NPM-ALK. Blood (1999) 1.35
The 3'-terminal end (NCCA) of tRNA determines the structure and stability of the aminoacyl acceptor stem. Proc Natl Acad Sci U S A (1993) 1.35
Compilation of sequences of tRNA genes. Nucleic Acids Res (1982) 1.34
Purification of aminoacyl-tRNA by affinity chromatography on immobilized Thermus thermophilus EF-Tu.GTP. Anal Biochem (1995) 1.34
Site of aminoacylation of tRNAs from Escherichia coli with respect to the 2'- or 3'-hydroxyl group of the terminal adenosine. Proc Natl Acad Sci U S A (1975) 1.31
Extension of the range of recognition sequences for triple helix formation by oligonucleotides containing guanines and thymines. C R Acad Sci III (1991) 1.30