The Ty1-copia group retrotransposons in Vicia species: copy number, sequence heterogeneity and chromosomal localisation.

PubWeight™: 1.59‹?› | Rank: Top 4%

🔗 View Article (PMID 8602145)

Published in Mol Gen Genet on February 25, 1996

Authors

S R Pearce1, G Harrison, D Li, J Heslop-Harrison, A Kumar, A J Flavell

Author Affiliations

1: Department of Biochemistry, University of Dundee, Dundee, UK.

Articles citing this

Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome. Genome Res (2001) 4.17

Do Plants Have a One-Way Ticket to Genomic Obesity? Plant Cell (1997) 3.86

Retrotransposon BARE-1 and Its Role in Genome Evolution in the Genus Hordeum. Plant Cell (1999) 3.30

Silencing of retrotransposons in arabidopsis and reactivation by the ddm1 mutation. Plant Cell (2000) 2.50

Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes. Plant Cell (2000) 1.70

Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes. Proc Natl Acad Sci U S A (2001) 1.51

Analysis of plant diversity with retrotransposon-based molecular markers. Heredity (Edinb) (2010) 1.24

MYB-related transcription factor NtMYB2 induced by wounding and elicitors is a regulator of the tobacco retrotransposon Tto1 and defense-related genes. Plant Cell (2000) 1.24

The distribution and copy number of copia-like retrotransposons in rice (Oryza sativa L.) and their implications in the organization and evolution of the rice genome. Proc Natl Acad Sci U S A (1999) 1.20

SIRE-1, a copia/Ty1-like retroelement from soybean, encodes a retroviral envelope-like protein. Proc Natl Acad Sci U S A (1998) 1.20

Significant expansion of Vicia pannonica genome size mediated by amplification of a single type of giant retroelement. Genetics (2006) 1.14

Construction of a comparative genetic map in faba bean (Vicia faba L.); conservation of genome structure with Lens culinaris. BMC Genomics (2008) 1.11

High-resolution physical mapping in Pennisetum squamulatum reveals extensive chromosomal heteromorphism of the genomic region associated with apomixis. Plant Physiol (2004) 1.10

FISH mapping and molecular organization of the major repetitive sequences of tomato. Chromosome Res (2008) 1.09

Distribution of retroelements in centromeres and neocentromeres of maize. Genetics (2003) 1.07

Targeted identification of short interspersed nuclear element families shows their widespread existence and extreme heterogeneity in plant genomes. Plant Cell (2011) 1.04

Molecular-cytogenetic characterization of the Vicia faba genome--heterochromatin differentiation, replication patterns and sequence localization. Chromosome Res (1998) 1.03

Proliferation of Ty3/gypsy-like retrotransposons in hybrid sunflower taxa inferred from phylogenetic data. BMC Biol (2009) 1.02

Retand: a novel family of gypsy-like retrotransposons harboring an amplified tandem repeat. Mol Genet Genomics (2006) 1.01

Sequence evolution and copy number of Ty1-copia retrotransposons in diverse plant genomes. Proc Natl Acad Sci U S A (2001) 1.00

Retrotransposon-based molecular markers for linkage and genetic diversity analysis in wheat. Mol Genet Genomics (2003) 0.99

Isolation, characterization and chromosome localization of repetitive DNA sequences in bananas (Musa spp.). Chromosome Res (2002) 0.97

Retrotransposon populations of Vicia species with varying genome size. Mol Genet Genomics (2005) 0.97

Repetitive sequences in plant nuclear DNA: types, distribution, evolution and function. Genomics Proteomics Bioinformatics (2014) 0.97

Isolation and characterization of genomic retrotransposon sequences from octoploid strawberry (Fragaria x ananassa Duch.). Plant Cell Rep (2007) 0.96

Terminal heterochromatin and alternative telomeric sequences in Allium cepa. Chromosome Res (1998) 0.93

Ty1-copia-retrotransposon behavior in a polyploid cotton. Chromosome Res (2000) 0.93

Pankinetoplast DNA structure in a primitive bodonid flagellate, Cryptobia helicis. EMBO J (1998) 0.92

CIRE1, a novel transcriptionally active Ty1-copia retrotransposon from Citrus sinensis. Mol Genet Genomics (2007) 0.91

Karyotype analysis of four Vicia species using in situ hybridization with repetitive sequences. Ann Bot (2003) 0.90

FIDEL-a retrovirus-like retrotransposon and its distinct evolutionary histories in the A- and B-genome components of cultivated peanut. Chromosome Res (2010) 0.86

The Ty1-copia families SALIRE and Cotzilla populating the Beta vulgaris genome show remarkable differences in abundance, chromosomal distribution, and age. Chromosome Res (2009) 0.84

Reverse transcriptase domain sequences from Mungbean (Vigna radiata) LTR retrotransposons: sequence characterization and phylogenetic analysis. Plant Cell Rep (2006) 0.80

Chromosomal organizations of major repeat families on potato (Solanum tuberosum) and further exploring in its sequenced genome. Mol Genet Genomics (2014) 0.79

Chromosomal distribution and evolution of abundant retrotransposons in plants: gypsy elements in diploid and polyploid Brachiaria forage grasses. Chromosome Res (2015) 0.78

Structural characterization of copia-type retrotransposons leads to insights into the marker development in a biofuel crop, Jatropha curcas L. Biotechnol Biofuels (2013) 0.77

Characterization, Genomic Organization, Abundance, and Chromosomal Distribution of Ty1-copia Retrotransposons in Erianthus arundinaceus. Front Plant Sci (2017) 0.75

Inbreeding, outbreeding and RAPD markers studies of faba bean (Vicia faba L.) crop. J Adv Res (2014) 0.75

Reverse transcriptase domain sequences from tree peony (Paeonia suffruticosa) long terminal repeat retrotransposons: sequence characterization and phylogenetic analysis. Biotechnol Biotechnol Equip (2014) 0.75

FaRE1: a transcriptionally active Ty1-copia retrotransposon in strawberry. J Plant Res (2009) 0.75

Comparative genomic in situ hybridization (cGISH) analysis on plant chromosomes revealed by labelled Arabidopsis DNA. Chromosome Res (2001) 0.75

Identification of parental genomes and genomic organization in Aster microcephalus var. ovatus. J Plant Res (2007) 0.75

Articles by these authors

The importance of diagnostic cytogenetics on outcome in AML: analysis of 1,612 patients entered into the MRC AML 10 trial. The Medical Research Council Adult and Children's Leukaemia Working Parties. Blood (1998) 11.58

Large-scale analysis of the yeast genome by transposon tagging and gene disruption. Nature (1999) 9.87

Deficient signaling in mice devoid of double-stranded RNA-dependent protein kinase. EMBO J (1995) 6.94

A two-dimensional nuclear Overhauser enhancement (2D NOE) experiment for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules. Biochem Biophys Res Commun (1980) 6.64

ErbB2, but not ErbB1, reinitiates proliferation and induces luminal repopulation in epithelial acini. Nat Cell Biol (2001) 6.21

Engineering cell shape and function. Science (1994) 5.95

Structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddCTP. Science (1994) 5.57

Evaluation of pollen viability by enzymatically induced fluorescence; intracellular hydrolysis of fluorescein diacetate. Stain Technol (1970) 5.43

The presence of a FLT3 internal tandem duplication in patients with acute myeloid leukemia (AML) adds important prognostic information to cytogenetic risk group and response to the first cycle of chemotherapy: analysis of 854 patients from the United Kingdom Medical Research Council AML 10 and 12 trials. Blood (2001) 5.34

The predictive value of hierarchical cytogenetic classification in older adults with acute myeloid leukemia (AML): analysis of 1065 patients entered into the United Kingdom Medical Research Council AML11 trial. Blood (2001) 5.20

Exclusion of elderly people from clinical research: a descriptive study of published reports. BMJ (1997) 4.95

Chemoprevention of gastric dysplasia: randomized trial of antioxidant supplements and anti-helicobacter pylori therapy. J Natl Cancer Inst (2000) 4.51

Assessing effectiveness of treatment of depression in primary care. Partially randomised preference trial. Br J Psychiatry (2000) 4.44

Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism. Science (1994) 4.11

Antidepressant drugs and generic counselling for treatment of major depression in primary care: randomised trial with patient preference arms. BMJ (2001) 3.81

Randomized, comparative study of interferon beta-1a treatment regimens in MS: The EVIDENCE Trial. Neurology (2002) 3.73

Detection of coronary stenoses on source and projection images using three-dimensional MR angiography with retrospective respiratory gating: preliminary experience. AJR Am J Roentgenol (1998) 3.58

Amelogenin-deficient mice display an amelogenesis imperfecta phenotype. J Biol Chem (2001) 3.50

In vivo visualization of myelin water in brain by magnetic resonance. Magn Reson Med (1994) 3.25

Gene expression profiling of cells, tissues, and developmental stages of the nematode C. elegans. Cold Spring Harb Symp Quant Biol (2003) 3.22

KLF6, a candidate tumor suppressor gene mutated in prostate cancer. Science (2001) 3.22

Adjuvant interferon in high-risk melanoma: the AIM HIGH Study--United Kingdom Coordinating Committee on Cancer Research randomized study of adjuvant low-dose extended-duration interferon Alfa-2a in high-risk resected malignant melanoma. J Clin Oncol (2003) 3.13

A strain-driven morphotropic phase boundary in BiFeO3. Science (2009) 2.95

The canals of Hering and hepatic stem cells in humans. Hepatology (1999) 2.93

Search for a resonance decaying into WZ boson pairs in pp collisions. Phys Rev Lett (2010) 2.83

Immediate early and early lytic cycle proteins are frequent targets of the Epstein-Barr virus-induced cytotoxic T cell response. J Exp Med (1997) 2.76

A Phase II study of the safety and efficacy of teriflunomide in multiple sclerosis with relapses. Neurology (2006) 2.75

Association of B12 deficiency and clinical neuropathy with metformin use in type 2 diabetes patients. J Postgrad Med (2013) 2.75

The cost of treating community-acquired pneumonia. Clin Ther (1998) 2.73

14C-urea breath analysis, a non-invasive test for Campylobacter pylori in the stomach. Lancet (1987) 2.68

Genetic deletion of the Pten tumor suppressor gene promotes cell motility by activation of Rac1 and Cdc42 GTPases. Curr Biol (2000) 2.67

Long-term subcutaneous interferon beta-1a therapy in patients with relapsing-remitting MS. Neurology (2006) 2.64

Extrachromosomal circular copies of the eukaryotic transposable element copia in cultured Drosophila cells. Nature (1981) 2.62

Pneumocystis carinii infection in patients of AIDS in India. J Assoc Physicians India (1993) 2.57

Total synthesis of the gene for an alanine transfer ribonucleic acid from yeast. Nature (1970) 2.51

A geometric snake model for segmentation of medical imagery. IEEE Trans Med Imaging (1997) 2.47

Malaria in India: challenges and opportunities. J Biosci (2008) 2.40

Penile strangulation. Br J Urol (1991) 2.40

Mapping tRNA structure in solution using double-strand-specific ribonuclease V1 from cobra venom. Nucleic Acids Res (1981) 2.40

The prevalence and trends of overweight, obesity and nutrition-related non-communicable diseases in the Arabian Gulf States. Obes Rev (2011) 2.37

Motor vehicle crashes in dementia of the Alzheimer type. Ann Neurol (1988) 2.36

Changing sexual attitudes and behaviour in China: implications for the spread of HIV and other sexually transmitted diseases. AIDS Care (1999) 2.35

Copia-like transposable elements in the Drosophila genome. Cold Spring Harb Symp Quant Biol (1981) 2.35

Genome-wide mutant collections: toolboxes for functional genomics. Curr Opin Microbiol (2000) 2.34

Taking precautions with ACE inhibitors. A theoretical risk exists in patients with unilateral renal artery stenosis. BMJ (1998) 2.32

Comparison of in house polymerase chain reaction with conventional techniques for the detection of Mycobacterium tuberculosis DNA in granulomatous lymphadenopathy. J Clin Pathol (2000) 2.32

Seed-specific over-expression of an Arabidopsis cDNA encoding a diacylglycerol acyltransferase enhances seed oil content and seed weight. Plant Physiol (2001) 2.31

Mycotic aneurysm of left anterior descending artery after sirolimus-eluting stent implantation: a case report. Catheter Cardiovasc Interv (2005) 2.31

The Arabidopsis thaliana TAG1 mutant has a mutation in a diacylglycerol acyltransferase gene. Plant J (1999) 2.30

Structures of two repeats of spectrin suggest models of flexibility. Cell (1999) 2.30

Intravenous immunoglobulin in relapsing-remitting multiple sclerosis: a dose-finding trial. Neurology (2008) 2.29

Randomized trial of intraoperative mitomycin C in surgery for pterygium. Am J Ophthalmol (1998) 2.29

Prevalence and predictors of rhabdomyolysis in patients with hypophosphatemia. Am J Med (1992) 2.24

The p38 mitogen-activated kinase pathway regulates the human interleukin-10 promoter via the activation of Sp1 transcription factor in lipopolysaccharide-stimulated human macrophages. J Biol Chem (2001) 2.23

Cine MR angiography of the heart with segmented true fast imaging with steady-state precession. Radiology (2001) 2.23

Fraud in biomedical science. Natl Med J India (1993) 2.23

Energetics of quasiequivalence: computational analysis of protein-protein interactions in icosahedral viruses. Biophys J (1998) 2.22

A comparative linkage map of oilseed rape and its use for QTL analysis of seed oil and erucic acid content. Theor Appl Genet (2006) 2.21

Multiple 5' terminal cap structures in late polyoma virus RNA. Cell (1979) 2.21

Mid-arm and chest circumferences at birth as predictors of low birth weight and neonatal mortality in the community. Br Med J (Clin Res Ed) (1985) 2.20

Characterization of messenger ribonucleoprotein and messenger RNA from KB cells. Proc Natl Acad Sci U S A (1972) 2.20

Identification of double-stranded RNA-binding domains in the interferon-induced double-stranded RNA-activated p68 kinase. Proc Natl Acad Sci U S A (1992) 2.20

Identification of cellular proteins that bind to the human immunodeficiency virus type 1 trans-activation-responsive TAR element RNA. Proc Natl Acad Sci U S A (1989) 2.14

Supervision registers for mentally ill people. BMJ (1994) 2.14

Pathogenic implications of mutations in the tau gene in pallido-ponto-nigral degeneration and related neurodegenerative disorders linked to chromosome 17. Proc Natl Acad Sci U S A (1998) 2.13

Magnetic resonance imaging of the upper airway in obstructive sleep apnea before and after chronic nasal continuous positive airway pressure therapy. Am Rev Respir Dis (1991) 2.12

Early versus delayed laparoscopic cholecystectomy for acute cholecystitis: a prospective randomized trial. Surg Endosc (2004) 2.12

Treatment practices in pulmonary tuberculosis by private sector physicians of Meerut, Uttar Pradesh. Indian J Chest Dis Allied Sci (2012) 2.11

Analysis of the Escherichia coli glycogen gene cluster suggests that catabolic enzymes are encoded among the biosynthetic genes. Gene (1988) 2.10

Purification and domain structure of core hnRNP proteins A1 and A2 and their relationship to single-stranded DNA-binding proteins. J Biol Chem (1986) 2.09

Prevalence of substance misuse in first-episode psychosis. Br J Psychiatry (1999) 2.09

Scoring treatment response in patients with relapsing multiple sclerosis. Mult Scler (2012) 2.07

MRP4: A previously unidentified factor in resistance to nucleoside-based antiviral drugs. Nat Med (1999) 2.07

Airway mucosa: secretory cells, mucus and mucin genes. Eur Respir J (1997) 2.06

Ty1-copia group retrotransposons are ubiquitous and heterogeneous in higher plants. Nucleic Acids Res (1992) 2.05

Community based retrospective study of sex in infant mortality in India. BMJ (2003) 2.05

Specific amplification of Aspergillus fumigatus DNA by polymerase chain reaction. Mol Cell Probes (1993) 2.05

Genetic distribution of Bare-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP). Mol Gen Genet (1997) 2.05

Care-seeking for fatal illnesses in young children in Indramayu, west Java, Indonesia. Lancet (1993) 2.02

Meconium aspiration syndrome: recent concepts. Indian Pediatr (1993) 2.01

Recovery and identification of West Nile virus from a hawk in winter. J Clin Microbiol (2000) 2.01

Comparison of proteins bound to heterogeneous nuclear RNA and messenger RNA in HeLa cells. J Mol Biol (1975) 2.00

3D magnetization-prepared true-FISP: a new technique for imaging coronary arteries. Magn Reson Med (2001) 2.00

Appropriate and timely antimicrobial therapy in cirrhotic patients with spontaneous bacterial peritonitis-associated septic shock: a retrospective cohort study. Aliment Pharmacol Ther (2015) 1.99

Serum IgG subclass concentrations in healthy adults: a study using monoclonal antisera. Clin Exp Immunol (1984) 1.99

Experience with 'triple' anti-Helicobacter pylori eradication therapy: side effects and the importance of testing the pre-treatment bacterial isolate for metronidazole resistance. Aliment Pharmacol Ther (1992) 1.99

Infection thread formation as a basis of nodulation specificity in Rhizobium--strawberry clover associations. Can J Microbiol (1969) 1.98

Corneal graft rejection. Surv Ophthalmol (2007) 1.96

Ribosome formation is blocked by camptothecin, a reversible inhibitor of RNA synthesis. Proc Natl Acad Sci U S A (1971) 1.96

Analysis of clinical outcomes according to original treatment groups 16 years after the pivotal IFNB-1b trial. J Neurol Neurosurg Psychiatry (2010) 1.94

A role for CREB binding protein and p300 transcriptional coactivators in Ets-1 transactivation functions. Mol Cell Biol (1998) 1.93

Microsatellite instability in colorectal cancer: improved assessment using fluorescent polymerase chain reaction. Gastroenterology (1995) 1.92

Injecting drug use and HIV infection in southwest China. AIDS (1994) 1.91

Artery and vein separation using susceptibility-dependent phase in contrast-enhanced MRA. J Magn Reson Imaging (2000) 1.91

Total synthesis of the structural gene for the precursor of a tyrosine suppressor transfer RNA from Escherichia coli. 1. General introduction. J Biol Chem (1976) 1.91

Routine radio-imaging in filarial chyluria--is it necessary in developing countries? Br J Urol (1992) 1.91

Studies on polynucleotides. 103. Total synthesis of the structural gene for an alanine transfer ribonucleic acid from yeast. J Mol Biol (1972) 1.90

Immunodiagnosis of aspergillosis. Clin Microbiol Rev (1991) 1.90

The 5' termini of RNAs encoded by the transposable element copia. Nucleic Acids Res (1981) 1.89