Published in RNA on October 01, 1996
Linkage map of Escherichia coli K-12, edition 10: the traditional map. Microbiol Mol Biol Rev (1998) 4.18
Ribosome biogenesis and the translation process in Escherichia coli. Microbiol Mol Biol Rev (2007) 2.59
Towards synthesis of a minimal cell. Mol Syst Biol (2006) 2.55
A small nucleolar RNA requirement for site-specific ribose methylation of rRNA in Xenopus. Proc Natl Acad Sci U S A (1996) 2.18
Structure of the E. coli ribosome-EF-Tu complex at <3 Å resolution by Cs-corrected cryo-EM. Nature (2015) 1.83
Retracted Possible involvement of Escherichia coli 23S ribosomal RNA in peptide bond formation. RNA (1998) 1.80
Expanding the nucleotide repertoire of the ribosome with post-transcriptional modifications. ACS Chem Biol (2007) 1.73
Mapping posttranscriptional modifications in 5S ribosomal RNA by MALDI mass spectrometry. RNA (2000) 1.72
Modified nucleotides at the 5' end of human U2 snRNA are required for spliceosomal E-complex formation. RNA (2004) 1.63
Posttranscriptional modifications in 16S and 23S rRNAs of the archaeal hyperthermophile Sulfolobus solfataricus. J Bacteriol (1998) 1.59
Optimization of ribosome structure and function by rRNA base modification. PLoS One (2007) 1.57
A novel partial modification at C2501 in Escherichia coli 23S ribosomal RNA. RNA (2004) 1.33
After the ribosome structures: how are the subunits assembled? RNA (2003) 1.32
Chemical engineering of the peptidyl transferase center reveals an important role of the 2'-hydroxyl group of A2451. Nucleic Acids Res (2005) 1.29
Posttranscriptional modifications in the A-loop of 23S rRNAs from selected archaea and eubacteria. RNA (2002) 1.26
Detection of pseudouridine and other modifications in tRNA by cyanoethylation and MALDI mass spectrometry. Nucleic Acids Res (2002) 1.23
MRM2 encodes a novel yeast mitochondrial 21S rRNA methyltransferase. EMBO J (2002) 1.15
An essential function for the phosphate-dependent exoribonucleases RNase PH and polynucleotide phosphorylase. J Bacteriol (1997) 1.15
Characterization of functionally active subribosomal particles from Thermus aquaticus. Proc Natl Acad Sci U S A (1999) 1.15
The rlmB gene is essential for formation of Gm2251 in 23S rRNA but not for ribosome maturation in Escherichia coli. J Bacteriol (2001) 1.12
Identification of pseudouridine methyltransferase in Escherichia coli. RNA (2008) 1.11
The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a pre-organized SAM-binding site. Nucleic Acids Res (2008) 1.06
In vitro integration of ribosomal RNA synthesis, ribosome assembly, and translation. Mol Syst Biol (2013) 1.05
Post-transcriptional modifications in the small subunit ribosomal RNA from Thermotoga maritima, including presence of a novel modified cytidine. RNA (2007) 1.05
Mutagenesis of the peptidyltransferase center of 23S rRNA: the invariant U2449 is dispensable. Nucleic Acids Res (2001) 1.04
Osmolytes stimulate the reconstitution of functional 50S ribosomes from in vitro transcripts of Escherichia coli 23S rRNA. RNA (2002) 1.00
Crystal structure of RlmM, the 2'O-ribose methyltransferase for C2498 of Escherichia coli 23S rRNA. Nucleic Acids Res (2012) 0.96
An evaluation of detection methods for large lariat RNAs. RNA (2005) 0.94
Suppression of DeltabipA phenotypes in Escherichia coli by abolishment of pseudouridylation at specific sites on the 23S rRNA. J Bacteriol (2008) 0.90
Substrate binding analysis of the 23S rRNA methyltransferase RrmJ. J Bacteriol (2004) 0.89
Isolation of antibiotic resistance mutations in the rRNA by using an in vitro selection system. Proc Natl Acad Sci U S A (2004) 0.89
Puromycin oligonucleotides reveal steric restrictions for ribosome entry and multiple modes of translation inhibition. RNA (2002) 0.89
Functional role of methylation of G518 of the 16S rRNA 530 loop by GidB in Mycobacterium tuberculosis. Antimicrob Agents Chemother (2013) 0.83
Methylation of 23S rRNA nucleotide G745 is a secondary function of the RlmAI methyltransferase. RNA (2004) 0.83
The impact of transcriptional tuning on in vitro integrated rRNA transcription and ribosome construction. Nucleic Acids Res (2014) 0.82
Implications of macromolecular crowding and reducing conditions for in vitro ribosome construction. Nucleic Acids Res (2015) 0.80
Identification of a new ribose methylation in the 18S rRNA of S. cerevisiae. Nucleic Acids Res (2015) 0.79
New features of 23S ribosomal RNA folding: the long helix 41-42 makes a "U-turn" inside the ribosome. RNA (1998) 0.79
Chemical modulators of ribosome biogenesis as biological probes. Nat Chem Biol (2015) 0.77
Substrate recognition and modification by the nosiheptide resistance methyltransferase. PLoS One (2015) 0.76
Synthesis and characterization of modified nucleotides in the 970 hairpin loop of Escherichia coli 16S ribosomal RNA. Bioorg Med Chem (2009) 0.75
Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci U S A (1978) 32.65
Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol (1981) 29.04
Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids. Microbiol Rev (1983) 23.08
Crystal structure of the ribosome at 5.5 A resolution. Science (2001) 18.21
Comparative anatomy of 16-S-like ribosomal RNA. Prog Nucleic Acid Res Mol Biol (1985) 16.21
X-ray crystal structures of 70S ribosome functional complexes. Science (1999) 10.51
Secondary structure model for bacterial 16S ribosomal RNA: phylogenetic, enzymatic and chemical evidence. Nucleic Acids Res (1980) 9.50
Structure of ribosomal RNA. Annu Rev Biochem (1984) 9.44
Construction and fine mapping of recombinant plasmids containing the rrnB ribosomal RNA operon of E. coli. Plasmid (1981) 9.00
Interaction of antibiotics with functional sites in 16S ribosomal RNA. Nature (1987) 8.96
Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension. J Mol Biol (1986) 7.87
Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci U S A (1980) 7.80
Intermediate states in the movement of transfer RNA in the ribosome. Nature (1989) 7.30
Secondary structure model for 23S ribosomal RNA. Nucleic Acids Res (1981) 7.12
Secondary structure of 16S ribosomal RNA. Science (1981) 6.52
Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension. Methods Enzymol (1988) 6.38
Interaction of tRNA with 23S rRNA in the ribosomal A, P, and E sites. Cell (1989) 5.79
Protection of specific sites in 16 S RNA from chemical modification by association of 30 S and 50 S ribosomes. J Mol Biol (1977) 5.66
The path of messenger RNA through the ribosome. Cell (2001) 5.65
Mechanism of ribosomal subunit association: discrimination of specific sites in 16 S RNA essential for association activity. J Mol Biol (1979) 4.88
rII cistrons of bacteriophage T4. DNA sequence around the intercistronic divide and positions of genetic landmarks. J Mol Biol (1981) 4.76
Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes. Cell (1986) 4.65
A base pair between tRNA and 23S rRNA in the peptidyl transferase centre of the ribosome. Nature (1995) 4.59
Interaction of elongation factors EF-G and EF-Tu with a conserved loop in 23S RNA. Nature (1988) 4.53
Chloramphenicol, erythromycin, carbomycin and vernamycin B protect overlapping sites in the peptidyl transferase region of 23S ribosomal RNA. Biochimie (1987) 4.47
The nucleotide sequence of a rat 18 S ribosomal ribonucleic acid gene and a proposal for the secondary structure of 18 S ribosomal ribonucleic acid. J Biol Chem (1984) 4.00
Ribosomes and translation. Annu Rev Biochem (1997) 3.87
A functional pseudoknot in 16S ribosomal RNA. EMBO J (1991) 3.59
Identification of an RNA-protein bridge spanning the ribosomal subunit interface. Science (1999) 3.31
Model for the three-dimensional folding of 16 S ribosomal RNA. J Mol Biol (1988) 3.24
A "bulged" double helix in a RNA-protein contact site. Proc Natl Acad Sci U S A (1981) 3.16
RNA-protein interactions in 30S ribosomal subunits: folding and function of 16S rRNA. Science (1989) 2.97
Higher order structure in ribosomal RNA. EMBO J (1986) 2.97
Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA. J Mol Biol (1990) 2.90
Functional modification of 16S ribosomal RNA by kethoxal. Proc Natl Acad Sci U S A (1972) 2.74
Topography of 16S RNA in 30S ribosomal subunits. Nucleotide sequences and location of sites of reaction with kethoxal. Biochemistry (1974) 2.67
Mutations in 16S ribosomal RNA disrupt antibiotic--RNA interactions. EMBO J (1989) 2.54
Altered topography of 16S RNA in the inactive form of Escherichia coli 30S ribosomal subunits. Biochemistry (1978) 2.44
Amino-acid sequence of glyceraldehyde 3-phosphate dehydrogenase from lobster muscle. Nature (1967) 2.40
Interaction of translation initiation factor 3 with the 30S ribosomal subunit. Mol Cell (2001) 2.34
Sites of interaction of the CCA end of peptidyl-tRNA with 23S rRNA. Proc Natl Acad Sci U S A (1991) 2.34
The structure of the RNA binding site of ribosomal proteins S8 and S15. J Biol Chem (1979) 2.24
Identification of a site on 23S ribosomal RNA located at the peptidyl transferase center. Proc Natl Acad Sci U S A (1984) 2.22
Nucleotide sequence of the 3' terminus of E. coli 16S ribosomal RNA. Mol Biol Rep (1974) 2.13
A fragment of 23S RNA containing a nucleotide sequence complementary to a region of 5S RNA. FEBS Lett (1975) 2.07
Analysis of mutations at residues A2451 and G2447 of 23S rRNA in the peptidyltransferase active site of the 50S ribosomal subunit. Proc Natl Acad Sci U S A (2001) 2.06
Aminoacyl esterase activity of the Tetrahymena ribozyme. Science (1992) 2.06
Mapping the position of translational elongation factor EF-G in the ribosome by directed hydroxyl radical probing. Cell (1998) 2.06
Dynamics of in vitro assembly of 16 S rRNA into 30 S ribosomal subunits. J Mol Biol (1993) 2.02
A cold-sensitive mutation in 16S rRNA provides evidence for helical switching in ribosome assembly. Genes Dev (1993) 2.00
Hydroxyl radical footprinting of ribosomal proteins on 16S rRNA. RNA (1995) 1.98
Interconversion of active and inactive 30 S ribosomal subunits is accompanied by a conformational change in the decoding region of 16 S rRNA. J Mol Biol (1986) 1.97
Interaction of antibiotics with A- and P-site-specific bases in 16S ribosomal RNA. EMBO J (1991) 1.96
Mutations in ribosomal proteins S4 and S12 influence the higher order structure of 16 S ribosomal RNA. J Mol Biol (1989) 1.94
Dominant lethal mutations in a conserved loop in 16S rRNA. Proc Natl Acad Sci U S A (1990) 1.91
Footprinting the sites of interaction of antibiotics with catalytic group I intron RNA. Science (1993) 1.90
Footprinting mRNA-ribosome complexes with chemical probes. EMBO J (1994) 1.84
Localization of the binding site for protein S4 on 16 S ribosomal RNA by chemical and enzymatic probing and primer extension. J Mol Biol (1986) 1.83
Isolation of temperature-sensitive mutants of 16 S rRNA in Escherichia coli. J Mol Biol (1989) 1.82
Protection of specific sites in 23 S and 5 S RNA from chemical modification by association of 30 S and 50 S ribosomes. J Mol Biol (1979) 1.82
Phylogenetic comparative chemical footprint analysis of the interaction between ribonuclease P RNA and tRNA. EMBO J (1994) 1.76
Specific protection of 16 S rRNA by translational initiation factors. J Mol Biol (1995) 1.76
Molecular basis of tetracycline action: identification of analogs whose primary target is not the bacterial ribosome. Antimicrob Agents Chemother (1991) 1.69
EF-G-catalyzed translocation of anticodon stem-loop analogs of transfer RNA in the ribosome. EMBO J (1998) 1.68
Structure of 5 S ribosomal RNA from Escherichia coli: identification of kethoxal-reactive sites in the A and B conformations. J Mol Biol (1979) 1.66
Suppression of a cold-sensitive mutation in 16S rRNA by overexpression of a novel ribosome-binding factor, RbfA. Genes Dev (1995) 1.66
Interaction of ribosomal proteins S5, S6, S11, S12, S18 and S21 with 16 S rRNA. J Mol Biol (1988) 1.63
Defining the structural requirements for a helix in 23 S ribosomal RNA that confers erythromycin resistance. J Mol Biol (1989) 1.57
Molecular movement inside the translational engine. Cell (1998) 1.53
Alteration of polynucleotide secondary structure by ribosomal protein S1. Proc Natl Acad Sci U S A (1976) 1.49
Reconstitution of functional 50S ribosomes from in vitro transcripts of Bacillus stearothermophilus 23S rRNA. Biochemistry (1999) 1.47
Identification of bases in 16S rRNA essential for tRNA binding at the 30S ribosomal P site. Science (1995) 1.46
Structures of complexes of 5S RNA with ribosomal proteins L5, L18 and L25 from Escherichia coli: identification of kethoxal-reactive sites on the 5S RNA. J Mol Biol (1979) 1.45
Independent in vitro assembly of a ribonucleoprotein particle containing the 3' domain of 16S rRNA. Proc Natl Acad Sci U S A (1994) 1.43
Mutations at nucleotides G2251 and U2585 of 23 S rRNA perturb the peptidyl transferase center of the ribosome. J Mol Biol (1997) 1.34
Hydroxyl radical cleavage of tRNA in the ribosomal P site. Proc Natl Acad Sci U S A (1992) 1.34
Protection of ribosomal RNA from kethoxal in polyribosomes. Implication of specific sites in ribosome function. J Mol Biol (1983) 1.33
Nucleotides in 16S rRNA protected by the association of 30S and 50S ribosomal subunits. J Mol Biol (1999) 1.32
Mapping the inside of the ribosome with an RNA helical ruler. Science (1997) 1.31
Interaction of proteins S16, S17 and S20 with 16 S ribosomal RNA. J Mol Biol (1988) 1.29
In vitro reconstitution of 30S ribosomal subunits using complete set of recombinant proteins. Methods Enzymol (2000) 1.29
Probing the conformation of 18S rRNA in yeast 40S ribosomal subunits with kethoxal. Biochemistry (1984) 1.28
Ribosome-catalyzed peptide-bond formation with an A-site substrate covalently linked to 23S ribosomal RNA. Science (1998) 1.27
Directed hydroxyl radical probing of 16S rRNA using Fe(II) tethered to ribosomal protein S4. Proc Natl Acad Sci U S A (1995) 1.27
Directed hydroxyl radical probing of RNA from iron(II) tethered to proteins in ribonucleoprotein complexes. Methods Enzymol (2000) 1.26
Interaction of ribosomal proteins, S6, S8, S15 and S18 with the central domain of 16 S ribosomal RNA. J Mol Biol (1988) 1.26
Complete nucleotide sequence of a 23S ribosomal RNA gene from Bacillus stearothermophilus. DNA (1984) 1.25
Identification of a site of psoralen crosslinking in E. coli 16S ribosomal RNA. Nucleic Acids Res (1982) 1.24
Identification of a ribosomal protein essential for peptidyl transferase activity. Proc Natl Acad Sci U S A (1975) 1.24
Selective perturbation of G530 of 16 S rRNA by translational miscoding agents and a streptomycin-dependence mutation in protein S12. J Mol Biol (1994) 1.24
Mapping the rRNA neighborhood of the acceptor end of tRNA in the ribosome. EMBO J (1996) 1.22
Nucleotides in 23S rRNA protected by the association of 30S and 50S ribosomal subunits. J Mol Biol (1999) 1.21
Isolation and restriction mapping of plasmids containing ribosomal DNA sequences from the rrn B cistron of E. coli. Mol Gen Genet (1979) 1.20
Probing the assembly of the 3' major domain of 16 S ribosomal RNA. Quaternary interactions involving ribosomal proteins S7, S9 and S19. J Mol Biol (1988) 1.19
Nucleotide sequences of accessible regions of 23S RNA in 50S ribosomal subunits. Biochemistry (1978) 1.18
Characterization of functionally active subribosomal particles from Thermus aquaticus. Proc Natl Acad Sci U S A (1999) 1.15