GenBank.

PubWeight™: 9.36‹?› | Rank: Top 0.1%

🔗 View Article (PMC 147205)

Published in Nucleic Acids Res on January 01, 1998

Authors

D A Benson1, M S Boguski, D J Lipman, J Ostell, B F Ouellette

Author Affiliations

1: National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA. dab@ncbi.nlm.nih.gov

Articles citing this

GenBank. Nucleic Acids Res (2000) 36.75

Protein sequence similarity searches using patterns as seeds. Nucleic Acids Res (1998) 23.87

Ab initio gene finding in Drosophila genomic DNA. Genome Res (2000) 19.23

Apollo: a sequence annotation editor. Genome Biol (2002) 10.77

An integrated computational pipeline and database to support whole-genome sequence annotation. Genome Biol (2002) 5.24

Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis. Proc Natl Acad Sci U S A (1999) 5.04

Scriptable access to the Caenorhabditis elegans genome sequence and other ACEDB databases. Genome Res (1998) 4.98

Mining molecular binding terminology from biomedical text. Proc AMIA Symp (1999) 4.79

A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters. Nucleic Acids Res (2000) 4.53

Specific ribosomal DNA sequences from diverse environmental settings correlate with experimental contaminants. Appl Environ Microbiol (1998) 4.08

Genome-scale metabolic model of Helicobacter pylori 26695. J Bacteriol (2002) 4.00

Analysis of flanking sequences from dissociation insertion lines: a database for reverse genetics in Arabidopsis. Plant Cell (1999) 3.65

Improved amplification of microbial DNA from blood cultures by removal of the PCR inhibitor sodium polyanetholesulfonate. J Clin Microbiol (1998) 3.38

Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes. Appl Environ Microbiol (2000) 3.29

Molecular typing of Borrelia burgdorferi sensu lato: taxonomic, epidemiological, and clinical implications. Clin Microbiol Rev (1999) 2.82

A library-based bioinformatics services program. Bull Med Libr Assoc (2000) 2.73

Ubiquity and diversity of dissimilatory (per)chlorate-reducing bacteria. Appl Environ Microbiol (1999) 2.44

An ordered comparative map of the cattle and human genomes. Genome Res (2000) 2.38

Nature and structure of human genes that generate retropseudogenes. Genome Res (2000) 2.21

Can bibliographic pointers for known biological data be found automatically? Protein interactions as a case study. Comp Funct Genomics (2001) 2.21

Self-identification of protein-coding regions in microbial genomes. Proc Natl Acad Sci U S A (1998) 2.17

Whole-transcriptome RNAseq analysis from minute amount of total RNA. Nucleic Acids Res (2011) 1.97

Distribution of archaea in a black smoker chimney structure. Appl Environ Microbiol (2001) 1.82

Evolutionary relationships among self-incompatibility RNases. Proc Natl Acad Sci U S A (2001) 1.70

Catalytic efficiency and vitality of HIV-1 proteases from African viral subtypes. Proc Natl Acad Sci U S A (2001) 1.64

Molecular cloning and phylogenetic analysis of human immunodeficiency virus type 1 subtype C: a set of 23 full-length clones from Botswana. J Virol (1999) 1.61

Dissimilatory nitrite reductase genes from autotrophic ammonia-oxidizing bacteria. Appl Environ Microbiol (2001) 1.58

In situ, real-time catabolic gene expression: extraction and characterization of naphthalene dioxygenase mRNA transcripts from groundwater. Appl Environ Microbiol (1999) 1.45

Prevalence of corynebacterial 16S rRNA sequences in patients with bacterial and "nonbacterial" prostatitis. J Clin Microbiol (1999) 1.45

Sources and species of cryptosporidium oocysts in the Wachusett Reservoir watershed. Appl Environ Microbiol (2002) 1.37

Molecular analysis of diazotroph diversity in the rhizosphere of the smooth cordgrass, Spartina alterniflora. Appl Environ Microbiol (2000) 1.37

PRT1 of Arabidopsis thaliana encodes a component of the plant N-end rule pathway. Proc Natl Acad Sci U S A (1998) 1.34

Recovery and phylogenetic analysis of nifH sequences from diazotrophic bacteria associated with dead aboveground biomass of Spartina alterniflora. Appl Environ Microbiol (2001) 1.28

Bioinformatics in support of molecular medicine. Proc AMIA Symp (1998) 1.25

Identification and characterization of a second melanin-concentrating hormone receptor, MCH-2R. Proc Natl Acad Sci U S A (2001) 1.24

Analysis of subfossil molecular remains of purple sulfur bacteria in a lake sediment. Appl Environ Microbiol (1998) 1.22

Diversity and ubiquity of bacteria capable of utilizing humic substances as electron donors for anaerobic respiration. Appl Environ Microbiol (2002) 1.16

Spatial distribution of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems. Appl Environ Microbiol (2004) 1.12

Molecular phylogenetic analysis of archaeal intron-containing genes coding for rRNA obtained from a deep-subsurface geothermal water pool. Appl Environ Microbiol (1999) 1.10

Codon reassignment and amino acid composition in hemichordate mitochondria. Proc Natl Acad Sci U S A (1998) 1.09

Isolation and metabolic characteristics of previously uncultured members of the order aquificales in a subsurface gold mine. Appl Environ Microbiol (2002) 1.08

The human (PEDB) and mouse (mPEDB) Prostate Expression Databases. Nucleic Acids Res (2002) 1.08

Microbial diversity in inactive chimney structures from deep-sea hydrothermal systems. Microb Ecol (2004) 1.08

Sentra, a database of signal transduction proteins. Nucleic Acids Res (2002) 1.06

Interspecific variability in sensitivity to UV radiation and subsequent recovery in selected isolates of marine bacteria. Appl Environ Microbiol (2000) 1.05

Distribution and phylogenetic diversity of the subsurface microbial community in a Japanese epithermal gold mine. Extremophiles (2003) 1.03

Bacterial symbiont transmission in the wood-boring shipworm Bankia setacea (Bivalvia: Teredinidae). Appl Environ Microbiol (2000) 1.02

Transcriptional responses in the hemiparasitic plant Triphysaria versicolor to host plant signals. Plant Physiol (2001) 1.00

Monophyly of brachiopods and phoronids: reconciliation of molecular evidence with Linnaean classification (the subphylum Phoroniformea nov.). Proc Biol Sci (2000) 1.00

tmRDB (tmRNA database). Nucleic Acids Res (2000) 1.00

Purification and characterization of three thermostable endochitinases of a noble Bacillus strain, MH-1, isolated from chitin-containing compost. Appl Environ Microbiol (1998) 0.95

Phylogenetic analysis of the hypervariable region of the 18S rRNA gene of Cryptosporidium oocysts in feces of Canada geese (Branta canadensis): evidence for five novel genotypes. Appl Environ Microbiol (2004) 0.93

Clonable progenitors committed to the T lymphocyte lineage in the mouse bone marrow; use of an extrathymic pathway. Proc Natl Acad Sci U S A (2001) 0.93

Biological control of hog waste odor through stimulated microbial Fe(III) reduction. Appl Environ Microbiol (2005) 0.88

Inhibitor-induced conformational shifts and ligand-exchange dynamics for HIV-1 protease measured by pulsed EPR and NMR spectroscopy. J Phys Chem B (2012) 0.84

DNA sequence chromatogram browsing using JAVA and CORBA. Genome Res (1999) 0.84

Marinobacter alkaliphilus sp. nov., a novel alkaliphilic bacterium isolated from subseafloor alkaline serpentine mud from Ocean Drilling Program Site 1200 at South Chamorro Seamount, Mariana Forearc. Extremophiles (2004) 0.81

MAPI: towards the integrated exploitation of bioinformatics Web Services. BMC Bioinformatics (2011) 0.80

PCR primers for an aldolase-B intron in acanthopterygian fishes. BMC Evol Biol (2001) 0.80

Genome Sequence of Campylobacter jejuni strain 327, a strain isolated from a turkey slaughterhouse. Stand Genomic Sci (2011) 0.79

iVirus: facilitating new insights in viral ecology with software and community data sets imbedded in a cyberinfrastructure. ISME J (2016) 0.79

An effective approach for analyzing "prefinished" genomic sequence data. Genome Res (1999) 0.78

Human immunodeficiency virus type 1 Tat binds to Candida albicans, inducing hyphae but augmenting phagocytosis in vitro. Immunology (2001) 0.77

Negative Smad expression and regulation in the developing chick limb. PLoS One (2009) 0.77

Active-site mutations in the South african human immunodeficiency virus type 1 subtype C protease have a significant impact on clinical inhibitor binding: kinetic and thermodynamic study. J Virol (2008) 0.76

MHCWeb: converting a WWW database into a knowledge-based collaborative environment. Proc AMIA Symp (1998) 0.75

Desulfonatronum zhilinae sp. nov., a novel haloalkaliphilic sulfate-reducing bacterium from soda Lake Alginskoe, Trans-Baikal Region, Russia. Extremophiles (2015) 0.75

Pericentric satellite DNA and molecular phylogeny in Acomys (Rodentia). Chromosome Res (1999) 0.75

Articles by these authors

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31

Basic local alignment search tool. J Mol Biol (1990) 659.07

Improved tools for biological sequence comparison. Proc Natl Acad Sci U S A (1988) 193.60

Rapid and sensitive protein similarity searches. Science (1985) 76.83

Rapid similarity searches of nucleic acid and protein data banks. Proc Natl Acad Sci U S A (1983) 53.12

A genomic perspective on protein families. Science (1997) 50.51

dbEST--database for "expressed sequence tags". Nat Genet (1993) 41.10

Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment. Science (1993) 36.84

GenBank. Nucleic Acids Res (2000) 36.75

Comparative genomics of the eukaryotes. Science (2000) 26.62

Protein sequence similarity searches using patterns as seeds. Nucleic Acids Res (1998) 23.87

GenBank. Nucleic Acids Res (1999) 21.47

Issues in searching molecular sequence databases. Nat Genet (1994) 19.28

The transcriptional program in the response of human fibroblasts to serum. Science (1999) 19.19

On the statistical significance of nucleic acid similarities. Nucleic Acids Res (1984) 18.21

A workbench for multiple alignment construction and analysis. Proteins (1991) 16.96

A gene map of the human genome. Science (1996) 14.32

Weights for data related by a tree. J Mol Biol (1989) 12.63

A physical map of 30,000 human genes. Science (1998) 12.43

Gene expression informatics--it's all in your mine. Nat Genet (1999) 12.35

Evolutionary parameters of the transcribed mammalian genome: an analysis of 2,820 orthologous rodent and human sequences. Proc Natl Acad Sci U S A (1998) 11.90

BIND--The Biomolecular Interaction Network Database. Nucleic Acids Res (2001) 11.74

GenBank. Nucleic Acids Res (1997) 11.73

Experimental annotation of the human genome using microarray technology. Nature (2001) 10.39

Genome cross-referencing and XREFdb: implications for the identification and analysis of genes mutated in human disease. Nat Genet (1997) 10.14

GenBank. Nucleic Acids Res (1993) 9.06

Data management and analysis for gene expression arrays. Nat Genet (1998) 8.60

Positional cloning of the gene for multiple endocrine neoplasia-type 1. Science (1997) 7.95

Database divisions and homology search files: a guide for the perplexed. Genome Res (1997) 7.60

GenBank. Nucleic Acids Res (1996) 7.06

Mapping sequenced E.coli genes by computer: software, strategies and examples. Nucleic Acids Res (1991) 6.29

ESTablishing a human transcript map. Nat Genet (1995) 5.89

Sequence diversity in CYP3A promoters and characterization of the genetic basis of polymorphic CYP3A5 expression. Nat Genet (2001) 5.80

GenBank. Nucleic Acids Res (1994) 5.63

Protein database searches for multiple alignments. Proc Natl Acad Sci U S A (1990) 5.52

A repeating amino acid motif in CDC23 defines a family of proteins and a new relationship among genes required for mitosis and RNA synthesis. Cell (1990) 4.76

Positionally cloned human disease genes: patterns of evolutionary conservation and functional motifs. Proc Natl Acad Sci U S A (1997) 4.40

Gene discovery in dbEST. Science (1994) 4.32

Comparative analysis of 1196 orthologous mouse and human full-length mRNA and protein sequences. Genome Res (1996) 4.11

Alignment of Escherichia coli K12 DNA sequences to a genomic restriction map. Nucleic Acids Res (1990) 4.07

The National Center for Biotechnology Information. Genomics (1990) 4.01

A local alignment tool for very long DNA sequences. Comput Appl Biosci (1995) 3.58

The A20 cDNA induced by tumor necrosis factor alpha encodes a novel type of zinc finger protein. J Biol Chem (1990) 3.41

Lineage-specific loss and divergence of functionally linked genes in eukaryotes. Proc Natl Acad Sci U S A (2000) 3.27

Extracting protein alignment models from the sequence database. Nucleic Acids Res (1997) 3.17

Mutations in the gene encoding KRIT1, a Krev-1/rap1a binding protein, cause cerebral cavernous malformations (CCM1). Hum Mol Genet (1999) 3.15

A novel RING finger protein interacts with the cytoplasmic domain of CD40. J Biol Chem (1994) 3.13

Human and nematode orthologs--lessons from the analysis of 1800 human genes and the proteome of Caenorhabditis elegans. Gene (1999) 2.78

The nucleotide sequence of chromosome I from Saccharomyces cerevisiae. Proc Natl Acad Sci U S A (1995) 2.74

Frequent human genomic DNA transduction driven by LINE-1 retrotransposition. Genome Res (2000) 2.60

Structure and evolution of a human erythroid transcription factor. Nature (1990) 2.47

Contextual constraints on synonymous codon choice. J Mol Biol (1983) 2.47

Yeast genes and human disease. Nature (1996) 2.37

Comparative genomics, genome cross-referencing and XREFdb. Trends Genet (1995) 2.35

The human pregnane X receptor: genomic structure and identification and functional characterization of natural allelic variants. Pharmacogenetics (2001) 2.29

Evolutionary conservation and somatic mutation hotspot maps of p53: correlation with p53 protein structural and functional features. Oncogene (1999) 2.19

Equal animals. Nature (1990) 2.09

A survey of human disease gene counterparts in the Drosophila genome. J Cell Biol (2000) 2.09

Mutations in the ABC1 gene in familial HDL deficiency with defective cholesterol efflux. Lancet (1999) 2.02

A tool for aligning very similar DNA sequences. Comput Appl Biosci (1997) 1.97

Identification of a cytidine-specific ribonuclease from chicken liver. J Biol Chem (1980) 1.85

A transcript map for the 2.8-Mb region containing the multiple endocrine neoplasia type 1 locus. Genome Res (1997) 1.82

Synonymous and nonsynonymous substitution distances are correlated in mouse and rat genes. J Mol Evol (1998) 1.79

TPR proteins as essential components of the yeast cell cycle. Cold Spring Harb Symp Quant Biol (1991) 1.75

Expression of rat apolipoprotein A-IV and A-I genes: mRNA induction during development and in response to glucocorticoids and insulin. Proc Natl Acad Sci U S A (1985) 1.61

MMDB: an ASN.1 specification for macromolecular structure. Proc Int Conf Intell Syst Mol Biol (1995) 1.61

Rat apolipoprotein A-IV contains 13 tandem repetitions of a 22-amino acid segment with amphipathic helical potential. Proc Natl Acad Sci U S A (1984) 1.46

Comparative analysis of the beta transducin family with identification of several new members including PWP1, a nonessential gene of Saccharomyces cerevisiae that is divergently transcribed from NMT1. Proteins (1992) 1.42

Proto-vav and gene expression. Nature (1992) 1.41

cDNA sequence and homologies of the "57-kDa" nucleotide-binding subunit of the vacuolar ATPase from Arabidopsis. J Biol Chem (1988) 1.34

Threading analysis suggests that the obese gene product may be a helical cytokine. FEBS Lett (1995) 1.26

A YAC-based physical map of the mouse genome. Nat Genet (1999) 1.22

Interaction of silent and replacement changes in eukaryotic coding sequences. J Mol Evol (1985) 1.18

Structure and expression of the human apolipoprotein A-IV gene. J Biol Chem (1987) 1.17

Comparative analysis of repeated sequences in rat apolipoproteins A-I, A-IV, and E. Proc Natl Acad Sci U S A (1985) 1.16

Structural organization of Escherichia coli tRNAtyr gene clusters in four different transducing bacteriophages. J Mol Biol (1979) 1.10

Genes conserved in yeast and humans. Hum Mol Genet (1994) 1.06

Linking yeast genetics to mammalian genomes: identification and mapping of the human homolog of CDC27 via the expressed sequence tag (EST) data base. Proc Natl Acad Sci U S A (1993) 1.05

A 2.8-Mb clone contig of the multiple endocrine neoplasia type 1 (MEN1) region at 11q13. Genomics (1997) 1.00

Comparative analysis of nucleic acid sequences by their general constraints. Nucleic Acids Res (1982) 1.00

An algorithm for searching restriction maps. Comput Appl Biosci (1990) 1.00

The nucleotide and derived amino acid sequence of human apolipoprotein A-IV mRNA and the close linkage of its gene to the genes of apolipoproteins A-I and C-III. J Biol Chem (1986) 1.00

MRS6--yeast homologue of the choroideraemia gene. Nat Genet (1993) 0.99

Eighteen new polymorphic markers in the multiple endocrine neoplasia type 1 (MEN1) region. Hum Genet (1997) 0.99

GeneScape: a relational database of Escherichia coli genomic map data for Macintosh computers. Comput Appl Biosci (1992) 0.99

The first lipocalin with enzymatic activity. Trends Biochem Sci (1991) 0.98

On computer-assisted analysis of biological sequences: proline punctuation, consensus sequences, and apolipoprotein repeats. J Lipid Res (1986) 0.96

Expanding family. Nature (1990) 0.96

Evolution of the apolipoproteins. Structure of the rat apo-A-IV gene and its relationship to the human genes for apo-A-I, C-III, and E. J Biol Chem (1986) 0.96