Published in Mol Biol Evol on May 01, 2000
Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model. BMC Evol Biol (2007) 3.09
The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba. Proc Natl Acad Sci U S A (2002) 2.64
Does a tree-like phylogeny only exist at the tips in the prokaryotes? Proc Biol Sci (2004) 2.05
A spliceosomal intron in Giardia lamblia. Proc Natl Acad Sci U S A (2002) 1.95
How many novel eukaryotic 'kingdoms'? Pitfalls and limitations of environmental DNA surveys. BMC Biol (2004) 1.89
Mapping the tree of life: progress and prospects. Microbiol Mol Biol Rev (2009) 1.87
Heterotachy and long-branch attraction in phylogenetics. BMC Evol Biol (2005) 1.86
The origin and diversification of eukaryotes: problems with molecular phylogenetics and molecular clock estimation. Philos Trans R Soc Lond B Biol Sci (2006) 1.71
Early-branching or fast-evolving eukaryotes? An answer based on slowly evolving positions. Proc Biol Sci (2000) 1.69
Local molecular clocks in three nuclear genes: divergence times for rodents and other mammals and incompatibility among fossil calibrations. J Mol Evol (2003) 1.59
Evaluating support for the current classification of eukaryotic diversity. PLoS Genet (2006) 1.55
Cdt1 degradation to prevent DNA re-replication: conserved and non-conserved pathways. Cell Div (2007) 1.42
Increased gene sampling strengthens support for higher-level groups within leaf-mining moths and relatives (Lepidoptera: Gracillariidae). BMC Evol Biol (2011) 1.33
Genomic data do not support comb jellies as the sister group to all other animals. Proc Natl Acad Sci U S A (2015) 1.31
Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes. BMC Evol Biol (2006) 1.17
History of myxozoan character evolution on the basis of rDNA and EF-2 data. BMC Evol Biol (2010) 1.07
Site-specific time heterogeneity of the substitution process and its impact on phylogenetic inference. BMC Evol Biol (2011) 1.00
Long branch effects distort maximum likelihood phylogenies in simulations despite selection of the correct model. PLoS One (2012) 0.98
Revised small subunit rRNA analysis provides further evidence that Foraminifera are related to Cercozoa. J Mol Evol (2003) 0.96
The origin of modern frogs (Neobatrachia) was accompanied by acceleration in mitochondrial and nuclear substitution rates. BMC Genomics (2012) 0.93
New rRNA gene-based phylogenies of the Alphaproteobacteria provide perspective on major groups, mitochondrial ancestry and phylogenetic instability. PLoS One (2013) 0.91
Rooting the tree of life: the phylogenetic jury is still out. Philos Trans R Soc Lond B Biol Sci (2015) 0.91
Evaluation of the models handling heterotachy in phylogenetic inference. BMC Evol Biol (2007) 0.89
Afrobatrachian mitochondrial genomes: genome reorganization, gene rearrangement mechanisms, and evolutionary trends of duplicated and rearranged genes. BMC Genomics (2013) 0.89
Meta-analysis of general bacterial subclades in whole-genome phylogenies using tree topology profiling. Evol Bioinform Online (2012) 0.75
The origin of red algae and the evolution of chloroplasts. Nature (2000) 2.83
Bacterial mode of replication with eukaryotic-like machinery in a hyperthermophilic archaeon. Science (2000) 2.64
Improved phylogenomic taxon sampling noticeably affects nonbilaterian relationships. Mol Biol Evol (2010) 2.39
Heterotachy, an important process of protein evolution. Mol Biol Evol (2002) 2.34
16S rRNA and 16S to 23S internal transcribed spacer sequence analyses reveal inter- and intraspecific Bifidobacterium phylogeny. Int J Syst Bacteriol (1996) 2.21
Archaea sister group of Bacteria? Indications from tree reconstruction artifacts in ancient phylogenies. Mol Biol Evol (1999) 1.87
Phylogeny of dermatophytes and dimorphic fungi based on large subunit ribosomal RNA sequence comparisons. J Med Vet Mycol (1994) 1.84
The evolutionary history of ribosomal protein RpS14: horizontal gene transfer at the heart of the ribosome. Trends Genet (2000) 1.82
ERV-L elements: a family of endogenous retrovirus-like elements active throughout the evolution of mammals. J Virol (1999) 1.70
Early-branching or fast-evolving eukaryotes? An answer based on slowly evolving positions. Proc Biol Sci (2000) 1.69
Species sampling has a major impact on phylogenetic inference. Mol Phylogenet Evol (1993) 1.68
Where is the root of the universal tree of life? Bioessays (1999) 1.53
Presence of a mitochondrial-type 70-kDa heat shock protein in Trichomonas vaginalis suggests a very early mitochondrial endosymbiosis in eukaryotes. Proc Natl Acad Sci U S A (1996) 1.49
Evidence for loss of mitochondria in Microsporidia from a mitochondrial-type HSP70 in Nosema locustae. Mol Biochem Parasitol (1997) 1.43
Sorghum phosphoenolpyruvate carboxylase gene family: structure, function and molecular evolution. Plant Mol Biol (1993) 1.40
Human myosin VIIA responsible for the Usher 1B syndrome: a predicted membrane-associated motor protein expressed in developing sensory epithelia. Proc Natl Acad Sci U S A (1996) 1.38
An evolutionary view of drug-receptor interaction: the bioamine receptor family. Trends Pharmacol Sci (1995) 1.33
The new phylogeny of eukaryotes. Curr Opin Genet Dev (2000) 1.31
What is the phylogenetic position of Cryptosporidium? Int J Syst Evol Microbiol (2000) 1.29
Identification of putative chromosomal origins of replication in Archaea. Mol Microbiol (1999) 1.26
The root of the tree of life in the light of the covarion model. J Mol Evol (1999) 1.24
Opinion: long branch attraction and protist phylogeny. Protist (2000) 1.17
The product of the mammalian orthologue of the Saccharomyces cerevisiae HBS1 gene is phylogenetically related to eukaryotic release factor 3 (eRF3) but does not carry eRF3-like activity. FEBS Lett (1998) 1.11
Molecular phylogeny: pitfalls and progress. Int Microbiol (2000) 1.08
Reverse gyrase from hyperthermophiles: probable transfer of a thermoadaptation trait from archaea to bacteria. Trends Genet (2000) 1.07
Innate immunity. Isolation of several cysteine-rich antimicrobial peptides from the blood of a mollusc, Mytilus edulis. J Biol Chem (1996) 1.07
Critical analysis of eukaryotic phylogeny: a case study based on the HSP70 family. J Eukaryot Microbiol (1999) 1.05
New insights into the phylogeny of eukaryotes based on ciliate Hsp70 sequences. Mol Biol Evol (1998) 1.05
The major lines of metazoan evolution: summary of traditional evidence and lessons from ribosomal RNA sequence analysis. EXS (1993) 1.05
Smr: a bacterial and eukaryotic homologue of the C-terminal region of the MutS2 family. Trends Biochem Sci (1999) 1.04
An evaluation of elongation factor 1 alpha as a phylogenetic marker for eukaryotes. Mol Biol Evol (1999) 1.01
Unusually high evolutionary rate of the elongation factor 1 alpha genes from the Ciliophora and its impact on the phylogeny of eukaryotes. Mol Biol Evol (1999) 0.99
Phylogeny of trichomonads based on partial sequences of large subunit rRNA and on cladistic analysis of morphological data. J Eukaryot Microbiol (1993) 0.95
Rodent monophyly: pitfalls of molecular phylogenies. J Mol Evol (1997) 0.95
VALAB: expert system for validation of biochemical data. Clin Chem (1992) 0.93
Structural and functional properties of thesaurin a (42Sp50), the major protein of the 42 S particles present in Xenopus laevis previtellogenic oocytes. J Biol Chem (1991) 0.92
Composition strand asymmetries in prokaryotic genomes: mutational bias and biased gene orientation. C R Acad Sci III (2001) 0.92
Four mismatch repair paralogues coexist in Arabidopsis thaliana: AtMSH2, AtMSH3, AtMSH6-1 and AtMSH6-2. Mol Gen Genet (1999) 0.92
On the conservation of protein sequences in evolution. Trends Biochem Sci (2001) 0.92
The last universal common ancestor (LUCA), simple or complex? Biol Bull (1999) 0.92
Origin of replication of Thermotoga maritima. Trends Genet (2000) 0.88
Horizontal transfers confuse the prokaryotic phylogeny based on the HSP70 protein family. Mol Microbiol (1999) 0.87
Cloning and analysis of a Trichinella britovi gene encoding a cytoplasmic heat shock protein of 72 kDa. Parasitology (1999) 0.87
[Acardiac twins: pronostics markers' study]. Gynecol Obstet Fertil (2011) 0.86
How many nucleotides are required to resolve a phylogenetic problem? The use of a new statistical method applicable to available sequences. Mol Phylogenet Evol (1994) 0.86
The gene encoding the nucleocapsid protein: sequence analysis in murine hepatitis virus type 3 and evolution in Coronaviridae. Arch Virol (1993) 0.84
Molecular evolution of protein O-fucosyltransferase genes and splice variants. Glycobiology (2006) 0.83
Molecular phylogenetic studies on Theileria parasites based on small subunit ribosomal RNA gene sequences. Vet Parasitol (1999) 0.82
Sure facts and open questions about the origin and evolution of photosynthetic plastids. Res Microbiol (2001) 0.80
Characterization and detection of plant trypanosomatids by sequence analysis of the small subunit ribosomal RNA gene. Mol Biochem Parasitol (1995) 0.78
Analysis of variability among endogenous ecotropic MuLV loci in laboratory mice. Virology (1993) 0.78
Molecular evidence that the proliferative kidney disease organism unknown (PKX) is a myxosporean. Dis Aquat Organ (1999) 0.78
The classification of bioamine receptors. How helpful are molecular phylogenies? Ann N Y Acad Sci (1997) 0.77
Expression patterns of an Otx2 and an Otx5 orthologue in the urodele Pleurodeles waltl: implications on the evolutionary relationships between the balancers and cement gland in amphibians. Dev Genes Evol (2002) 0.77
[Psychiatric testimony and news media interpretations]. Ann Med Psychol (Paris) (1970) 0.75
[European normative recommendations for medical gas pipeline systems]. Ann Fr Anesth Reanim (2005) 0.75
Bioamine receptors: evolutionary and functional variations of a structural leitmotiv. EXS (1993) 0.75
[Structural and functional diversity of homeodomain genes of the orthodenticle and empty spiracles classes in Craniata]. J Soc Biol (2000) 0.75
The phylogenetic position of Dimastigella trypaniformis within the parasitic kinetoplastids. Parasitol Res (1994) 0.75