PubRank

G D Stormo

Author PubWeight™ 193.54‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Information content of binding sites on nucleotide sequences. J Mol Biol 1986 30.48
2 Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Bioinformatics 1999 14.36
3 Characterization of translational initiation sites in E. coli. Nucleic Acids Res 1982 11.91
4 Use of the 'Perceptron' algorithm to distinguish translational initiation sites in E. coli. Nucleic Acids Res 1982 9.99
5 A design for computer nucleic-acid-sequence storage, retrieval, and manipulation. Nucleic Acids Res 1982 7.79
6 Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods. Nucleic Acids Res 1992 7.51
7 Identification of consensus patterns in unaligned DNA sequences known to be functionally related. Comput Appl Biosci 1990 6.16
8 Displaying the information contents of structural RNA alignments: the structure logos. Comput Appl Biosci 1997 5.51
9 Excess information at bacteriophage T7 genomic promoters detected by a random cloning technique. Nucleic Acids Res 1989 5.22
10 Selection of optimal DNA oligos for gene expression arrays. Bioinformatics 2001 5.19
11 Splicing signals in Drosophila: intron size, information content, and consensus sequences. Nucleic Acids Res 1992 4.93
12 Consensus patterns in DNA. Methods Enzymol 1990 4.89
13 Delila system tools. Nucleic Acids Res 1984 4.84
14 Finding the most significant common sequence and structure motifs in a set of RNA sequences. Nucleic Acids Res 1997 4.04
15 Information content and free energy in DNA--protein interactions. J Theor Biol 1998 3.91
16 ANN-Spec: a method for discovering transcription factor binding sites with improved specificity. Pac Symp Biocomput 2000 3.66
17 Sequence requirements of the hammerhead RNA self-cleavage reaction. Biochemistry 1990 3.64
18 Non-independence of Mnt repressor-operator interaction determined by a new quantitative multiple fluorescence relative affinity (QuMFRA) assay. Nucleic Acids Res 2001 3.63
19 Identification of coding regions in genomic DNA sequences: an application of dynamic programming and neural networks. Nucleic Acids Res 1993 3.15
20 Translation initiation in Escherichia coli: sequences within the ribosome-binding site. Mol Microbiol 1992 3.10
21 Quantitative analysis of the relationship between nucleotide sequence and functional activity. Nucleic Acids Res 1986 3.02
22 MATRIX SEARCH 1.0: a computer program that scans DNA sequences for transcriptional elements using a database of weight matrices. Comput Appl Biosci 1995 2.83
23 Modeling regulatory networks with weight matrices. Pac Symp Biocomput 1999 2.52
24 lacZ translation initiation mutations. J Mol Biol 1984 2.51
25 A comparative genomics approach to prediction of new members of regulons. Genome Res 2001 2.37
26 Autogenous regulatory site on the bacteriophage T4 gene 32 messenger RNA. J Mol Biol 1988 2.32
27 Identifying target sites for cooperatively binding factors. Bioinformatics 2001 2.31
28 Expectation maximization algorithm for identifying protein-binding sites with variable lengths from unaligned DNA fragments. J Mol Biol 1992 2.29
29 Discovering common stem-loop motifs in unaligned RNA sequences. Nucleic Acids Res 2001 2.12
30 Quantitative specificity of the Mnt repressor. J Mol Biol 1997 1.91
31 A consensus sequence for binding of Lrp to DNA. J Bacteriol 1995 1.88
32 Identification of protein coding regions in genomic DNA. J Mol Biol 1995 1.77
33 An RNA folding method capable of identifying pseudoknots and base triples. Bioinformatics 1998 1.66
34 Quantitative analysis of ribosome binding sites in E.coli. Nucleic Acids Res 1994 1.63
35 Escherichia coli promoter sequences: analysis and prediction. Methods Enzymol 1996 1.61
36 Autoregulation of gene expression. Quantitative evaluation of the expression and function of the bacteriophage T4 gene 32 (single-stranded DNA binding) protein system. J Mol Biol 1982 1.57
37 SAMIE: statistical algorithm for modeling interaction energies. Pac Symp Biocomput 2001 1.17
38 Phylogenetically enhanced statistical tools for RNA structure prediction. Bioinformatics 2000 1.14
39 Automated kinetic assay of beta-galactosidase activity. Biotechniques 1991 1.10
40 Sequence landscapes. Nucleic Acids Res 1986 1.10
41 High-level translation initiation. Methods Enzymol 1990 1.04
42 Analysis of five presumptive protein-coding sequences clustered between the primosome genes, 41 and 61, of bacteriophages T4, T2, and T6. J Virol 1993 0.96
43 Detection of deletions in the mitochondrial genome of Caenorhabditis elegans. Nucleic Acids Res 1994 0.91
44 PromFD 1.0: a computer program that predicts eukaryotic pol II promoters using strings and IMD matrices. Comput Appl Biosci 1997 0.91
45 Identifying muscle regulatory elements and genes in the nematode Caenorhabditis elegans. Pac Symp Biocomput 2002 0.91
46 A phylogenetic approach to RNA structure prediction. Proc Int Conf Intell Syst Mol Biol 1999 0.87
47 Injury in the era of genomics. Shock 2001 0.87
48 Neural networks for determining protein specificity and multiple alignment of binding sites. Proc Int Conf Intell Syst Mol Biol 1994 0.87
49 Probing information content of DNA-binding sites. Methods Enzymol 1991 0.85
50 Automated alignment of RNA sequences to pseudoknotted structures. Proc Int Conf Intell Syst Mol Biol 1997 0.85
51 Graph-theoretic approach to RNA modeling using comparative data. Proc Int Conf Intell Syst Mol Biol 1995 0.83
52 Xlandscape: the graphical display of word frequencies in sequences. Bioinformatics 1998 0.82
53 Finding common sequence and structure motifs in a set of RNA sequences. Proc Int Conf Intell Syst Mol Biol 1997 0.82
54 Quantitative DNA sequencing to determine the relative protein-DNA binding constants to multiple DNA sequences. Anal Biochem 1994 0.82
55 Multi-alphabet consensus algorithm for identification of low specificity protein-DNA interactions. Nucleic Acids Res 1995 0.80
56 Improved statistical methods reveal direct interactions between 16S and 23S rRNA. Nucleic Acids Res 2000 0.80
57 A mini-greedy algorithm for faster structural RNA stem-loop search. Genome Inform 2001 0.77