Published in J Clin Microbiol on December 01, 2002
Typing of methicillin-resistant Staphylococcus aureus in a university hospital setting by using novel software for spa repeat determination and database management. J Clin Microbiol (2003) 14.80
How clonal is Staphylococcus aureus? J Bacteriol (2003) 7.97
Development of a multilocus sequence typing scheme for characterization of clinical isolates of Acinetobacter baumannii. J Clin Microbiol (2005) 4.83
Methicillin-resistant Staphylococcus aureus ST398 in humans and animals, Central Europe. Emerg Infect Dis (2007) 4.04
Microarrays reveal that each of the ten dominant lineages of Staphylococcus aureus has a unique combination of surface-associated and regulatory genes. J Bacteriol (2006) 3.37
Natural population dynamics and expansion of pathogenic clones of Staphylococcus aureus. J Clin Invest (2004) 2.86
Comparison of multiple-locus variable-number tandem-repeat analysis with pulsed-field gel electrophoresis, spa typing, and multilocus sequence typing for clonal characterization of Staphylococcus aureus isolates. J Clin Microbiol (2005) 2.16
Tracking methicillin-resistant Staphylococcus aureus clones during a 5-year period (1998 to 2002) in a Spanish hospital. J Clin Microbiol (2004) 1.88
Comparison of multilocus sequence typing, pulsed-field gel electrophoresis, and antimicrobial susceptibility typing for characterization of Salmonella enterica serotype Newport isolates. J Clin Microbiol (2006) 1.78
Multilocus sequence typing of intercontinental bovine Staphylococcus aureus isolates. J Clin Microbiol (2005) 1.71
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Prevalence of ST9 methicillin-resistant Staphylococcus aureus among pigs and pig handlers in Malaysia. J Clin Microbiol (2009) 1.34
Origins and evolution of methicillin-resistant Staphylococcus aureus clonal lineages. Antimicrob Agents Chemother (2006) 1.34
Dissemination of community-acquired methicillin-resistant Staphylococcus aureus clones in northern Norway: sequence types 8 and 80 predominate. J Clin Microbiol (2005) 1.30
Multilocus sequence type system for the plant pathogen Xylella fastidiosa and relative contributions of recombination and point mutation to clonal diversity. Appl Environ Microbiol (2005) 1.29
Characterization of clonal relatedness among the natural population of Staphylococcus aureus strains by using spa sequence typing and the BURP (based upon repeat patterns) algorithm. J Clin Microbiol (2008) 1.26
Clinical and environmental isolates of Legionella pneumophila serogroup 1 cannot be distinguished by sequence analysis of two surface protein genes and three housekeeping genes. Appl Environ Microbiol (2005) 1.25
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Virulence genes and genotypic associations in nasal carriage, community-associated methicillin-susceptible and methicillin-resistant USA400 Staphylococcus aureus isolates. J Clin Microbiol (2010) 1.17
Molecular characterization of Staphylococcus aureus bloodstream isolates collected in a Dutch University Hospital between 1999 and 2006. J Clin Microbiol (2008) 1.12
Distribution of the serine-aspartate repeat protein-encoding sdr genes among nasal-carriage and invasive Staphylococcus aureus strains. J Clin Microbiol (2006) 1.04
DNA macroarray for identification and typing of Staphylococcus aureus isolates. J Clin Microbiol (2004) 1.02
Molecular typing and distribution of Staphylococcus aureus isolates in Eastern Canadian dairy herds. J Clin Microbiol (2004) 0.95
Clonal complexes and diversity of exotoxin gene profiles in methicillin-resistant and methicillin-susceptible Staphylococcus aureus isolates from patients in a Spanish hospital. J Clin Microbiol (2009) 0.95
Epidemiology and typing of Staphylococcus aureus strains isolated from bloodstream infections. J Clin Microbiol (2004) 0.94
High heterogeneity within methicillin-resistant Staphylococcus aureus ST398 isolates, defined by Cfr9I macrorestriction-pulsed-field gel electrophoresis profiles and spa and SCCmec types. Appl Environ Microbiol (2009) 0.93
Genetic relationship between methicillin-sensitive and methicillin-resistant Staphylococcus aureus strains from France and from international sources: delineation of genomic groups. J Clin Microbiol (2003) 0.92
Asymptomatic carriage of sequence type 398, spa type t571 methicillin-susceptible Staphylococcus aureus in an urban jail: a newly emerging, transmissible pathogenic strain. J Clin Microbiol (2013) 0.88
Multilocus sequence typing analysis of Staphylococcus lugdunensis implies a clonal population structure. J Clin Microbiol (2012) 0.83
Phenotypic and Genotypic Characterization of Staphylococcus aureus Strains from Italian Dairy Products. Int J Microbiol (2010) 0.81
Molecular characterisation of methicillin-susceptible and methicillin-resistant Staphylococcus aureus in inpatients and outpatients in Bosnia and Herzegovina. Wien Med Wochenschr (2012) 0.80
Diversification of clonal complex 5 methicillin-resistant Staphylococcus aureus strains (Rhine-Hesse clone) within Germany. J Clin Microbiol (2012) 0.80
Polymorphism, genetic exchange and intragenic recombination of the aureolysin gene among Staphylococcus aureus strains. BMC Microbiol (2008) 0.79
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Nottingham Staphylococcus aureus population study: prevalence of MRSA among elderly people in the community. BMJ (2002) 2.04
The evolutionary history of methicillin-resistant Staphylococcus aureus (MRSA). Proc Natl Acad Sci U S A (2002) 15.85
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Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance. Proc Natl Acad Sci U S A (2004) 8.95
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Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei. Proc Natl Acad Sci U S A (2004) 7.30
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Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak. N Engl J Med (2012) 6.36
Evolutionary models of the emergence of methicillin-resistant Staphylococcus aureus. Antimicrob Agents Chemother (2003) 5.29
Comparisons of dN/dS are time dependent for closely related bacterial genomes. J Theor Biol (2005) 5.20
EpiCollect: linking smartphones to web applications for epidemiology, ecology and community data collection. PLoS One (2009) 4.76
Characterization of encapsulated and noncapsulated Haemophilus influenzae and determination of phylogenetic relationships by multilocus sequence typing. J Clin Microbiol (2003) 4.47
Global distribution of Panton-Valentine leukocidin--positive methicillin-resistant Staphylococcus aureus, 2006. Emerg Infect Dis (2007) 3.98
Development of a multilocus sequence typing scheme for the opportunistic pathogen Pseudomonas aeruginosa. J Clin Microbiol (2004) 3.53
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Re-emergence of early pandemic Staphylococcus aureus as a community-acquired meticillin-resistant clone. Lancet (2005) 2.99
Seven novel variants of the staphylococcal chromosomal cassette mec in methicillin-resistant Staphylococcus aureus isolates from Ireland. Antimicrob Agents Chemother (2005) 2.87
MLST of housekeeping genes captures geographic population structure and suggests a European origin of Borrelia burgdorferi. Proc Natl Acad Sci U S A (2008) 2.67
A dominant clone of Leptospira interrogans associated with an outbreak of human leptospirosis in Thailand. PLoS Negl Trop Dis (2007) 2.65
A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic. Genome Res (2013) 2.59
Displaying the relatedness among isolates of bacterial species -- the eBURST approach. FEMS Microbiol Lett (2004) 2.56
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The role of the natural environment in the emergence of antibiotic resistance in gram-negative bacteria. Lancet Infect Dis (2013) 2.43
A population-based study of the incidence and molecular epidemiology of methicillin-resistant Staphylococcus aureus disease in San Francisco, 2004-2005. Clin Infect Dis (2008) 2.35
Nonrandom distribution of Burkholderia pseudomallei clones in relation to geographical location and virulence. J Clin Microbiol (2006) 2.34
Related clones containing SCCmec type IV predominate among clinically significant Staphylococcus epidermidis isolates. Antimicrob Agents Chemother (2003) 2.23
New trends in Staphylococcus aureus infections: glycopeptide resistance in hospital and methicillin resistance in the community. Curr Opin Infect Dis (2002) 2.17
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How many infections are caused by patient-to-patient transmission in intensive care units? Crit Care Med (2005) 1.87
Evaluation of molecular typing methods in characterizing a European collection of epidemic methicillin-resistant Staphylococcus aureus strains: the HARMONY collection. J Clin Microbiol (2007) 1.85
Vancomycin susceptibility within methicillin-resistant Staphylococcus aureus lineages. Emerg Infect Dis (2004) 1.84
Molecular tracing of the emergence, adaptation, and transmission of hospital-associated methicillin-resistant Staphylococcus aureus. Proc Natl Acad Sci U S A (2012) 1.83
Stability of serotypes during nasopharyngeal carriage of Streptococcus pneumoniae. J Clin Microbiol (2003) 1.78
Improved multilocus sequence typing scheme for Staphylococcus epidermidis. J Clin Microbiol (2006) 1.77
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Pseudomonas aeruginosa population structure revisited. PLoS One (2009) 1.68
Population biology of Gram-positive pathogens: high-risk clones for dissemination of antibiotic resistance. FEMS Microbiol Rev (2011) 1.66
Population structure of a hybrid clonal group of methicillin-resistant Staphylococcus aureus, ST239-MRSA-III. PLoS One (2010) 1.64
The secret life of the multilocus sequence type. Int J Antimicrob Agents (2007) 1.58
Genetic diversity and microevolution of Burkholderia pseudomallei in the environment. PLoS Negl Trop Dis (2008) 1.58
Impact of reduced vancomycin susceptibility on the therapeutic outcome of MRSA bloodstream infections. Ann Clin Microbiol Antimicrob (2007) 1.57
The carriage population of Staphylococcus aureus from Mali is composed of a combination of pandemic clones and the divergent Panton-Valentine leukocidin-positive genotype ST152. J Bacteriol (2008) 1.56
Burkholderia Pseudomallei is genetically diverse in agricultural land in Northeast Thailand. PLoS Negl Trop Dis (2009) 1.53
Risk factors for the transmission of methicillin-resistant Staphylococcus aureus in an adult intensive care unit: fitting a model to the data. J Infect Dis (2002) 1.53
A very early-branching Staphylococcus aureus lineage lacking the carotenoid pigment staphyloxanthin. Genome Biol Evol (2011) 1.51
A novel bactericidal fabric coating with potent in vitro activity against meticillin-resistant Staphylococcus aureus (MRSA). Int J Antimicrob Agents (2008) 1.48
Searching for species in haloarchaea. Proc Natl Acad Sci U S A (2007) 1.46
Detection of new methicillin-resistant Staphylococcus aureus clones containing the toxic shock syndrome toxin 1 gene responsible for hospital- and community-acquired infections in France. J Clin Microbiol (2006) 1.46
Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus. Genome Biol (2012) 1.45
High rates of recombination in otitis media isolates of non-typeable Haemophilus influenzae. Infect Genet Evol (2003) 1.45
The impact of recombination on dN/dS within recently emerged bacterial clones. PLoS Pathog (2011) 1.42
Similar compositional biases are caused by very different mutational effects. Genome Res (2006) 1.41
The phylogeny of Staphylococcus aureus - which genes make the best intra-species markers? Microbiology (2006) 1.38
Diversity of methicillin-resistant Staphylococcus aureus (MRSA) strains isolated from inpatients of 30 hospitals in Orange County, California. PLoS One (2013) 1.37
The temporal dynamics of slightly deleterious mutations in Escherichia coli and Shigella spp. Mol Biol Evol (2008) 1.35
Genetic background affects stability of mecA in Staphylococcus aureus. J Clin Microbiol (2005) 1.33
Influence of recombination and niche separation on the population genetic structure of the pathogen Streptococcus pyogenes. Infect Immun (2002) 1.31
Spatial effects of mosquito bednets on child mortality. BMC Public Health (2008) 1.31
Importation of multidrug-resistant Acinetobacter spp infections with casualties from Iraq. Lancet Infect Dis (2006) 1.31
Determinants of late disease-stage presentation at diagnosis of HIV infection in Venezuela: a case-case comparison. AIDS Res Ther (2008) 1.30
Mutational patterns cannot explain genome composition: Are there any neutral sites in the genomes of bacteria? PLoS Genet (2010) 1.30
Multi-locus sequence typing of Bartonella henselae isolates from three continents reveals hypervirulent and feline-associated clones. PLoS One (2007) 1.30
How diverse is the genus Wolbachia? Multiple-gene sequencing reveals a putatively new Wolbachia supergroup recovered from spider mites (Acari: Tetranychidae). Appl Environ Microbiol (2008) 1.29
Comparisons between geographically diverse samples of carried Staphylococcus aureus. J Bacteriol (2009) 1.29
Molecular genetic typing reveals further insights into the diversity of animal-associated Staphylococcus aureus. J Med Microbiol (2009) 1.29
Burkholderia pseudomallei genome plasticity associated with genomic island variation. BMC Genomics (2008) 1.28
Emergence of a virulent clade of Vibrio vulnificus and correlation with the presence of a 33-kilobase genomic island. Appl Environ Microbiol (2007) 1.27
Nematode symbiont for Photorhabdus asymbiotica. Emerg Infect Dis (2006) 1.26
Evolutionary genetics of the accessory gene regulator (agr) locus in Staphylococcus aureus. J Bacteriol (2005) 1.26
S. aureus IgG-binding proteins SpA and Sbi: host specificity and mechanisms of immune complex formation. Mol Immunol (2007) 1.25
Predicting the virulence of MRSA from its genome sequence. Genome Res (2014) 1.23
Genomic acquisition of a capsular polysaccharide virulence cluster by non-pathogenic Burkholderia isolates. Genome Biol (2010) 1.22
DNA damage signaling triggers degradation of histone methyltransferases through APC/C(Cdh1) in senescent cells. Mol Cell (2011) 1.21
Role of serum vascular endothelial growth factor in the prediction of angiogenesis and prognosis for non-small cell lung cancer. Lung (2005) 1.20
Biogeography and virulence of Staphylococcus aureus. PLoS One (2009) 1.19
A single multilocus sequence typing (MLST) scheme for seven pathogenic Leptospira species. PLoS Negl Trop Dis (2013) 1.17
Bacteriophage therapy: potential uses in the control of antibiotic-resistant pathogens. Expert Rev Anti Infect Ther (2011) 1.16
ama1 genes of sympatric Plasmodium vivax and P. falciparum from Venezuela differ significantly in genetic diversity and recombination frequency. PLoS One (2008) 1.13
Multilocus sequence typing of Staphylococcus aureus with DNA array technology. J Clin Microbiol (2003) 1.13
Diversity of methicillin-resistant Staphylococcus aureus strains isolated from residents of 26 nursing homes in Orange County, California. J Clin Microbiol (2013) 1.12
The persistence of parasitic plasmids. Genetics (2007) 1.11
Multi-locus sequence typing of a geographically and temporally diverse sample of the highly clonal human pathogen Bartonella quintana. PLoS One (2010) 1.07
Amoebae promote persistence of epidemic strains of MRSA. Environ Microbiol (2006) 1.06
High sequence diversity and evidence of balancing selection in the Pvmsp3alpha gene of Plasmodium vivax in the Venezuelan Amazon. Mol Biochem Parasitol (2005) 1.06
Large-scale comparative genomic ranking of taxonomically restricted genes (TRGs) in bacterial and archaeal genomes. PLoS One (2007) 1.04
Host migration impacts on the phylogeography of Lyme Borreliosis spirochaete species in Europe. Environ Microbiol (2010) 1.03
From genotype to phenotype: can systems biology be used to predict Staphylococcus aureus virulence? Nat Rev Microbiol (2012) 1.03
High rates of homologous recombination in the mite endosymbiont and opportunistic human pathogen Orientia tsutsugamushi. PLoS Negl Trop Dis (2010) 1.03
The role of regulated clinical trials in the development of bacteriophage therapeutics. J Mol Genet Med (2012) 1.01
Genetic relationships of Vibrio parahaemolyticus isolates from clinical, human carrier, and environmental sources in Thailand, determined by multilocus sequence analysis. Appl Environ Microbiol (2013) 0.99
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Fine-scale phylogeographic structure of Borrelia lusitaniae revealed by multilocus sequence typing. PLoS One (2008) 0.98