PubRank

Richard H Scheuermann

Author PubWeight™ 119.46‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat Biotechnol 2007 35.41
2 Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project. Nat Biotechnol 2008 12.96
3 Pre-existing immunity against swine-origin H1N1 influenza viruses in the general human population. Proc Natl Acad Sci U S A 2009 4.47
4 MIFlowCyt: the minimum information about a Flow Cytometry Experiment. Cytometry A 2008 3.33
5 Critical assessment of automated flow cytometry data analysis techniques. Nat Methods 2013 3.30
6 BioHealthBase: informatics support in the elucidation of influenza virus host pathogen interactions and virulence. Nucleic Acids Res 2007 3.28
7 Influenza research database: an integrated bioinformatics resource for influenza research and surveillance. Influenza Other Respir Viruses 2012 3.04
8 National Institute of Allergy and Infectious Diseases bioinformatics resource centers: new assets for pathogen informatics. Infect Immun 2007 3.02
9 Modular organization of protein interaction networks. Bioinformatics 2006 2.68
10 ViPR: an open bioinformatics database and analysis resource for virology research. Nucleic Acids Res 2011 2.44
11 Elucidation of seventeen human peripheral blood B-cell subsets and quantification of the tetanus response using a density-based method for the automated identification of cell populations in multidimensional flow cytometry data. Cytometry B Clin Cytom 2010 2.38
12 Synergies and distinctions between computational disciplines in biomedical research: perspective from the Clinical andTranslational Science Award programs. Acad Med 2009 2.25
13 Presence of simian virus 40 DNA sequences in human lymphomas. Lancet 2002 2.21
14 Overview of the Alliance for Cellular Signaling. Nature 2002 2.15
15 Components of the antigen processing and presentation pathway revealed by gene expression microarray analysis following B cell antigen receptor (BCR) stimulation. BMC Bioinformatics 2006 2.09
16 Ontology development for biological systems: immunology. Bioinformatics 2007 2.03
17 Technical and policy approaches to balancing patient privacy and data sharing in clinical and translational research. J Investig Med 2010 1.86
18 Development and evaluation of a study design typology for human research. AMIA Annu Symp Proc 2009 1.70
19 The human studies database project: federating human studies design data using the ontology of clinical research. AMIA Jt Summits Transl Sci Proc 2010 1.58
20 An improved ontological representation of dendritic cells as a paradigm for all cell types. BMC Bioinformatics 2009 1.56
21 Hematopoietic cell types: prototype for a revised cell ontology. J Biomed Inform 2010 1.48
22 A distribution free summarization method for Affymetrix GeneChip arrays. Bioinformatics 2006 1.46
23 Analysis of the major patterns of B cell gene expression changes in response to short-term stimulation with 33 single ligands. J Immunol 2004 1.39
24 Complete genomic characterization of a pathogenic A.II strain of Francisella tularensis subspecies tularensis. PLoS One 2007 1.31
25 Novel sequence feature variant type analysis of the HLA genetic association in systemic sclerosis. Hum Mol Genet 2009 1.10
26 Complete genome sequence of Francisella tularensis subspecies holarctica FTNF002-00. PLoS One 2009 1.09
27 Influenza virus sequence feature variant type analysis: evidence of a role for NS1 in influenza virus host range restriction. J Virol 2012 1.02
28 Virus pathogen database and analysis resource (ViPR): a comprehensive bioinformatics database and analysis resource for the coronavirus research community. Viruses 2012 1.01
29 Development of real-time PCR assays for the quantitative detection of Epstein-Barr virus and cytomegalovirus, comparison of TaqMan probes, and molecular beacons. J Mol Diagn 2003 1.00
30 Toward an ontology-based framework for clinical research databases. J Biomed Inform 2010 0.99
31 Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop. Viruses 2010 0.97
32 Core and periphery structures in protein interaction networks. BMC Bioinformatics 2009 0.97
33 A Distribution-Free Convolution Model for background correction of oligonucleotide microarray data. BMC Genomics 2009 0.95
34 GO-Bayes: Gene Ontology-based overrepresentation analysis using a Bayesian approach. Bioinformatics 2010 0.93
35 GenePattern flow cytometry suite. Source Code Biol Med 2013 0.93
36 Sequence feature variant type (SFVT) analysis of the HLA genetic association in juvenile idiopathic arthritis. Pac Symp Biocomput 2010 0.91
37 Nucleic acid testing for viral burden and viral genotyping. Clin Chim Acta 2005 0.90
38 A machine learning approach for identifying anatomical locations of actionable findings in radiology reports. AMIA Annu Symp Proc 2012 0.86
39 Activation of the Syk tyrosine kinase is insufficient for downstream signal transduction in B lymphocytes. BMC Immunol 2002 0.84
40 A gene selection method for GeneChip array data with small sample sizes. BMC Genomics 2011 0.83
41 Identifying Differentially Expressed Genes based on probe level data for GeneChip arrays. Int J Comput Biol Drug Des 2011 0.81
42 Ontologies for clinical and translational research: Introduction. J Biomed Inform 2011 0.79
43 A novel colonic repressor element regulates intestinal gene expression by interacting with Cux/CDP. Mol Cell Biol 2002 0.79
44 Deterministic graph-theoretic algorithm for detecting modules in biological interaction networks. Int J Bioinform Res Appl 2010 0.78
45 Keeping raw data in context. Science 2009 0.78
46 FuGEFlow: data model and markup language for flow cytometry. BMC Bioinformatics 2009 0.77
47 Minimum Information about a Genotyping Experiment (MIGEN). Stand Genomic Sci 2011 0.76
48 PRODUCTION OF A PRELIMINARY QUALITY CONTROL PIPELINE FOR SINGLE NUCLEI RNA-SEQ AND ITS APPLICATION IN THE ANALYSIS OF CELL TYPE DIVERSITY OF POST-MORTEM HUMAN BRAIN NEOCORTEX. Pac Symp Biocomput 2016 0.75
49 Extracting actionable findings of appendicitis from radiology reports using natural language processing. AMIA Jt Summits Transl Sci Proc 2013 0.75