Published in J Biomol NMR on January 01, 2003
Characterization of the fast dynamics of protein amino acid side chains using NMR relaxation in solution. Chem Rev (2006) 2.72
Dynamic dysfunction in dihydrofolate reductase results from antifolate drug binding: modulation of dynamics within a structural state. Structure (2009) 2.13
Hidden dynamic allostery in a PDZ domain. Proc Natl Acad Sci U S A (2009) 1.93
Optimisation of NMR dynamic models I. Minimisation algorithms and their performance within the model-free and Brownian rotational diffusion spaces. J Biomol NMR (2007) 1.52
Model-free analysis of protein dynamics: assessment of accuracy and model selection protocols based on molecular dynamics simulation. J Biomol NMR (2004) 1.32
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Model-free model elimination: a new step in the model-free dynamic analysis of NMR relaxation data. J Biomol NMR (2006) 1.16
Structural and functional consequences of the cardiac troponin C L48Q Ca(2+)-sensitizing mutation. Biochemistry (2012) 1.11
Monitoring aromatic picosecond to nanosecond dynamics in proteins via 13C relaxation: expanding perturbation mapping of the rigidifying core mutation, V54A, in eglin c. Biochemistry (2008) 1.10
Intrinsic domain and loop dynamics commensurate with catalytic turnover in an induced-fit enzyme. Structure (2009) 1.09
Using NMR to study fast dynamics in proteins: methods and applications. Curr Opin Pharmacol (2010) 1.09
NMR and MD studies of the temperature-dependent dynamics of RNA YNMG-tetraloops. Nucleic Acids Res (2008) 1.07
A distal mutation perturbs dynamic amino acid networks in dihydrofolate reductase. Biochemistry (2013) 1.06
NMR insights into protein allostery. Arch Biochem Biophys (2011) 1.02
Automated NMR relaxation dispersion data analysis using NESSY. BMC Bioinformatics (2011) 1.02
Cytosine ribose flexibility in DNA: a combined NMR 13C spin relaxation and molecular dynamics simulation study. Nucleic Acids Res (2008) 0.99
Global changes in local protein dynamics reduce the entropic cost of carbohydrate binding in the arabinose-binding protein. J Mol Biol (2007) 0.98
Prion proteins with pathogenic and protective mutations show similar structure and dynamics. Biochemistry (2009) 0.97
A suite of Mathematica notebooks for the analysis of protein main chain 15N NMR relaxation data. J Biomol NMR (2006) 0.97
relaxGUI: a new software for fast and simple NMR relaxation data analysis and calculation of ps-ns and μs motion of proteins. J Biomol NMR (2011) 0.97
A variable light domain fluorogen activating protein homodimerizes to activate dimethylindole red. Biochemistry (2012) 0.95
Temperature-dependent spectral density analysis applied to monitoring backbone dynamics of major urinary protein-I complexed with the pheromone 2- sec-butyl-4,5-dihydrothiazole. J Biomol NMR (2004) 0.95
Dynamics of a truncated prion protein, PrP(113-231), from (15)N NMR relaxation: order parameters calculated and slow conformational fluctuations localized to a distinct region. Protein Sci (2009) 0.89
Deriving quantitative dynamics information for proteins and RNAs using ROTDIF with a graphical user interface. J Biomol NMR (2013) 0.88
Nuclear magnetic resonance study of the role of M42 in the solution dynamics of Escherichia coli dihydrofolate reductase. Biochemistry (2010) 0.88
Solution structure of polymerase mu's BRCT Domain reveals an element essential for its role in nonhomologous end joining. Biochemistry (2007) 0.87
Solution NMR Spectroscopy for the Study of Enzyme Allostery. Chem Rev (2016) 0.87
Changes in conformational dynamics of basic side chains upon protein-DNA association. Nucleic Acids Res (2016) 0.87
Colocalization of fast and slow timescale dynamics in the allosteric signaling protein CheY. J Mol Biol (2013) 0.86
relax: the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data. Bioinformatics (2014) 0.86
Backbone dynamics in an intramolecular prolylpeptide-SH3 complex from the diphtheria toxin repressor, DtxR. J Mol Biol (2007) 0.84
Quantifying Lipari-Szabo modelfree parameters from 13CO NMR relaxation experiments. J Biomol NMR (2006) 0.83
PhosphoThr peptide binding globally rigidifies much of the FHA domain from Arabidopsis receptor kinase-associated protein phosphatase. Biochemistry (2005) 0.83
Mesodynamics in the SARS nucleocapsid measured by NMR field cycling. J Biomol NMR (2009) 0.83
Apparent tradeoff of higher activity in MMP-12 for enhanced stability and flexibility in MMP-3. Biophys J (2010) 0.83
Structural and motional contributions of the Bacillus subtilis ClpC N-domain to adaptor protein interactions. J Mol Biol (2009) 0.82
Structural characterization of the interactions between palladin and α-actinin. J Mol Biol (2011) 0.81
RNA phosphodiester backbone dynamics of a perdeuterated cUUCGg tetraloop RNA from phosphorus-31 NMR relaxation analysis. J Biomol NMR (2009) 0.81
Time-averaged order parameter restraints in molecular dynamics simulations. J Biomol NMR (2014) 0.81
Side Chain Conformational Distributions of a Small Protein Derived from Model-Free Analysis of a Large Set of Residual Dipolar Couplings. J Am Chem Soc (2015) 0.81
Model-free analysis for large proteins at high magnetic field strengths. J Biomol NMR (2007) 0.80
Simple tests for the validation of multiple field spin relaxation data. J Biomol NMR (2009) 0.80
TEM-1 backbone dynamics-insights from combined molecular dynamics and nuclear magnetic resonance. Biophys J (2010) 0.80
Conserved nucleotides in an RNA essential for hepatitis B virus replication show distinct mobility patterns. Nucleic Acids Res (2007) 0.80
Synergistic applications of MD and NMR for the study of biological systems. J Biomed Biotechnol (2012) 0.79
Investigating the dynamic aspects of drug-protein recognition through a combination of MD and NMR analyses: implications for the development of protein-protein interaction inhibitors. PLoS One (2014) 0.79
Chimeric β-lactamases: global conservation of parental function and fast time-scale dynamics with increased slow motions. PLoS One (2012) 0.79
Ligand-induced changes in the structure and dynamics of Escherichia coli peptide deformylase. Biochemistry (2009) 0.79
Protein-Inhibitor Interaction Studies Using NMR. Appl NMR Spectrosc (2015) 0.78
The structural and functional effects of the familial hypertrophic cardiomyopathy-linked cardiac troponin C mutation, L29Q. J Mol Cell Cardiol (2015) 0.78
A probe to monitor performance of ¹⁵N longitudinal relaxation experiments for proteins in solution. J Biomol NMR (2014) 0.78
Dynamics of GCN4 facilitate DNA interaction: a model-free analysis of an intrinsically disordered region. Phys Chem Chem Phys (2016) 0.76
NMRDyn: a program for NMR relaxation studies of protein association. PLoS One (2008) 0.75
Ligand-induced protein mobility in complexes of carbonic anhydrase II and benzenesulfonamides with oligoglycine chains. PLoS One (2013) 0.75
Solution Structure of Domain 1.1 of the σ(A) Factor from Bacillus subtilis is Preformed for Binding to the RNA Polymerase Core. J Biol Chem (2017) 0.75
Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation. Biochemistry (1994) 13.94
Backbone dynamics of Escherichia coli ribonuclease HI: correlations with structure and function in an active enzyme. J Mol Biol (1995) 5.58
An Introduction to Model Selection. J Math Psychol (2000) 1.54
A structural mode-coupling approach to 15N NMR relaxation in proteins. J Am Chem Soc (2001) 1.48
Anisotropic rotational diffusion in model-free analysis for a ternary DHFR complex. J Biomol NMR (2001) 1.12
Model-free approach beyond the borders of its applicability. J Magn Reson (1997) 1.09
Propagation of experimental uncertainties using the Lipari-Szabo model-free analysis of protein dynamics. J Biomol NMR (1998) 1.03
An improved method for distinguishing between anisotropic tumbling and chemical exchange in analysis of 15N relaxation parameters. J Biomol NMR (2001) 1.02
Estimation of dynamic parameters from NMR relaxation data using the Lipari-Szabo model-free approach and Bayesian statistical methods. J Magn Reson (1999) 0.85
A Bayesian statistical method for the detection and quantification of rotational diffusion anisotropy from NMR relaxation data. J Magn Reson (2000) 0.80
Thienopyridone drugs are selective activators of AMP-activated protein kinase beta1-containing complexes. Chem Biol (2008) 1.93
Optimisation of NMR dynamic models I. Minimisation algorithms and their performance within the model-free and Brownian rotational diffusion spaces. J Biomol NMR (2007) 1.52
Convergent evolution of receptors for protein import into mitochondria. Curr Biol (2006) 1.32
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Model-free model elimination: a new step in the model-free dynamic analysis of NMR relaxation data. J Biomol NMR (2006) 1.16
Membrane receptors: structure and function of the relaxin family peptide receptors. Mol Cell Endocrinol (2010) 1.14
The transmembrane segment of Tom20 is recognized by Mim1 for docking to the mitochondrial TOM complex. J Mol Biol (2007) 1.08
A dynamic pharmacophore drives the interaction between Psalmotoxin-1 and the putative drug target acid-sensing ion channel 1a. Mol Pharmacol (2011) 1.05
Macromolecular NMR spectroscopy for the non-spectroscopist. FEBS J (2011) 1.04
The structure of Ap(4)A hydrolase complexed with ATP-MgF(x) reveals the basis of substrate binding. Structure (2002) 1.03
Automated NMR relaxation dispersion data analysis using NESSY. BMC Bioinformatics (2011) 1.02
The structure and interactions of human apolipoprotein C-II in dodecyl phosphocholine. Biochemistry (2004) 0.99
Patterns that define the four domains conserved in known and novel isoforms of the protein import receptor Tom20. J Mol Biol (2005) 0.98
relaxGUI: a new software for fast and simple NMR relaxation data analysis and calculation of ps-ns and μs motion of proteins. J Biomol NMR (2011) 0.97
Increased d-lactic Acid intestinal bacteria in patients with chronic fatigue syndrome. In Vivo (2009) 0.96
Oligosaccharide recognition and binding to the carbohydrate binding module of AMP-activated protein kinase. FEBS Lett (2007) 0.95
The NMR solution structure of the relaxin (RXFP1) receptor lipoprotein receptor class A module and identification of key residues in the N-terminal region of the module that mediate receptor activation. J Biol Chem (2006) 0.94
Set theory formulation of the model-free problem and the diffusion seeded model-free paradigm. Mol Biosyst (2007) 0.94
Structure, topology and function of the translocase of the outer membrane of mitochondria. Plant Physiol Biochem (2008) 0.92
Recognition of mitochondrial targeting sequences by the import receptors Tom20 and Tom22. J Mol Biol (2010) 0.92
A structural model for apolipoprotein C-II amyloid fibrils: experimental characterization and molecular dynamics simulations. J Mol Biol (2010) 0.91
A structural core within apolipoprotein C-II amyloid fibrils identified using hydrogen exchange and proteolysis. J Mol Biol (2006) 0.91
Structural characterization of the N-terminal autoregulatory sequence of phenylalanine hydroxylase. Protein Sci (2002) 0.91
AMPK beta subunits display isoform specific affinities for carbohydrates. FEBS Lett (2010) 0.90
Macromolecular NMR spectroscopy for the non-spectroscopist: beyond macromolecular solution structure determination. FEBS J (2011) 0.89
Structure and substrate-binding mechanism of human Ap4A hydrolase. J Biol Chem (2004) 0.89
Membrane protein SMP-1 is required for normal flagellum function in Leishmania. J Cell Sci (2010) 0.87
The relaxin receptor (RXFP1) utilizes hydrophobic moieties on a signaling surface of its N-terminal low density lipoprotein class A module to mediate receptor activation. J Biol Chem (2013) 0.86
Single fiber analyses of glycogen-related proteins reveal their differential association with glycogen in rat skeletal muscle. Am J Physiol Cell Physiol (2012) 0.85
Recognition and detoxification of the insecticide DDT by Drosophila melanogaster glutathione S-transferase D1. J Mol Biol (2010) 0.85
Probing the flexibility of the DsbA oxidoreductase from Vibrio cholerae--a 15N - 1H heteronuclear NMR relaxation analysis of oxidized and reduced forms of DsbA. J Mol Biol (2007) 0.84
High-level expression of a soluble and functional fibronectin type II domain from MMP-2 in the Escherichia coli cytoplasm for solution NMR studies. Protein Expr Purif (2006) 0.83
SnRK1 from Arabidopsis thaliana is an atypical AMPK. Plant J (2015) 0.83
Chimeric RXFP1 and RXFP2 Receptors Highlight the Similar Mechanism of Activation Utilizing Their N-Terminal Low-Density Lipoprotein Class A Modules. Front Endocrinol (Lausanne) (2013) 0.83
A statistical approach to the interpretation of molecular dynamics simulations of calmodulin equilibrium dynamics. Protein Sci (2005) 0.82
A high-resolution solution structure of a trypanosomatid FYVE domain. Protein Sci (2007) 0.81
Validating the use of database potentials in protein structure determination by NMR. FEBS Lett (2005) 0.81
Elucidation of relaxin-3 binding interactions in the extracellular loops of RXFP3. Front Endocrinol (Lausanne) (2013) 0.81
Dynamics of Ca2+-saturated calmodulin D129N mutant studied by multiple molecular dynamics simulations. Protein Sci (2003) 0.80
A sample preparation protocol for 1H nuclear magnetic resonance studies of water-soluble metabolites in blood and urine. Anal Biochem (2009) 0.80
Acylation-dependent and-independent membrane targeting and distinct functions of small myristoylated proteins (SMPs) in Leishmania major. Int J Parasitol (2012) 0.80
The human LGR7 low-density lipoprotein class A module requires calcium for structure. Ann N Y Acad Sci (2005) 0.80
NMR metabolic profiling of serum identifies amino acid disturbances in chronic fatigue syndrome. Clin Chim Acta (2012) 0.80
Mapping key regions of the RXFP2 low-density lipoprotein class-A module that are involved in signal activation. Biochemistry (2014) 0.79
Metabolism in chronic fatigue syndrome. Adv Clin Chem (2014) 0.79
AMP-activated protein kinase β-subunit requires internal motion for optimal carbohydrate binding. Biophys J (2012) 0.79
A cyclic peptide inhibitor of apoC-II peptide fibril formation: mechanistic insight from NMR and molecular dynamics analysis. J Mol Biol (2012) 0.79
Development of a scaffold displaying exoloops of RXFP1. Ital J Anat Embryol (2013) 0.79
Backbone resonance assignment of the 2H, 13C, 15N labelled 32kDa central domain of Escherichia coli TyrR. J Biomol NMR (2002) 0.77
(1)H-NMR analysis of the human urinary metabolome in response to an 18-month multi-component exercise program and calcium-vitamin-D3 supplementation in older men. Appl Physiol Nutr Metab (2014) 0.77
Discovery of inhibitors of lupin diadenosine 5',5'''-P(1),P(4)-tetraphosphate hydrolase by virtual screening. Biochemistry (2009) 0.76
Charge and charge-pair mutations alter the rate of assembly and structural properties of apolipoprotein C-II amyloid fibrils. Biochemistry (2015) 0.75
Membrane targeting of the small myristoylated protein 2 (SMP-2) in Leishmania major. Mol Biochem Parasitol (2013) 0.75
Identification and characterization of bi-thiazole-2,2'-diamines as kinase inhibitory scaffolds. Biochim Biophys Acta (2013) 0.75
Recombinant RXFP1-LDL-A module does not form dimers. Ital J Anat Embryol (2013) 0.75
Cell-free protein synthesis as a tool to study RXFP3-relaxin-3 protein interactions. Ital J Anat Embryol (2013) 0.75
1H, 13C and 15N resonance assignments of the cytosolic domain of Tom20 from Arabidopsis thaliana. J Biomol NMR (2005) 0.75
1H, 13C, and 15N resonance assignments of the 17 kDa Ap4A hydrolase from Homo sapiens in the presence and absence of ATP. J Biomol NMR (2005) 0.75