Published in J Clin Microbiol on April 01, 2003
Evaluation and strategy for use of MIRU-VNTRplus, a multifunctional database for online analysis of genotyping data and phylogenetic identification of Mycobacterium tuberculosis complex isolates. J Clin Microbiol (2008) 3.94
Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis. BMC Microbiol (2004) 2.39
Variable number of tandem repeats in Salmonella enterica subsp. enterica for typing purposes. J Clin Microbiol (2004) 2.05
Comparison of multiple-locus variable-number tandem repeat analysis, pulsed-field gel electrophoresis, and phage typing for subtype analysis of Salmonella enterica serotype Enteritidis. J Clin Microbiol (2006) 1.85
Clonal expansion and microevolution of quinolone-resistant Salmonella enterica serotype typhi in Vietnam from 1996 to 2004. J Clin Microbiol (2007) 1.84
Multilocus short sequence repeat sequencing approach for differentiating among Mycobacterium avium subsp. paratuberculosis strains. J Clin Microbiol (2004) 1.78
CRISPR typing and subtyping for improved laboratory surveillance of Salmonella infections. PLoS One (2012) 1.68
Tandem repeat analysis for surveillance of human Salmonella Typhimurium infections. Emerg Infect Dis (2007) 1.62
Methodologies for Salmonella enterica subsp. enterica subtyping: gold standards and alternatives. Appl Environ Microbiol (2011) 1.61
Novel virulence gene and clustered regularly interspaced short palindromic repeat (CRISPR) multilocus sequence typing scheme for subtyping of the major serovars of Salmonella enterica subsp. enterica. Appl Environ Microbiol (2011) 1.51
Use of variable-number tandem repeats to examine genetic diversity of Neisseria meningitidis. J Clin Microbiol (2005) 1.44
Locus-specific mutational events in a multilocus variable-number tandem repeat analysis of Escherichia coli O157:H7. J Clin Microbiol (2006) 1.38
Stability of multiple-locus variable-number tandem repeats in Salmonella enterica serovar typhimurium. J Clin Microbiol (2007) 1.36
Multi-locus variable-number tandem repeat analysis for outbreak studies of Salmonella enterica serotype Enteritidis. BMC Microbiol (2008) 1.33
DNA fingerprinting of Shiga-toxin producing Escherichia coli O157 based on Multiple-Locus Variable-Number Tandem-Repeats Analysis (MLVA). Ann Clin Microbiol Antimicrob (2003) 1.33
Multiple-locus variable-number tandem-repeat analysis of Salmonella enterica serovar Typhi. J Clin Microbiol (2009) 1.29
Multiple-locus variable-number tandem repeat analysis of Salmonella Enteritidis isolates from human and non-human sources using a single multiplex PCR. FEMS Microbiol Lett (2007) 1.17
Molecular epidemiology of Salmonella enterica serovar typhimurium isolates from cattle in hokkaido, Japan: evidence of clonal replacement and characterization of the disseminated clone. Appl Environ Microbiol (2011) 1.06
Multilocus variable-number tandem-repeat method for typing Salmonella enterica serovar Newport. J Clin Microbiol (2009) 1.01
Differentiation of "Candidatus Liberibacter asiaticus" isolates by variable-number tandem-repeat analysis. Appl Environ Microbiol (2011) 1.01
A beef-associated outbreak of Salmonella Typhimurium DT104 in The Netherlands with implications for national and international policy. Epidemiol Infect (2007) 1.00
Impact of compounding error on strategies for subtyping pathogenic bacteria. Foodborne Pathog Dis (2008) 0.98
VNTRDB: a bacterial variable number tandem repeat locus database. Nucleic Acids Res (2006) 0.97
Variable-number tandem repeats that are useful in genotyping isolates of Salmonella enterica subsp. enterica serovars Typhimurium and Newport. J Clin Microbiol (2006) 0.97
MLVA as a tool for public health surveillance of human Salmonella Typhimurium: prospective study in Belgium and evaluation of MLVA loci stability. PLoS One (2013) 0.95
The prevalence of multidrug resistance is higher among bovine than human Salmonella enterica serotype Newport, Typhimurium, and 4,5,12:i:- isolates in the United States but differs by serotype and geographic region. Appl Environ Microbiol (2010) 0.91
Multilocus variable number tandem repeat analysis for Salmonella enterica subspecies. Eur J Clin Microbiol Infect Dis (2010) 0.90
Alignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains. PLoS One (2012) 0.89
Subtyping of a large collection of historical Listeria monocytogenes strains from Ontario, Canada, by an improved multilocus variable-number tandem-repeat analysis (MLVA). Appl Environ Microbiol (2013) 0.89
CRISPR-MVLST subtyping of Salmonella enterica subsp. enterica serovars Typhimurium and Heidelberg and application in identifying outbreak isolates. BMC Microbiol (2013) 0.87
Genetic and phenotypic variability among Salmonella enterica serovar Typhimurium isolates from California dairy cattle and humans. Appl Environ Microbiol (2006) 0.87
Allele distribution and genetic diversity of VNTR loci in Salmonella enterica serotype Enteritidis isolates from different sources. BMC Microbiol (2008) 0.86
High-throughput analysis of the satellitome illuminates satellite DNA evolution. Sci Rep (2016) 0.86
Analysis of Salmonella enterica serovar Typhimurium variable-number tandem-repeat data for public health investigation based on measured mutation rates and whole-genome sequence comparisons. J Bacteriol (2014) 0.85
MLVA and phage typing as complementary tools in the epidemiological investigation of Salmonella enterica serovar Typhimurium clusters. Curr Microbiol (2010) 0.84
Potential Sources and Transmission of Salmonella and Antimicrobial Resistance in Kampala, Uganda. PLoS One (2016) 0.83
A new methodology for differentiation and typing of closely related Salmonella enterica serovar Heidelberg isolates. Curr Microbiol (2012) 0.82
DNA microarray analysis of Salmonella serotype Typhimurium strains causing different symptoms of disease. BMC Microbiol (2010) 0.80
Multilocus variable-number tandem-repeat analysis and plasmid profiling to study the occurrence of blaCMY-2 within a pulsed-field gel electrophoresis-defined clade of Salmonella enterica serovar Typhimurium. Appl Environ Microbiol (2009) 0.80
Evaluation of molecular typing of foodborne pathogens in European reference laboratories from 2012 to 2013. Euro Surveill (2016) 0.79
MLVA polymorphism of Salmonella enterica subspecies isolated from humans, animals, and food in Cambodia. BMC Res Notes (2011) 0.78
Improved identification of epidemiologically related strains of Salmonella enterica by use of a fusion algorithm based on pulsed-field gel electrophoresis and multiple-locus variable-number tandem-repeat analysis. J Clin Microbiol (2010) 0.76
Development and validation of a single-tube multiple-locus variable number tandem repeat analysis for Klebsiella pneumoniae. PLoS One (2014) 0.76
MLVA for Salmonella enterica subsp. enterica Serovar Dublin: Development of a Method Suitable for Inter-Laboratory Surveillance and Application in the Context of a Raw Milk Cheese Outbreak in France in 2012. Front Microbiol (2017) 0.75
Salmonella in Wild Birds Utilizing Protected and Human Impacted Habitats, Uganda. Ecohealth (2016) 0.75
External quality assessment for molecular typing of Salmonella 2013-2015: performance of the European national public health reference laboratories. Eur J Clin Microbiol Infect Dis (2017) 0.75
Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res (1999) 49.21
AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res (1995) 45.26
Food-related illness and death in the United States. Emerg Infect Dis (1999) 39.22
Hypervariable 'minisatellite' regions in human DNA. Nature (1985) 31.03
Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature (2001) 16.89
Multiple-locus variable-number tandem repeat analysis reveals genetic relationships within Bacillus anthracis. J Bacteriol (2000) 15.34
PCR mapping of integrons reveals several novel combinations of resistance genes. Antimicrob Agents Chemother (1995) 12.54
Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats. Microbiology (1998) 11.37
Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units. J Clin Microbiol (2001) 9.80
Spontaneous mutation rates to new length alleles at tandem-repetitive hypervariable loci in human DNA. Nature (1988) 9.47
Emergence of multidrug-resistant Salmonella enterica serotype typhimurium DT104 infections in the United States. N Engl J Med (1998) 9.28
Variable human minisatellite-like regions in the Mycobacterium tuberculosis genome. Mol Microbiol (2000) 8.10
Genetic variability of Bacillus anthracis and related species. J Clin Microbiol (1995) 4.26
Identification and characterization of variable-number tandem repeats in the Yersinia pestis genome. J Clin Microbiol (2001) 4.08
Identification of a region of genetic variability among Bacillus anthracis strains and related species. J Bacteriol (1996) 3.92
A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis. BMC Microbiol (2001) 3.83
Characterization of the variable-number tandem repeats in vrrA from different Bacillus anthracis isolates. Appl Environ Microbiol (1997) 3.36
Excess mortality associated with antimicrobial drug-resistant Salmonella typhimurium. Emerg Infect Dis (2002) 3.32
Discrimination of Mycobacterium tuberculosis complex bacteria using novel VNTR-PCR targets. Microbiology (2002) 3.26
Bacillus anthracis diversity in Kruger National Park. J Clin Microbiol (2000) 3.16
Diversity in a variable-number tandem repeat from Yersinia pestis. J Clin Microbiol (2000) 3.03
Variable number of tandem repeats in clinical strains of Haemophilus influenzae. Infect Immun (1997) 2.92
Variable assortment of prophages provides a transferable repertoire of pathogenic determinants in Salmonella. Mol Microbiol (2001) 2.63
Epidemic salmonella typhimurium DT 104--a truly international multiresistant clone. J Antimicrob Chemother (2000) 2.47
Salmonella enterica serotype Typhimurium DT104 isolated from humans, United States, 1985, 1990, and 1995. Emerg Infect Dis (2002) 2.19
Tissue-specific gene expression identifies a gene in the lysogenic phage Gifsy-1 that affects Salmonella enterica serovar typhimurium survival in Peyer's patches. J Bacteriol (2000) 2.10
Characterization of repetitive sequences controlling phase variation of Haemophilus influenzae lipopolysaccharide. J Bacteriol (1990) 2.08
A case control study of infection with an epidemic strain of multiresistant Salmonella typhimurium DT104 in England and Wales. Commun Dis Rep CDR Rev (1994) 2.04
Extensive allelic variation among Francisella tularensis strains in a short-sequence tandem repeat region. J Clin Microbiol (2001) 2.03
Salmonella typhimurium DT104: a virulent and drug-resistant pathogen. Can Vet J (1998) 1.87
Differentiation of strains in Mycobacterium tuberculosis complex by DNA sequence polymorphisms, including rapid identification of M. bovis BCG. J Clin Microbiol (1995) 1.81
Differentiation of strains of Xylella fastidiosa by a variable number of tandem repeat analysis. Appl Environ Microbiol (2001) 1.76
Characterisation of integrons and antibiotic resistance genes in Danish multiresistant Salmonella enterica Typhimurium DT104. FEMS Microbiol Lett (1997) 1.72
Outbreak of amoxicillin-resistant Haemophilus influenzae type b: variable number of tandem repeats as novel molecular markers. J Clin Microbiol (1997) 1.35
Tetrameric repeat units associated with virulence factor phase variation in Haemophilus also occur in Neisseria spp. and Moraxella catarrhalis. FEMS Microbiol Lett (1996) 1.34
Molecular typing of Mycobacterium tuberculosis based on variable number of tandem DNA repeats used alone and in association with spoligotyping. J Clin Microbiol (2000) 1.28
Biology and applications of human minisatellite loci. Curr Opin Genet Dev (1992) 1.20
Contributions of genome sequencing to understanding the biology of Helicobacter pylori. Annu Rev Microbiol (1999) 1.15
Evolution and function of tandem repeats in the major surface protein 1a of the ehrlichial pathogen Anaplasma marginale. Anim Health Res Rev (2001) 1.13
Molecular survey of the Salmonella phage typing system of Anderson. J Bacteriol (1999) 1.11
Multiply resistant (MR) Salmonella enterica serotype Typhimurium DT 12 and DT 120: a case of MR DT 104 in disguise? Emerg Infect Dis (2002) 1.05
Epidemiological studies of human and animal Salmonella typhimurium DT104 and DT104b isolates in Ireland. Epidemiol Infect (2001) 1.05
Genomic fingerprinting of shigatoxin-producing Escherichia coli (STEC) strains: comparison of pulsed-field gel electrophoresis (PFGE) and fluorescent amplified-fragment-length polymorphism (FAFLP). Epidemiol Infect (2000) 1.02
Emerging antibiotic resistance in Salmonella typhimurium in Norway. Epidemiol Infect (2000) 0.97
Abomasitis associated with multiple antibiotic resistant Salmonella enterica serotype Typhimurium phagetype DT104. Vet Microbiol (2002) 0.84
Rare alleles at different VNTR loci among lung-cancer patients with microsatellite instability in tumours. Int J Cancer (1997) 0.81
Emergence of Salmonella typhimurium definitive type 104 (DT104) as an important cause of salmonellosis in horses in Ontario. Can Vet J (2001) 0.80
Salmonella typhimurium DT104 septicaemia with meningitis in neonatal piglets. Vet Q (2001) 0.79
Taking anthrax's genetic fingerprints. Science (2001) 0.78
Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis. J Microbiol Methods (2004) 2.72
Adult duct-lining cells can reprogram into β-like cells able to counter repeated cycles of toxin-induced diabetes. Dev Cell (2013) 1.46
Triclosan and antimicrobial resistance in bacteria: an overview. Microb Drug Resist (2006) 1.43
Outbreak of haemolytic uraemic syndrome in Norway caused by stx2-positive Escherichia coli O103:H25 traced to cured mutton sausages. BMC Infect Dis (2008) 1.40
Multiple-Locus Variable-Number Tandem-Repeats Analysis of Escherichia coli O157 using PCR multiplexing and multi-colored capillary electrophoresis. J Microbiol Methods (2004) 1.39
Salmonellae in avian wildlife in Norway from 1969 to 2000. Appl Environ Microbiol (2002) 1.38
Clinical and biological significance of CDK4 amplification in well-differentiated and dedifferentiated liposarcomas. Clin Cancer Res (2009) 1.34
DNA fingerprinting of Shiga-toxin producing Escherichia coli O157 based on Multiple-Locus Variable-Number Tandem-Repeats Analysis (MLVA). Ann Clin Microbiol Antimicrob (2003) 1.33
Study of polymorphic variable-number of tandem repeats loci in the ECOR collection and in a set of pathogenic Escherichia coli and Shigella isolates for use in a genotyping assay. J Microbiol Methods (2007) 1.32
Octaplex PCR and fluorescence-based capillary electrophoresis for identification of human diarrheagenic Escherichia coli and Shigella spp. J Microbiol Methods (2006) 1.29
The inactivation of Arx in pancreatic α-cells triggers their neogenesis and conversion into functional β-like cells. PLoS Genet (2013) 1.28
Characterization of class I integrons in clinical strains of Salmonella enterica subsp. enterica serovars Typhimurium and Enteritidis from Norwegian hospitals. J Med Microbiol (2003) 1.23
Outbreak of Salmonella Thompson infections linked to imported rucola lettuce. Foodborne Pathog Dis (2008) 1.20
Prevalence and characterization of integrons in blood culture Enterobacteriaceae and gastrointestinal Escherichia coli in Norway and reporting of a novel class 1 integron-located lincosamide resistance gene. Ann Clin Microbiol Antimicrob (2004) 1.13
Outbreak of Yersinia enterocolitica serogroup O:9 infection and processed pork, Norway. Emerg Infect Dis (2007) 1.07
Biofilm forming abilities of Salmonella are correlated with persistence in fish meal- and feed factories. BMC Vet Res (2009) 1.06
Novel plasmid-borne gene qacJ mediates resistance to quaternary ammonium compounds in equine Staphylococcus aureus, Staphylococcus simulans, and Staphylococcus intermedius. Antimicrob Agents Chemother (2003) 1.06
Frequency of disinfectant resistance genes and genetic linkage with beta-lactamase transposon Tn552 among clinical staphylococci. Antimicrob Agents Chemother (2002) 1.06
Epidemiologic and pathologic aspects of Salmonella typhimurium infection in passerine birds in Norway. J Wildl Dis (2003) 1.05
Widespread distribution of disinfectant resistance genes among staphylococci of bovine and caprine origin in Norway. J Clin Microbiol (2005) 1.03
Molecular epidemiology of Salmonella enterica serovar typhimurium isolates determined by pulsed-field gel electrophoresis: comparison of isolates from avian wildlife, domestic animals, and the environment in Norway. Appl Environ Microbiol (2002) 1.01
Salmonella Typhimurium DT104 outbreak linked to imported minced beef, Norway, October-November 2005. Euro Surveill (2005) 0.98
Enhanced surface colonization by Escherichia coli O157:H7 in biofilms formed by an Acinetobacter calcoaceticus isolate from meat-processing environments. Appl Environ Microbiol (2010) 0.93
Molecular analyses of Salmonella enterica isolates from fish feed factories and fish feed ingredients. Appl Environ Microbiol (2003) 0.92
Multiple-locus variable-number tandem-repeats analysis of Listeria monocytogenes using multicolour capillary electrophoresis and comparison with pulsed-field gel electrophoresis typing. J Microbiol Methods (2007) 0.91
Norwegian sheep are an important reservoir for human-pathogenic Escherichia coli O26:H11. Appl Environ Microbiol (2012) 0.91
The homeodomain-containing transcription factors Arx and Pax4 control enteroendocrine subtype specification in mice. PLoS One (2012) 0.90
Factor VIIa induces tissue factor-dependent up-regulation of interleukin-8 in a human keratinocyte line. J Biol Chem (2002) 0.88
Reduction of verotoxigenic Escherichia coli in production of fermented sausages. Meat Sci (2011) 0.86
Molecular epidemiology and disinfectant susceptibility of Listeria monocytogenes from meat processing plants and human infections. Int J Food Microbiol (2004) 0.85
Identification of the anti-terminator qO111:H)- gene in Norwegian sorbitol-fermenting Escherichia coli O157:NM. FEMS Microbiol Lett (2012) 0.83
Performance of two commercial rapid methods for sampling and detection of Listeria in small-scale cheese producing and salmon processing environments. J Microbiol Methods (2012) 0.82
Micro ecosystems from feed industry surfaces: a survival and biofilm study of Salmonella versus host resident flora strains. BMC Vet Res (2010) 0.82
Microarray-based transcriptome of Listeria monocytogenes adapted to sublethal concentrations of acetic acid, lactic acid, and hydrochloric acid. Can J Microbiol (2012) 0.82
High stability of Stx2 phage in food and under food-processing conditions. Appl Environ Microbiol (2011) 0.82
Let-7 microRNA and HMGA2 levels of expression are not inversely linked in adipocytic tumors: analysis of 56 lipomas and liposarcomas with molecular cytogenetic data. Genes Chromosomes Cancer (2011) 0.81
Induction of multiple cycles of pancreatic β-cell replacement. Cell Cycle (2013) 0.80
Discriminatory power, typability, and accuracy of single nucleotide extension microarrays. J AOAC Int (2007) 0.80
From pancreas morphogenesis to β-cell regeneration. Curr Top Dev Biol (2013) 0.79
Deletion of pT181-like sequence in an smr-encoding mosaic plasmid harboured by a persistent bovine Staphylococcus warneri strain. J Antimicrob Chemother (2005) 0.78
A retroviral vector for siRNA expression in mammalian cells. Mol Biotechnol (2007) 0.78
Shiga toxigenic Escherichia coli show strain dependent reductions under dry-fermented sausage production and post-processing conditions. Int J Food Microbiol (2012) 0.77
Assessment of the antibacterial activity of a triclosan-containing cutting board. Int J Food Microbiol (2011) 0.76
[Reprogramming pancreatic cells to β cells]. Med Sci (Paris) (2013) 0.75
Regulated expression of a transgene introduced on an oriP/EBNA-1 PAC shuttle vector into human cells. BMC Biotechnol (2009) 0.75
Consumer preferences, internal color and reduction of shigatoxigenic Escherichia coli in cooked hamburgers. Meat Sci (2013) 0.75