Published in Appl Environ Microbiol on September 01, 2003
A guide to the natural history of freshwater lake bacteria. Microbiol Mol Biol Rev (2011) 4.06
Biogeography: an emerging cornerstone for understanding prokaryotic diversity, ecology, and evolution. Microb Ecol (2007) 2.78
Distribution of typical freshwater bacterial groups is associated with pH, temperature, and lake water retention time. Appl Environ Microbiol (2005) 2.55
Metagenomics of the water column in the pristine upper course of the Amazon river. PLoS One (2011) 1.74
Members of a readily enriched beta-proteobacterial clade are common in surface waters of a humic lake. Appl Environ Microbiol (2003) 1.74
Ecotypes of planktonic actinobacteria with identical 16S rRNA genes adapted to thermal niches in temperate, subtropical, and tropical freshwater habitats. Appl Environ Microbiol (2005) 1.72
Bacterioplankton community composition along a salinity gradient of sixteen high-mountain lakes located on the Tibetan Plateau, China. Appl Environ Microbiol (2006) 1.71
Abundances, identity, and growth state of actinobacteria in mountain lakes of different UV transparency. Appl Environ Microbiol (2005) 1.69
Structure and function of bacterial communities emerging from different sources under identical conditions. Appl Environ Microbiol (2006) 1.51
Bacterial community structure of acid-impacted lakes: what controls diversity? Appl Environ Microbiol (2008) 1.50
Low intraspecific diversity in a polynucleobacter subcluster population numerically dominating bacterioplankton of a freshwater pond. Appl Environ Microbiol (2005) 1.49
Emended description of the genus Polynucleobacter and the species Polynucleobacter necessarius and proposal of two subspecies, P. necessarius subsp. necessarius subsp. nov. and P. necessarius subsp. asymbioticus subsp. nov. Int J Syst Evol Microbiol (2009) 1.45
Strain-specific differences in the grazing sensitivities of closely related ultramicrobacteria affiliated with the Polynucleobacter cluster. Appl Environ Microbiol (2004) 1.44
Captured diversity in a culture collection: case study of the geographic and habitat distributions of environmental isolates held at the american type culture collection. Appl Environ Microbiol (2005) 1.35
Representative freshwater bacterioplankton isolated from Crater Lake, Oregon. Appl Environ Microbiol (2004) 1.28
Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of beta-proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir. Appl Environ Microbiol (2005) 1.27
Ubiquity of Polynucleobacter necessarius subspecies asymbioticus results from ecological diversification. Environ Microbiol (2011) 1.20
The passive yet successful way of planktonic life: genomic and experimental analysis of the ecology of a free-living polynucleobacter population. PLoS One (2012) 1.19
Fate of heterotrophic microbes in pelagic habitats: focus on populations. Microbiol Mol Biol Rev (2005) 1.18
Ubiquity of Polynucleobacter necessarius ssp. asymbioticus in lentic freshwater habitats of a heterogeneous 2000 km area. Environ Microbiol (2009) 1.17
Specific detection, isolation, and characterization of selected, previously uncultured members of the freshwater bacterioplankton community. Appl Environ Microbiol (2005) 1.12
Metagenomes of Mediterranean coastal lagoons. Sci Rep (2012) 1.11
Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics. PLoS One (2014) 1.11
Bacteria associated with benthic diatoms from Lake Constance: phylogeny and influences on diatom growth and secretion of extracellular polymeric substances. Appl Environ Microbiol (2008) 1.08
The native bacterioplankton community in the central baltic sea is influenced by freshwater bacterial species. Appl Environ Microbiol (2007) 1.07
Bacterial community composition in Central European running waters examined by temperature gradient gel electrophoresis and sequence analysis of 16S rRNA genes. Appl Environ Microbiol (2007) 1.06
Polynucleobacter cosmopolitanus sp. nov., free-living planktonic bacteria inhabiting freshwater lakes and rivers. Int J Syst Evol Microbiol (2009) 1.05
Phylogenetic characterization of 16S rRNA gene clones from deep-groundwater microorganisms that pass through 0.2-micrometer-pore-size filters. Appl Environ Microbiol (2005) 1.04
Assessing niche separation among coexisting Limnohabitans strains through interactions with a competitor, viruses, and a bacterivore. Appl Environ Microbiol (2009) 1.01
Polynucleobacter acidiphobus sp. nov., a representative of an abundant group of planktonic freshwater bacteria. Int J Syst Evol Microbiol (2010) 0.97
Involvement of cell surface structures in size-independent grazing resistance of freshwater Actinobacteria. Appl Environ Microbiol (2009) 0.97
Characterization of bacterial communities associated with organic aggregates in a large, shallow, eutrophic freshwater lake (Lake Taihu, China). Microb Ecol (2009) 0.96
Building on basic metagenomics with complementary technologies. Genome Biol (2007) 0.93
Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria. Proc Natl Acad Sci U S A (2013) 0.93
Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1(T)). Stand Genomic Sci (2012) 0.93
Detection and isolation of ultrasmall microorganisms from a 120,000-year-old Greenland glacier ice core. Appl Environ Microbiol (2005) 0.93
Polynucleobacter difficilis sp. nov., a planktonic freshwater bacterium affiliated with subcluster B1 of the genus Polynucleobacter. Int J Syst Evol Microbiol (2011) 0.92
Polynucleobacter rarus sp. nov., a free-living planktonic bacterium isolated from an acidic lake. Int J Syst Evol Microbiol (2010) 0.91
Contrasting trends in distribution of four major planktonic betaproteobacterial groups along a pH gradient of epilimnia of 72 freshwater habitats. FEMS Microbiol Ecol (2012) 0.89
Variability of prokaryotic community structure in a drinking water reservoir (Marathonas, Greece). Microbes Environ (2011) 0.88
Lineage-specific responses of microbial communities to environmental change. Appl Environ Microbiol (2012) 0.87
Bacterial community structure across environmental gradients in permafrost thaw ponds: methanotroph-rich ecosystems. Front Microbiol (2015) 0.86
Global phylogeography of pelagic Polynucleobacter bacteria: restricted geographic distribution of subgroups, isolation by distance and influence of climate. Environ Microbiol (2014) 0.85
Metagenomic analysis of 0.2-μm-passable microorganisms in deep-sea hydrothermal fluid. Mar Biotechnol (NY) (2011) 0.85
Toward understanding the dynamics of microbial communities in an estuarine system. PLoS One (2014) 0.85
Reverse evolution: driving forces behind the loss of acquired photosynthetic traits. PLoS One (2009) 0.84
Complete ecological isolation and cryptic diversity in Polynucleobacter bacteria not resolved by 16S rRNA gene sequences. ISME J (2016) 0.84
Differential freshwater flagellate community response to bacterial food quality with a focus on Limnohabitans bacteria. ISME J (2013) 0.83
Spatiotemporal analysis of microbial community dynamics during seasonal stratification events in a freshwater lake (Grand Lake, OK, USA). PLoS One (2017) 0.82
Spatial dominance and inorganic carbon assimilation by conspicuous autotrophic biofilms in a physical and chemical gradient of a cold sulfurous spring: the role of differential ecological strategies. Microb Ecol (2005) 0.82
Changes in pelagic bacteria communities due to leaf litter addition. Microb Ecol (2010) 0.81
Phylotype diversity of deep-sea hydrothermal vent prokaryotes trapped by 0.2- and 0.1-microm-pore-size filters. Extremophiles (2007) 0.79
Reclassification of four Polynucleobacter necessarius strains as representatives of Polynucleobacter asymbioticus comb. nov., Polynucleobacter duraquae sp. nov., Polynucleobacter yangtzensis sp. nov. and Polynucleobacter sinensis sp. nov., and emended description of Polynucleobacter necessarius. Int J Syst Evol Microbiol (2016) 0.78
Genomes of model organisms: know thy tools. Environ Microbiol (2008) 0.77
Dissolved organic carbon as major environmental factor affecting bacterioplankton communities in mountain lakes of eastern Japan. Microb Ecol (2011) 0.77
Microdiversification of a pelagic Polynucleobacter species is mainly driven by acquisition of genomic islands from a partially interspecific gene pool. Appl Environ Microbiol (2016) 0.75
Riverine Bacterial Communities Reveal Environmental Disturbance Signatures within the Betaproteobacteria and Verrucomicrobia. Front Microbiol (2016) 0.75
Marine and giant viruses as indicators of a marine microbial community in a riverine system. Microbiologyopen (2016) 0.75
Polynucleobacter wuianus sp. nov., a free-living freshwater bacterium affiliated with the cryptic species complex PnecC. Int J Syst Evol Microbiol (2016) 0.75
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31
MEGA2: molecular evolutionary genetics analysis software. Bioinformatics (2001) 38.50
Cultivation of the ubiquitous SAR11 marine bacterioplankton clade. Nature (2002) 7.08
Phylogenetic analysis of particle-attached and free-living bacterial communities in the Columbia river, its estuary, and the adjacent coastal ocean. Appl Environ Microbiol (1999) 6.37
Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria. Appl Environ Microbiol (2000) 5.75
Bacterial diversity in Adirondack mountain lakes as revealed by 16S rRNA gene sequences. Appl Environ Microbiol (1997) 3.29
Direct and indirect evidence of size-selective grazing on pelagic bacteria by freshwater nanoflagellates. Appl Environ Microbiol (1992) 3.28
Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir. Appl Environ Microbiol (2001) 3.05
Morphological and compositional shifts in an experimental bacterial community influenced by protists with contrasting feeding modes. Appl Environ Microbiol (1997) 2.63
Isolation of novel ultramicrobacteria classified as actinobacteria from five freshwater habitats in Europe and Asia. Appl Environ Microbiol (2003) 2.50
Grazing of protozoa and its effect on populations of aquatic bacteria. FEMS Microbiol Ecol (2001) 2.49
Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source. Appl Environ Microbiol (2003) 2.48
Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis. Appl Environ Microbiol (2002) 2.27
Bacterial filament formation, a defense mechanism against flagellate grazing, is growth rate controlled in bacteria of different phyla. Appl Environ Microbiol (1999) 2.00
Classification of metal-resistant bacteria from industrial biotopes as Ralstonia campinensis sp. nov., Ralstonia metallidurans sp. nov. and Ralstonia basilensis Steinle et al. 1998 emend. Int J Syst Evol Microbiol (2001) 1.94
Members of a readily enriched beta-proteobacterial clade are common in surface waters of a humic lake. Appl Environ Microbiol (2003) 1.74
Seasonal dynamics of bacterioplankton community structure in a eutrophic lake as determined by 5S rRNA analysis. Appl Environ Microbiol (1999) 1.57
Flagellate predation on a bacterial model community: interplay of size-selective grazing, specific bacterial cell size, and bacterial community composition. Appl Environ Microbiol (1999) 1.50
Effect of signal compounds and incubation conditions on the culturability of freshwater bacterioplankton. Appl Environ Microbiol (2003) 1.40
Aerobic mineralization of 2,6-dichlorophenol by Ralstonia sp. strain RK1. Appl Environ Microbiol (1998) 1.27
Bacterioplankton community diversity in a maritime Antarctic lake, determined by culture-dependent and culture-independent techniques. FEMS Microbiol Ecol (2003) 1.16
Polynucleobacter necessarius, an obligate bacterial endosymbiont of the hypotrichous ciliate Euplotes aediculatus, is a member of the beta-subclass of Proteobacteria. FEMS Microbiol Lett (1996) 1.12
Bacterial symbioses. Predation and mutually beneficial associations. Int Microbiol (1999) 0.84