Published in Physiol Genomics on December 16, 2003
Identification of replication origins in archaeal genomes based on the Z-curve method. Archaea (2005) 1.83
The fate of laterally transferred genes: life in the fast lane to adaptation or death. Genome Res (2006) 1.66
The role of laterally transferred genes in adaptive evolution. BMC Evol Biol (2007) 1.18
Siderophore-mediated iron acquisition systems in Bacillus cereus: Identification of receptors for anthrax virulence-associated petrobactin . Biochemistry (2009) 1.12
Recognition of prokaryotic promoters based on a novel variable-window Z-curve method. Nucleic Acids Res (2011) 0.90
Genomic islands in the Corynebacterium efficiens genome. Appl Environ Microbiol (2005) 0.85
Using the nucleotide substitution rate matrix to detect horizontal gene transfer. BMC Bioinformatics (2006) 0.85
Making sense of an alphabet soup: the use of a new bioinformatics tool for identification of novel gene islands. Focus on "identification of genomic islands in the genome of Bacillus cereus by comparative analysis with Bacillus anthracis". Physiol Genomics (2004) 0.83
A Brief Review: The Z-curve Theory and its Application in Genome Analysis. Curr Genomics (2014) 0.83
Accurate localization of the integration sites of two genomic islands at single-nucleotide resolution in the genome of Bacillus cereus ATCC 10987. Comp Funct Genomics (2008) 0.82
Identification of Horizontally-transferred Genomic Islands and Genome Segmentation Points by Using the GC Profile Method. Curr Genomics (2014) 0.79
'Genome order index' should not be used for defining compositional constraints in nucleotide sequences--a case study of the Z-curve. Biol Direct (2010) 0.77
Inside the Pan-genome - Methods and Software Overview. Curr Genomics (2015) 0.75
ZCURVE: a new system for recognizing protein-coding genes in bacterial and archaeal genomes. Nucleic Acids Res (2003) 5.12
Ori-Finder: a web-based system for finding oriCs in unannotated bacterial genomes. BMC Bioinformatics (2008) 3.65
GS-Finder: a program to find bacterial gene start sites with a self-training method. Int J Biochem Cell Biol (2004) 3.00
DEG: a database of essential genes. Nucleic Acids Res (2004) 2.42
A proposal for calculating weighted citations based on author rank. EMBO Rep (2009) 2.25
DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements. Nucleic Acids Res (2013) 2.01
GC-Profile: a web-based tool for visualizing and analyzing the variation of GC content in genomic sequences. Nucleic Acids Res (2006) 1.89
Identification of replication origins in archaeal genomes based on the Z-curve method. Archaea (2005) 1.83
DoriC: a database of oriC regions in bacterial genomes. Bioinformatics (2007) 1.74
DoriC 5.0: an updated database of oriC regions in both bacterial and archaeal genomes. Nucleic Acids Res (2012) 1.59
ZCURVE_V: a new self-training system for recognizing protein-coding genes in viral and phage genomes. BMC Bioinformatics (2006) 1.54
Comparison of various algorithms for recognizing short coding sequences of human genes. Bioinformatics (2004) 1.39
A systematic method to identify genomic islands and its applications in analyzing the genomes of Corynebacterium glutamicum and Vibrio vulnificus CMCP6 chromosome I. Bioinformatics (2004) 1.37
Multiple replication origins of the archaeon Halobacterium species NRC-1. Biochem Biophys Res Commun (2003) 1.28
Seven GC-rich microbial genomes adopt similar codon usage patterns regardless of their phylogenetic lineages. Biochem Biophys Res Commun (2003) 1.12
Greglist: a database listing potential G-quadruplex regulated genes. Nucleic Acids Res (2007) 1.07
Prediction of proteinase cleavage sites in polyproteins of coronaviruses and its applications in analyzing SARS-CoV genomes. FEBS Lett (2003) 1.01
Functionality of essential genes drives gene strand-bias in bacterial genomes. Biochem Biophys Res Commun (2010) 1.00
ZCURVE_CoV: a new system to recognize protein coding genes in coronavirus genomes, and its applications in analyzing SARS-CoV genomes. Biochem Biophys Res Commun (2003) 0.98
Identification of isochore boundaries in the human genome using the technique of wavelet multiresolution analysis. Biochem Biophys Res Commun (2003) 0.97
Single replication origin of the archaeon Methanosarcina mazei revealed by the Z curve method. Biochem Biophys Res Commun (2002) 0.96
Isochore structures in the genome of the plant Arabidopsis thaliana. J Mol Evol (2004) 0.92
Identification of replication origins in the genome of the methanogenic archaeon, Methanocaldococcus jannaschii. Extremophiles (2004) 0.91
Gene recognition based on nucleotide distribution of ORFs in a hyper-thermophilic crenarchaeon, Aeropyrum pernix K1. DNA Res (2004) 0.91
Gene recognition from questionable ORFs in bacterial and archaeal genomes. J Biomol Struct Dyn (2003) 0.89
Analysis of nucleotide distribution in the genome of Streptomyces coelicolor A3(2) using the Z curve method. FEBS Lett (2003) 0.89
Origins of replication in Cyanothece 51142. Proc Natl Acad Sci U S A (2008) 0.89
Genomic islands in Rhodopseudomonas palustris. Nat Biotechnol (2004) 0.88
The impact of comparative genomics on infectious disease research. Microbes Infect (2006) 0.88
DeOri: a database of eukaryotic DNA replication origins. Bioinformatics (2012) 0.86
Genomic islands in the Corynebacterium efficiens genome. Appl Environ Microbiol (2005) 0.85
Promoter methylation of H-cadherin is a potential biomarker in patients with bladder transitional cell carcinoma. Int Urol Nephrol (2011) 0.84
A proposal for a novel impact factor as an alternative to the JCR impact factor. Sci Rep (2013) 0.83
A reduction in both visceral and subcutaneous fats contributes to increased adiponectin by lifestyle intervention in the Diabetes Prevention Program. Acta Diabetol (2014) 0.83
A graphic representation of protein sequence and predicting the subcellular locations of prokaryotic proteins. Int J Biochem Cell Biol (2002) 0.83
Accurate localization of the integration sites of two genomic islands at single-nucleotide resolution in the genome of Bacillus cereus ATCC 10987. Comp Funct Genomics (2008) 0.82
Origins of replication in Sorangium cellulosum and Microcystis aeruginosa. DNA Res (2008) 0.82
Coronavirus phylogeny based on a geometric approach. Mol Phylogenet Evol (2005) 0.81
Isochore structures in the chicken genome. FEBS J (2006) 0.80
Recognizing shorter coding regions of human genes based on the statistics of stop codons. Biopolymers (2002) 0.79
Gene essentiality analysis based on DEG 10, an updated database of essential genes. Methods Mol Biol (2015) 0.78
Biological implications of isochore boundaries in the human genome. J Biomol Struct Dyn (2008) 0.77
Prediction of replication time zones at single nucleotide resolution in the human genome. FEBS Lett (2008) 0.76
Comparison of journal self-citation rates between some Chinese and non-Chinese international journals. PLoS One (2012) 0.75
Editorial: Z-curve Applications in Genome Analysis. Curr Genomics (2014) 0.75
Exome sequencing identifies novel ApoB loss-of-function mutations causing hypobetalipoproteinemia in type 1 diabetes. Acta Diabetol (2014) 0.75
Pharmacokinetic interaction between scutellarin and valsartan in rats. Yao Xue Xue Bao (2013) 0.75