Published in Bioinformatics on February 05, 2004
DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists. Nucleic Acids Res (2007) 17.46
The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists. Genome Biol (2007) 16.46
A systems biology approach for pathway level analysis. Genome Res (2007) 6.95
Characterization of genome-wide p53-binding sites upon stress response. Nucleic Acids Res (2008) 2.67
ArrayXPath II: mapping and visualizing microarray gene-expression data with biomedical ontologies and integrated biological pathway resources using Scalable Vector Graphics. Nucleic Acids Res (2005) 1.58
Differential expression and prognostic significance of SOX genes in pediatric medulloblastoma and ependymoma identified by microarray analysis. Neuro Oncol (2008) 1.39
Gene expression in the brain and kidney of rainbow trout in response to handling stress. BMC Genomics (2005) 1.23
The unique genomic properties of sex-biased genes: insights from avian microarray data. BMC Genomics (2008) 1.22
Unravelling the hidden heterogeneities of diffuse large B-cell lymphoma based on coupled two-way clustering. BMC Genomics (2007) 1.15
Adaptive evolution of proteins secreted during sperm maturation: an analysis of the mouse epididymal transcriptome. Mol Biol Evol (2007) 1.13
Proteomics and comparative genomic investigations reveal heterogeneity in evolutionary rate of male reproductive proteins in mice (Mus domesticus). Mol Biol Evol (2009) 1.07
The origins of apicomplexan sequence innovation. Genome Res (2009) 1.03
BiGGEsTS: integrated environment for biclustering analysis of time series gene expression data. BMC Res Notes (2009) 0.98
Gene identification and analysis of transcripts differentially regulated in fracture healing by EST sequencing in the domestic sheep. BMC Genomics (2006) 0.96
Identification of ejaculated proteins in the house mouse (Mus domesticus) via isotopic labeling. BMC Genomics (2011) 0.91
Systemic analysis of heat shock response induced by heat shock and a proteasome inhibitor MG132. PLoS One (2011) 0.91
Transcriptome analyses of inhibitor-treated schistosome females provide evidence for cooperating Src-kinase and TGFβ receptor pathways controlling mitosis and eggshell formation. PLoS Pathog (2013) 0.89
Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp. BMC Plant Biol (2012) 0.87
Detection of composite communities in multiplex biological networks. Sci Rep (2015) 0.85
Identification of the Schistosoma mansoni TNF-alpha receptor gene and the effect of human TNF-alpha on the parasite gene expression profile. PLoS Negl Trop Dis (2009) 0.84
Effect of human TGF-β on the gene expression profile of Schistosoma mansoni adult worms. Mol Biochem Parasitol (2012) 0.84
Combinatory microarray and SuperSAGE analyses identify pairing-dependently transcribed genes in Schistosoma mansoni males, including follistatin. PLoS Negl Trop Dis (2013) 0.84
Systematic interpretation of microarray data using experiment annotations. BMC Genomics (2006) 0.83
Imatinib treatment causes substantial transcriptional changes in adult Schistosoma mansoni in vitro exhibiting pleiotropic effects. PLoS Negl Trop Dis (2014) 0.81
Expression QTL modules as functional components underlying higher-order phenotypes. PLoS One (2010) 0.80
UFFizi: a generic platform for ranking informative features. BMC Bioinformatics (2010) 0.78
Integrating Information in Biological Ontologies and Molecular Networks to Infer Novel Terms. Sci Rep (2016) 0.75
The genome of the African trypanosome Trypanosoma brucei. Science (2005) 11.48
Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database. Bioinformatics (2008) 9.17
Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania. Am J Hum Genet (2011) 3.53
BamView: viewing mapped read alignment data in the context of the reference sequence. Bioinformatics (2010) 3.24
An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasm. Proc Natl Acad Sci U S A (2005) 3.06
Tumor localization of 16beta-18F-fluoro-5alpha-dihydrotestosterone versus 18F-FDG in patients with progressive, metastatic prostate cancer. J Nucl Med (2004) 2.89
New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq. Mol Microbiol (2010) 2.76
The systematic functional analysis of Plasmodium protein kinases identifies essential regulators of mosquito transmission. Cell Host Microbe (2010) 2.13
A genome-wide association study identifies five loci influencing facial morphology in Europeans. PLoS Genet (2012) 1.91
Mutability of Y-chromosomal microsatellites: rates, characteristics, molecular bases, and forensic implications. Am J Hum Genet (2010) 1.88
Dating the age of admixture via wavelet transform analysis of genome-wide data. Genome Biol (2011) 1.65
Comprehensive mutation analysis of 17 Y-chromosomal short tandem repeat polymorphisms included in the AmpFlSTR Yfiler PCR amplification kit. Int J Legal Med (2009) 1.50
Digital quantification of human eye color highlights genetic association of three new loci. PLoS Genet (2010) 1.45
The HIrisPlex system for simultaneous prediction of hair and eye colour from DNA. Forensic Sci Int Genet (2012) 1.44
A comprehensive evaluation of rodent malaria parasite genomes and gene expression. BMC Biol (2014) 1.31
Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii. Genome Res (2006) 1.28
A comprehensive molecular study on Coffin-Siris and Nicolaides-Baraitser syndromes identifies a broad molecular and clinical spectrum converging on altered chromatin remodeling. Hum Mol Genet (2013) 1.22
Gene-Ontology analysis reveals association of tissue-specific 5' CpG-island genes with development and embryogenesis. Hum Mol Genet (2004) 1.16
A new future of forensic Y-chromosome analysis: rapidly mutating Y-STRs for differentiating male relatives and paternal lineages. Forensic Sci Int Genet (2011) 1.15
Improving global and regional resolution of male lineage differentiation by simple single-copy Y-chromosomal short tandem repeat polymorphisms. Forensic Sci Int Genet (2009) 1.13
GENOMIZER: an integrated analysis system for genome-wide association data. Hum Mutat (2006) 1.03
Meeting report: a workshop on Best Practices in Genome Annotation. Database (Oxford) (2010) 1.01
Structural features affecting variant surface glycoprotein expression in Trypanosoma brucei. Mol Biochem Parasitol (2003) 1.00
Characterization and gene expression analysis of the cir multi-gene family of Plasmodium chabaudi chabaudi (AS). BMC Genomics (2012) 0.99
Reconstructing the population history of European Romani from genome-wide data. Curr Biol (2012) 0.98
Comprehensive candidate gene study highlights UGT1A and BNC2 as new genes determining continuous skin color variation in Europeans. Hum Genet (2012) 0.95
DNA-based eye colour prediction across Europe with the IrisPlex system. Forensic Sci Int Genet (2011) 0.94
Improved tumor imaging and therapy via i.v. IgG-mediated time-sequential modulation of neonatal Fc receptor. J Clin Invest (2007) 0.90
Genetics of skin color variation in Europeans: genome-wide association studies with functional follow-up. Hum Genet (2015) 0.85
Hot and sexy moulds! Nat Rev Microbiol (2006) 0.79
Comparative assessment of the association information captured by SNP tagging. Hum Hered (2007) 0.76
Correction: Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole. PLoS Pathog (2016) 0.75
Correction: Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole. PLoS Pathog (2017) 0.75
An Automatic 3D Facial Landmarking Algorithm Using 2D Gabor Wavelets. IEEE Trans Image Process (2015) 0.75