Published in Appl Environ Microbiol on July 01, 2004
Comparison of soil bacterial communities under diverse agricultural land management and crop production practices. Microb Ecol (2007) 1.34
Animal-to-animal variation in fecal microbial diversity among beef cattle. Appl Environ Microbiol (2010) 1.33
Biases during DNA extraction of activated sludge samples revealed by high throughput sequencing. Appl Microbiol Biotechnol (2012) 1.28
Alteration of the ileal microbiota of weanling piglets by the growth-promoting antibiotic chlortetracycline. Appl Environ Microbiol (2009) 1.15
Monitoring bacterial communities in raw milk and cheese by culture-dependent and -independent 16S rRNA gene-based analyses. Appl Environ Microbiol (2007) 1.15
Testing for differentiation of microbial communities using phylogenetic methods: accounting for uncertainty of phylogenetic inference and character state mapping. Microb Ecol (2006) 0.96
Cow teat skin, a potential source of diverse microbial populations for cheese production. Appl Environ Microbiol (2011) 0.90
Altered protozoan and bacterial communities and survival of Escherichia coli O157:H7 in monensin-treated wastewater from a dairy lagoon. PLoS One (2013) 0.87
Extractable organic components and nutrients in wastewater from dairy lagoons influence the growth and survival of Escherichia coli O157:H7. Appl Environ Microbiol (2007) 0.87
Sources of clostridia in raw milk on farms. Appl Environ Microbiol (2008) 0.87
Bacterial population dynamics in dairy waste during aerobic and anaerobic treatment and subsequent storage. Appl Environ Microbiol (2006) 0.86
Bacterial communities in aerosols and manure samples from two different dairies in central and Sonoma valleys of California. PLoS One (2011) 0.83
Comparison of DNA extraction kits and modification of DNA elution procedure for the quantitation of subdominant bacteria from piggery effluents with real-time PCR. Microbiologyopen (2014) 0.80
Denaturing gradient gel electrophoresis can rapidly display the bacterial diversity contained in 16S rDNA clone libraries. Microb Ecol (2006) 0.78
Assessment of bacterial and archaeal community structure in Swine wastewater treatment processes. Microb Ecol (2014) 0.77
An Overview of the Control of Bacterial Pathogens in Cattle Manure. Int J Environ Res Public Health (2016) 0.76
DNA-based culture-independent analysis detects the presence of group a streptococcus in throat samples from healthy adults in Japan. BMC Microbiol (2016) 0.75
Effect of Neem (Azadirachta indica) on the Survival of Escherichia coli O157:H7 in Dairy Manure. Int J Environ Res Public Health (2015) 0.75
MEGA2: molecular evolutionary genetics analysis software. Bioinformatics (2001) 38.50
The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res (2003) 18.64
Bias in template-to-product ratios in multitemplate PCR. Appl Environ Microbiol (1998) 10.53
Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes. Appl Environ Microbiol (1998) 8.56
Molecular microbial diversity of an anaerobic digestor as determined by small-subunit rDNA sequence analysis. Appl Environ Microbiol (1997) 6.04
The epidemiology of Mycobacterium bovis infections in animals and man: a review. Tuber Lung Dis (1995) 5.20
Biology of moderately halophilic aerobic bacteria. Microbiol Mol Biol Rev (1998) 4.30
Culture-independent analysis of gut bacteria: the pig gastrointestinal tract microbiota revisited. Appl Environ Microbiol (2002) 4.26
Detection of genes for enterotoxins, exfoliative toxins, and toxic shock syndrome toxin 1 in Staphylococcus aureus by the polymerase chain reaction. J Clin Microbiol (1991) 3.32
Discrimination among thermophilic Campylobacter species by polymerase chain reaction amplification of 23S rRNA gene fragments. J Clin Microbiol (1993) 2.54
Specific identification of the enteropathogens Campylobacter jejuni and Campylobacter coli by using a PCR test based on the ceuE gene encoding a putative virulence determinant. J Clin Microbiol (1997) 2.22
Development of rRNA-targeted PCR and in situ hybridization with fluorescently labelled oligonucleotides for detection of Yersinia species. J Clin Microbiol (1998) 2.13
Manure and microbes: public and animal health problem? J Dairy Sci (1997) 2.05
Microbial community structure in midgut and hindgut of the humus-feeding larva of Pachnoda ephippiata (Coleoptera: Scarabaeidae). Appl Environ Microbiol (2003) 1.83
Diversity and community structure within anoxic sediment from marine salinity meromictic lakes and a coastal meromictic marine basin, Vestfold Hilds, Eastern Antarctica. Environ Microbiol (2000) 1.79
Recovery of novel bacterial diversity from a forested wetland impacted by reject coal. Environ Microbiol (2002) 1.78
Leaching of Escherichia coli O157:H7 in diverse soils under various agricultural management practices. Appl Environ Microbiol (2000) 1.77
Multiplex PCRs for identification of Escherichia coli virulence genes. J Clin Microbiol (2000) 1.63
Fecal shedding of Campylobacter and Arcobacter spp. in dairy cattle. Appl Environ Microbiol (2000) 1.56
Quantification of different Eubacterium spp. in human fecal samples with species-specific 16S rRNA-targeted oligonucleotide probes. Appl Environ Microbiol (2000) 1.55
Multiplex PCR for enterotoxigenic, attaching and effacing, and Shiga toxin-producing Escherichia coli strains from calves. J Clin Microbiol (1998) 1.44
Salmonella enterica serovar Typhimurium and Escherichia coli contamination of root and leaf vegetables grown in soils with incorporated bovine manure. Appl Environ Microbiol (2002) 1.38
Atraumatic Clostridial myonecrosis: case report and literature review. J Emerg Med (2003) 1.37
Risk factors for clinical salmonellosis in Virginia, USA cattle herds. Prev Vet Med (2001) 1.32
Detection and differentiation of Listeria spp. by a single reaction based on multiplex PCR. Appl Environ Microbiol (1999) 1.29
An outbreak of infection due to verocytotoxin-producing Escherichia coli O157 in four families: the influence of laboratory methods on the outcome of the investigation. Epidemiol Infect (1997) 1.28
Evaluation of broiler litter with reference to the microbial composition as assessed by using 16S rRNA and functional gene markers. Appl Environ Microbiol (2003) 1.25
Sources, pathways, and relative risks of contaminants in surface water and groundwater: a perspective prepared for the Walkerton inquiry. J Toxicol Environ Health A (2002) 1.25
An outbreak of nonflocculating catabolic populations caused the breakdown of a phenol-digesting activated-sludge process. Appl Environ Microbiol (1999) 1.21
Molecular typing and epidemiological survey of prevalence of Clostridium perfringens types by multiplex PCR. J Clin Microbiol (1997) 1.19
In situ analysis of phototrophic sulfur bacteria in the chemocline of meromictic Lake Cadagno (Switzerland). Appl Environ Microbiol (1999) 1.17
Development of primers to O-antigen biosynthesis genes for specific detection of Escherichia coli O157 by PCR. Appl Environ Microbiol (1999) 1.10
Coaggregation among nonflocculating bacteria isolated from activated sludge. Appl Environ Microbiol (2003) 1.06
A survey of agents associated with neonatal diarrhea in Iowa swine including Clostridium difficile and porcine reproductive and respiratory syndrome virus. J Vet Diagn Invest (2002) 1.06
PCR detection of Ruminococcus spp. in human and animal faecal samples. Mol Cell Probes (1997) 1.02
Characterization of microbial communities and composition in constructed dairy wetland wastewater effluent. Appl Environ Microbiol (2003) 0.99
Application of nested polymerase chain reaction to detection of Salmonella in poultry environment. J Food Prot (2002) 0.98
Pitted keratolysis: a manifestation of human dermatophilosis. Dermatologica (1988) 0.93
Mycobacterium avium subspecies paratuberculosis: a review of current knowledge. J Zoo Wildl Med (2001) 0.90
Microbial diversity of cultivatable bacteria associated with the North Sea bryozoan Flustra foliacea. Syst Appl Microbiol (2001) 0.87
Alkalibacterium olivoapovliticus gen. nov., sp. nov., a new obligately alkaliphilic bacterium isolated from edible-olive wash-waters. Int J Syst Evol Microbiol (2001) 0.86
Phylogeny and in situ identification of a morphologically conspicuous bacterium, Candidatus Magnospira bakii, present at very low frequency in activated sludge. Environ Microbiol (1999) 0.82
Microbial community analysis of thermophilic contact oxidation process by using ribosomal RNA approaches and the quinone profile method. Water Res (2002) 0.81
The filamentous bacterial morphotype 'Nostocoida limicola' I contains at least two previously described genera in the low G+C gram positive bacteria. Syst Appl Microbiol (2000) 0.77
[Fulminant spontaneous Clostridium septicum gas gangrene]. Ann Chir (2003) 0.77
Diarrhea in hospitalized patients. Am J Phys Med Rehabil (1992) 0.77
Clostridium septicum infection in cattle in the United States. J Am Vet Med Assoc (1981) 0.77
Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species. PLoS Biol (2005) 5.22
Identification of loci critical for replication and compatibility of a Borrelia burgdorferi cp32 plasmid and use of a cp32-based shuttle vector for the expression of fluorescent reporters in the lyme disease spirochaete. Mol Microbiol (2002) 2.28
Comparative genomic analysis of Campylobacter jejuni strains reveals diversity due to genomic elements similar to those present in C. jejuni strain RM1221. J Clin Microbiol (2006) 2.27
Comparison of Campylobacter jejuni lipooligosaccharide biosynthesis loci from a variety of sources. J Clin Microbiol (2005) 1.91
Colonization of Arabidopsis thaliana with Salmonella enterica and enterohemorrhagic Escherichia coli O157:H7 and competition by Enterobacter asburiae. Appl Environ Microbiol (2003) 1.71
Speciation of Campylobacter coli, C. jejuni, C. helveticus, C. lari, C. sputorum, and C. upsaliensis by matrix-assisted laser desorption ionization-time of flight mass spectrometry. Appl Environ Microbiol (2005) 1.49
Complete Genome Sequence of the Arcobacter butzleri Cattle Isolate 7h1h. Genome Announc (2013) 1.39
Progressive genome-wide introgression in agricultural Campylobacter coli. Mol Ecol (2012) 1.37
Differentiation of Campylobacter coli, Campylobacter jejuni, Campylobacter lari, and Campylobacter upsaliensis by a multiplex PCR developed from the nucleotide sequence of the lipid A gene lpxA. J Clin Microbiol (2004) 1.32
Examination of Campylobacter jejuni putative adhesins leads to the identification of a new protein, designated FlpA, required for chicken colonization. Infect Immun (2009) 1.30
Molecular characterization reveals Salmonella enterica serovar 4,[5],12:i:- from poultry is a variant Typhimurium serovar. Avian Dis (2007) 1.29
Occurrence of canine parvovirus type 2c in the United States. J Vet Diagn Invest (2007) 1.26
Evaluation of broiler litter with reference to the microbial composition as assessed by using 16S rRNA and functional gene markers. Appl Environ Microbiol (2003) 1.25
Role of the small Rho GTPases Rac1 and Cdc42 in host cell invasion of Campylobacter jejuni. Cell Microbiol (2007) 1.24
Major families of multiresistant plasmids from geographically and epidemiologically diverse staphylococci. G3 (Bethesda) (2011) 1.14
Correlation between genotypic diversity, lipooligosaccharide gene locus class variation, and caco-2 cell invasion potential of Campylobacter jejuni isolates from chicken meat and humans: contribution to virulotyping. Appl Environ Microbiol (2009) 1.13
Class 1 integron-associated tobramycin-gentamicin resistance in Campylobacter jejuni isolated from the broiler chicken house environment. Antimicrob Agents Chemother (2002) 1.11
Rapid identification of protein biomarkers of Escherichia coli O157:H7 by matrix-assisted laser desorption ionization-time-of-flight-time-of-flight mass spectrometry and top-down proteomics. Anal Chem (2010) 1.05
Campylobacter insulaenigrae isolates from northern elephant seals (Mirounga angustirostris) in California. Appl Environ Microbiol (2007) 1.05
Complete Genome Sequence of the Campylobacter coli Clinical Isolate 15-537360. Genome Announc (2013) 1.02
High-resolution genotyping of Campylobacter species by use of PCR and high-throughput mass spectrometry. J Clin Microbiol (2008) 1.02
Complete Genome Sequence of Campylobacter fetus subsp. testudinum Strain 03-427T. Genome Announc (2013) 1.01
Coinfection and vertical transmission of Brucella and Morbillivirus in a neonatal sperm whale (Physeter macrocephalus) in Hawaii, USA. J Wildl Dis (2015) 1.01
Rapid detection of Campylobacter coli, C. jejuni, and Salmonella enterica on poultry carcasses by using PCR-enzyme-linked immunosorbent assay. Appl Environ Microbiol (2003) 0.99
Clonal population structure and antimicrobial resistance of Campylobacter jejuni in chicken meat from Belgium. Appl Environ Microbiol (2009) 0.99
Comparative genomic analysis of clinical strains of Campylobacter jejuni from South Africa. PLoS One (2008) 0.99
Application of nested polymerase chain reaction to detection of Salmonella in poultry environment. J Food Prot (2002) 0.98
Typing of Campylobacter jejuni and Campylobacter coli isolated from live broilers and retail broiler meat by flaA-RFLP, MLST, PFGE and REP-PCR. J Microbiol Methods (2010) 0.97
Genomic and proteomic identification of a DNA-binding protein used in the "fingerprinting" of campylobacter species and strains by MALDI-TOF-MS protein biomarker analysis. Anal Chem (2005) 0.94
Surveillance of Staphylococcus aureus in veterinary teaching hospitals. J Clin Microbiol (2005) 0.94
Sub-speciating Campylobacter jejuni by proteomic analysis of its protein biomarkers and their post-translational modifications. J Proteome Res (2006) 0.93
Exploring the diversity of Arcobacter butzleri from cattle in the UK using MLST and whole genome sequencing. PLoS One (2013) 0.93
Diversity in the protein N-glycosylation pathways within the Campylobacter genus. Mol Cell Proteomics (2012) 0.93
The safety and efficacy of dose-sparing intradermal administration of influenza vaccine in human immunodeficiency virus-positive patients. Arch Intern Med (2006) 0.92
Dissemination of fluoroquinolone-resistant Campylobacter spp. within an integrated commercial poultry production system. Appl Environ Microbiol (2006) 0.92
Autoinducer-2 production in Campylobacter jejuni contributes to chicken colonization. Appl Environ Microbiol (2008) 0.91
Detection and genotyping of Arcobacter and Campylobacter isolates from retail chicken samples by use of DNA oligonucleotide arrays. Appl Environ Microbiol (2007) 0.91
Common genomic features of Campylobacter jejuni subsp. doylei strains distinguish them from C. jejuni subsp. jejuni. BMC Microbiol (2007) 0.89
Backyard chicken flocks pose a disease risk for neotropic birds in Costa Rica. Avian Dis (2008) 0.89
Oxygen requirement and tolerance of Campylobacter jejuni. Res Microbiol (2007) 0.88
Development of monoclonal antibodies and immunoassays for sensitive and specific detection of Shiga toxin Stx2f. PLoS One (2013) 0.88
Comprehensive laboratory evaluation of a highly specific lateral flow assay for the presumptive identification of ricin in suspicious white powders and environmental samples. Biosecur Bioterror (2013) 0.88
Multi-omics approaches to deciphering a hypervirulent strain of Campylobacter jejuni. Genome Biol Evol (2013) 0.88
Pilot study of directly observed therapy in highly nonadherent HIV-infected patients in an urban community-based institution. J Acquir Immune Defic Syndr (2003) 0.88
Bacterial population dynamics in dairy waste during aerobic and anaerobic treatment and subsequent storage. Appl Environ Microbiol (2006) 0.86
Epidemiology of a Salmonella enterica subsp. enterica serovar Typhimurium strain associated with a songbird outbreak. Appl Environ Microbiol (2012) 0.85
Evolutionary silence of the acid chaperone protein HdeB in enterohemorrhagic Escherichia coli O157:H7. Appl Environ Microbiol (2011) 0.85
Initial characterization of novel beaked whale morbillivirus in Hawaiian cetaceans. Dis Aquat Organ (2016) 0.85
First Closed Genome Sequence of Campylobacter fetus subsp. venerealis bv. intermedius. Genome Announc (2014) 0.84
Prevalence and characterization of urinary tract infections in dogs with surgically treated type 1 thoracolumbar intervertebral disc extrusion. Vet Surg (2006) 0.84
Using major outer membrane protein typing as an epidemiological tool to investigate outbreaks caused by milk-borne Campylobacter jejuni isolates in California. J Clin Microbiol (2012) 0.83
Comprehensive detection and discrimination of Campylobacter species by use of confocal micro-Raman spectroscopy and multilocus sequence typing. J Clin Microbiol (2012) 0.83
Differences in methylation at GATC sites in genomic DNA of Campylobacter coli from turkeys and swine. Appl Environ Microbiol (2010) 0.82
The absence of intervening sequences in 23S rRNA genes of Campylobacter coli isolates from Turkeys is a unique attribute of a cluster of related strains which also lack resistance to erythromycin. Appl Environ Microbiol (2006) 0.81
Prevalence of Mycoplasma bovis in backgrounding and stocker cattle operations. J Am Vet Med Assoc (2007) 0.80
Identification of disulfide reductases in Campylobacterales: a bioinformatics investigation. Antonie Van Leeuwenhoek (2007) 0.80
Johne's disease in a free-ranging white-tailed deer from Virginia and subsequent surveillance for Mycobacterium avium subspecies paratuberculosis. J Wildl Dis (2009) 0.80
Interactions of pathogens and irritant chemicals in land-applied sewage sludges (biosolids). New Solut (2002) 0.80
Investigation of shell disease in map turtles (Graptemys spp.). J Wildl Dis (2009) 0.79
Microbiologic findings in feedlot cattle with acute interstitial pneumonia. Am J Vet Res (2004) 0.79
Comprehensive laboratory evaluation of a specific lateral flow assay for the presumptive identification of abrin in suspicious white powders and environmental samples. Biosecur Bioterror (2014) 0.79
Seroprevalence of tick-borne infections in military working dogs in the Republic of Korea. Vector Borne Zoonotic Dis (2012) 0.79
Interactions of pathogens and irritant chemicals in land-applied sewage sludges (biosolids). BMC Public Health (2002) 0.79
Epitheliocystis hyperinfection in captive spotted eagle rays Aetobatus narinari associated with a novel Chlamydiales 16S rDNA signature sequence. Dis Aquat Organ (2013) 0.78
Toxic shock syndrome in a horse with Staphylococcus aureus pneumonia. J Am Vet Med Assoc (2003) 0.78
Bacterial contamination of commercial ear cleaners following routine home use. Vet Dermatol (2011) 0.77
The regulatory role of residues 226-232 in phosphoenolpyruvate carboxylase from maize. Photosynth Res (2006) 0.77
Pharmacokinetics of imipenem in dogs. Am J Vet Res (2003) 0.77
Composite sequence proteomic analysis of protein biomarkers of Campylobacter coli, C. lari and C. concisus for bacterial identification. Analyst (2007) 0.77
Analysis of a switch from enfuvirtide to raltegravir in patients with undetectable viral load: efficacy and quality of life at 24 weeks. J Int Assoc Physicians AIDS Care (Chic) (2009) 0.76
Regulation of energy metabolism by the extracytoplasmic function (ECF) σ factors of Arcobacter butzleri. PLoS One (2012) 0.75
Cat scratch disease. Ophthalmology (2012) 0.75
Comprehensive Laboratory Evaluation of a Highly Specific Lateral Flow Assay for the Presumptive Identification of Bacillus anthracis Spores in Suspicious White Powders and Environmental Samples. Health Secur (2016) 0.75
In vitro efficacy of a buffered chelating solution as an antimicrobial potentiator for antifungal drugs against fungal pathogens obtained from horses with mycotic keratitis. Am J Vet Res (2006) 0.75
Development and characterization of six monoclonal antibodies to hemagglutinin-70 of Clostridium botulinum and their application in a sandwich ELISA. Monoclon Antib Immunodiagn Immunother (2013) 0.75
Pathology in Practice. J Am Vet Med Assoc (2017) 0.75
Alternaria fungal dermatitis in a free-ranging javelina (Pecari tajacu). J Wildl Dis (2011) 0.75
Salmonella isolates from wild-caught Tokay geckos (Gekko gecko) imported to the U.S. from Indonesia. Vector Borne Zoonotic Dis (2012) 0.75
Pathology in practice. Cutaneous mycobacteriosis. J Am Vet Med Assoc (2011) 0.75
Panniculitis attributable to Mycobacterium goodii in an immunocompetent dog in Georgia. J Am Vet Med Assoc (2010) 0.75
Antemortem Diagnosis and Successful Treatment of Pulmonary Candidiasis in a Sun Conure (Aratinga solstitialis). J Avian Med Surg (2014) 0.75
Pathology in Practice. J Am Vet Med Assoc (2017) 0.75