Published in BMC Biotechnol on July 13, 2004
Studying copy number variations using a nanofluidic platform. Nucleic Acids Res (2008) 2.23
Use of real-time PCR for determining copy number and zygosity in transgenic plants. Plant Cell Rep (2004) 1.61
Critical points of DNA quantification by real-time PCR--effects of DNA extraction method and sample matrix on quantification of genetically modified organisms. BMC Biotechnol (2006) 1.16
Global cross-talk of genes of the mosquito Aedes aegypti in response to dengue virus infection. PLoS Negl Trop Dis (2011) 1.14
Statistical tools for transgene copy number estimation based on real-time PCR. BMC Bioinformatics (2007) 1.12
Piriformospora indica and Sebacina vermifera increase growth performance at the expense of herbivore resistance in Nicotiana attenuata. Oecologia (2005) 1.09
HIV-1 gp120-mediated increases in IL-8 production in astrocytes are mediated through the NF-κB pathway and can be silenced by gp120-specific siRNA. J Neuroinflammation (2010) 1.08
Serine protease inhibitors specifically defend Solanum nigrum against generalist herbivores but do not influence plant growth and development. Plant Cell (2010) 0.97
Comparative expression profiles of midgut genes in dengue virus refractory and susceptible Aedes aegypti across critical period for virus infection. PLoS One (2012) 0.92
Prion-induced activation of cholesterogenic gene expression by Srebp2 in neuronal cells. J Biol Chem (2009) 0.92
Molecular analysis of transgene and vector backbone integration into the barley genome following Agrobacterium-mediated transformation. Plant Cell Rep (2006) 0.90
Immune-related zinc finger gene ZFAT is an essential transcriptional regulator for hematopoietic differentiation in blood islands. Proc Natl Acad Sci U S A (2010) 0.88
AgarTrap-mediated genetic transformation using intact gemmae/gemmalings of the liverwort Marchantia polymorpha L. J Plant Res (2015) 0.88
The SbASR-1 gene cloned from an extreme halophyte Salicornia brachiata enhances salt tolerance in transgenic tobacco. Mar Biotechnol (NY) (2012) 0.88
Fast-tracking development of homozygous transgenic cereal lines using a simple and highly flexible real-time PCR assay. BMC Plant Biol (2013) 0.87
Overexpression of a Cytosolic Abiotic Stress Responsive Universal Stress Protein (SbUSP) Mitigates Salt and Osmotic Stress in Transgenic Tobacco Plants. Front Plant Sci (2016) 0.86
Influence of mosquito genotype on transcriptional response to dengue virus infection. Funct Integr Genomics (2014) 0.86
ZyFISH: a simple, rapid and reliable zygosity assay for transgenic mice. PLoS One (2012) 0.86
Selection of suitable endogenous reference genes for relative copy number detection in sugarcane. Int J Mol Sci (2014) 0.86
Systemin in Solanum nigrum. The tomato-homologous polypeptide does not mediate direct defense responses. Plant Physiol (2006) 0.85
RNA-binding protein Muscleblind-like 3 (MBNL3) disrupts myocyte enhancer factor 2 (Mef2) {beta}-exon splicing. J Biol Chem (2010) 0.85
RNA-directed RNA polymerase3 from Nicotiana attenuata is required for competitive growth in natural environments. Plant Physiol (2008) 0.85
The human lactase persistence-associated SNP -13910*T enables in vivo functional persistence of lactase promoter-reporter transgene expression. Hum Genet (2012) 0.85
Three-dimensionally specific inhibition of DNA repair-related genes by activated KRAS in colon crypt model. Neoplasia (2010) 0.84
Multicenter evaluation of a standardized protocol for noninvasive gene expression profiling. Am J Transplant (2013) 0.84
Progressive 35S promoter methylation increases rapidly during vegetative development in transgenic Nicotiana attenuata plants. BMC Plant Biol (2013) 0.84
Mapping DNA quantity into electrophoretic mobility through quantum dot nanotethers for high-resolution genetic and epigenetic analysis. ACS Nano (2011) 0.81
Evaluation of the use of the polyubiquitin genes, Ubi4 and Ubi10 as reference genes for expression studies in Brachypodium distachyon. PLoS One (2012) 0.80
Isolating fungal pathogens from a dynamic disease outbreak in a native plant population to establish plant-pathogen bioassays for the ecological model plant Nicotiana attenuata. PLoS One (2014) 0.80
Quantify single nucleotide polymorphism (SNP) ratio in pooled DNA based on normalized fluorescence real-time PCR. BMC Genomics (2006) 0.79
Ectopic terpene synthase expression enhances sesquiterpene emission in Nicotiana attenuata without altering defense or development of transgenic plants or neighbors. Plant Physiol (2014) 0.79
Identification and profiling of miRNAs during herbivory reveals jasmonate-dependent and -independent patterns of accumulation in Nicotiana attenuata. BMC Plant Biol (2012) 0.78
Standard addition quantitative real-time PCR (SAQPCR): a novel approach for determination of transgene copy number avoiding PCR efficiency estimation. PLoS One (2013) 0.77
TRAFD1 (FLN29) Interacts with Plekhm1 and Regulates Osteoclast Acidification and Resorption. PLoS One (2015) 0.77
Real-time PCR machine system modeling and a systematic approach for the robust design of a real-time PCR-on-a-chip system. Sensors (Basel) (2010) 0.75
Overexpression of a Plasma Membrane-Localized SbSRP-Like Protein Enhances Salinity and Osmotic Stress Tolerance in Transgenic Tobacco. Front Plant Sci (2017) 0.75
Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology. BMC Genomics (2015) 0.75
Argonaute 8 (AGO8) mediates the elicitation of primary defense against herbivory. Plant Physiol (2017) 0.75
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods (2001) 414.27
Real time quantitative PCR. Genome Res (1996) 35.79
3'-minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures. Nucleic Acids Res (2000) 5.24
Heat stress- and heat shock transcription factor-dependent expression and activity of ascorbate peroxidase in Arabidopsis. Plant Physiol (2002) 2.25
An ecologically motivated analysis of plant-herbivore interactions in native tobacco. Plant Physiol (2001) 2.23
Quantitative real-time PCR assay for determining transgene copy number in transformed plants. Biotechniques (2001) 2.01
Estimating the number of integrations in transformed plants by quantitative real-time PCR. BMC Biotechnol (2002) 1.77
Single-copy T-DNA insertions in Arabidopsis are the predominant form of integration in root-derived transgenics, whereas multiple insertions are found in leaf discs. Plant Mol Biol (1993) 1.23
Molecular and genetic characterization of elite transgenic rice plants produced by electric-discharge particle acceleration. Theor Appl Genet (1995) 0.93
Plant responses to insect herbivory: the emerging molecular analysis. Annu Rev Plant Biol (2002) 5.38
The evolutionary context for herbivore-induced plant volatiles: beyond the 'cry for help'. Trends Plant Sci (2010) 3.63
A knock-out mutation in allene oxide synthase results in male sterility and defective wound signal transduction in Arabidopsis due to a block in jasmonic acid biosynthesis. Plant J (2002) 3.34
Silencing the jasmonate cascade: induced plant defenses and insect populations. Science (2004) 3.17
Fitness costs of induced resistance: emerging experimental support for a slippery concept. Trends Plant Sci (2002) 3.00
New insights into plant responses to the attack from insect herbivores. Annu Rev Genet (2010) 2.87
Field experiments with transformed plants reveal the sense of floral scents. Science (2008) 2.63
Antisense LOX expression increases herbivore performance by decreasing defense responses and inhibiting growth-related transcriptional reorganization in Nicotiana attenuata. Plant J (2003) 2.42
SNF1-related kinases allow plants to tolerate herbivory by allocating carbon to roots. Proc Natl Acad Sci U S A (2006) 2.40
Nicotine's defensive function in nature. PLoS Biol (2004) 2.36
Herbivory rapidly activates MAPK signaling in attacked and unattacked leaf regions but not between leaves of Nicotiana attenuata. Plant Cell (2007) 2.13
Insects betray themselves in nature to predators by rapid isomerization of green leaf volatiles. Science (2010) 2.08
Silencing threonine deaminase and JAR4 in Nicotiana attenuata impairs jasmonic acid-isoleucine-mediated defenses against Manduca sexta. Plant Cell (2006) 2.05
Constitutive and inducible trypsin proteinase inhibitor production incurs large fitness costs in Nicotiana attenuata. Proc Natl Acad Sci U S A (2004) 1.98
Manipulation of endogenous trypsin proteinase inhibitor production in Nicotiana attenuata demonstrates their function as antiherbivore defenses. Plant Physiol (2004) 1.88
Shared signals -'alarm calls' from plants increase apparency to herbivores and their enemies in nature. Ecol Lett (2007) 1.78
Priming of plant defense responses in nature by airborne signaling between Artemisia tridentata and Nicotiana attenuata. Oecologia (2006) 1.76
Co(i)-ordinating defenses: NaCOI1 mediates herbivore- induced resistance in Nicotiana attenuata and reveals the role of herbivore movement in avoiding defenses. Plant J (2007) 1.72
Different lepidopteran elicitors account for cross-talk in herbivory-induced phytohormone signaling. Plant Physiol (2009) 1.67
Making sense of nectar scents: the effects of nectar secondary metabolites on floral visitors of Nicotiana attenuata. Plant J (2007) 1.64
Use of real-time PCR for determining copy number and zygosity in transgenic plants. Plant Cell Rep (2004) 1.61
Molecular interactions between the specialist herbivore Manduca sexta (Lepidoptera, Sphingidae) and its natural host Nicotiana attenuata. VII. Changes in the plant's proteome. Plant Physiol (2006) 1.59
Why does herbivore attack reconfigure primary metabolism? Plant Physiol (2008) 1.53
Herbivory-induced signalling in plants: perception and action. Plant Cell Environ (2009) 1.52
Remote sensing of future competitors: impacts on plant defenses. Proc Natl Acad Sci U S A (2006) 1.50
Comparisons of LIPOXYGENASE3- and JASMONATE-RESISTANT4/6-silenced plants reveal that jasmonic acid and jasmonic acid-amino acid conjugates play different roles in herbivore resistance of Nicotiana attenuata. Plant Physiol (2007) 1.50
Resistance management in a native plant: nicotine prevents herbivores from compensating for plant protease inhibitors. Ecol Lett (2007) 1.49
R2R3-NaMYB8 regulates the accumulation of phenylpropanoid-polyamine conjugates, which are essential for local and systemic defense against insect herbivores in Nicotiana attenuata. Plant Physiol (2010) 1.48
Induced plant defenses in the natural environment: Nicotiana attenuata WRKY3 and WRKY6 coordinate responses to herbivory. Plant Cell (2008) 1.47
Convergent responses to stress. Solar ultraviolet-B radiation and Manduca sexta herbivory elicit overlapping transcriptional responses in field-grown plants of Nicotiana longiflora. Plant Physiol (2003) 1.45
Tuning the herbivore-induced ethylene burst: the role of transcript accumulation and ethylene perception in Nicotiana attenuata. Plant J (2007) 1.45
Silencing of hydroperoxide lyase and allene oxide synthase reveals substrate and defense signaling crosstalk in Nicotiana attenuata. Plant J (2004) 1.45
Independently silencing two JAR family members impairs levels of trypsin proteinase inhibitors but not nicotine. Planta (2007) 1.44
A self-regulatory circuit of CIRCADIAN CLOCK-ASSOCIATED1 underlies the circadian clock regulation of temperature responses in Arabidopsis. Plant Cell (2012) 1.43
Herbivore-induced plant vaccination. Part I. The orchestration of plant defenses in nature and their fitness consequences in the wild tobacco Nicotiana attenuata. Plant J (2004) 1.43
Attracting friends to feast on foes: engineering terpene emission to make crop plants more attractive to herbivore enemies. Curr Opin Biotechnol (2003) 1.42
Individual variability in herbivore-specific elicitors from the plant's perspective. Mol Ecol (2004) 1.38
Herbivory-induced volatiles function as defenses increasing fitness of the native plant Nicotiana attenuata in nature. Elife (2012) 1.37
Molecular interactions between the specialist herbivore Manduca sexta (Lepidoptera, Sphigidae) and its natural host Nicotiana attenuata. VIII. An unbiased GCxGC-ToFMS analysis of the plant's elicited volatile emissions. Plant Physiol (2009) 1.34
Changing pollinators as a means of escaping herbivores. Curr Biol (2010) 1.31
Defence on demand: mechanisms behind optimal defence patterns. Ann Bot (2012) 1.30
Virus-induced gene silencing of jasmonate-induced direct defences, nicotine and trypsin proteinase-inhibitors in Nicotiana attenuata. J Exp Bot (2003) 1.30
Herbivore-induced plant vaccination. Part II. Array-studies reveal the transience of herbivore-specific transcriptional imprints and a distinct imprint from stress combinations. Plant J (2004) 1.30
Increased SA in NPR1-silenced plants antagonizes JA and JA-dependent direct and indirect defenses in herbivore-attacked Nicotiana attenuata in nature. Plant J (2007) 1.26
Silencing of a germin-like gene in Nicotiana attenuata improves performance of native herbivores. Plant Physiol (2006) 1.25
Jasmonic acid signalling and herbivore resistance traits constrain regrowth after herbivore attack in Nicotiana attenuata. Plant Cell Environ (2006) 1.24
Silencing geranylgeranyl diphosphate synthase in Nicotiana attenuata dramatically impairs resistance to tobacco hornworm. Plant Physiol (2007) 1.24
Oxylipin channelling in Nicotiana attenuata: lipoxygenase 2 supplies substrates for green leaf volatile production. Plant Cell Environ (2010) 1.23
Occurrence of tetraploidy in Nicotiana attenuata plants after Agrobacterium-mediated transformation is genotype specific but independent of polysomaty of explant tissue. Plant Cell Rep (2006) 1.23
Taking ecological function seriously: soil microbial communities can obviate allelopathic effects of released metabolites. PLoS One (2009) 1.22
Using 'mute' plants to translate volatile signals. Plant J (2006) 1.21
Dimethyl disulfide produced by the naturally associated bacterium bacillus sp B55 promotes Nicotiana attenuata growth by enhancing sulfur nutrition. Plant Cell (2013) 1.20
Petunia flowers solve the defence/apparency dilemma of pollinator attraction by deploying complex floral blends. Ecol Lett (2012) 1.19
Herbivore-associated elicitors: FAC signaling and metabolism. Trends Plant Sci (2011) 1.19
Herbivory-induced changes in the small-RNA transcriptome and phytohormone signaling in Nicotiana attenuata. Proc Natl Acad Sci U S A (2008) 1.19
Polymorphism in jasmonate signaling partially accounts for the variety of volatiles produced by Nicotiana attenuata plants in a native population. New Phytol (2009) 1.19
Specificity in ecological interactions: attack from the same lepidopteran herbivore results in species-specific transcriptional responses in two solanaceous host plants. Plant Physiol (2005) 1.18
Tissue specific diurnal rhythms of metabolites and their regulation during herbivore attack in a native tobacco, Nicotiana attenuata. PLoS One (2011) 1.18
RNA-directed RNA polymerase 1 (RdR1) mediates the resistance of Nicotiana attenuata to herbivore attack in nature. Plant J (2007) 1.18
Tobacco rattle virus vector: A rapid and transient means of silencing manduca sexta genes by plant mediated RNA interference. PLoS One (2012) 1.17
Molecular mechanisms underlying plant memory in JA-mediated defence responses. Plant Cell Environ (2008) 1.17
Native bacterial endophytes promote host growth in a species-specific manner; phytohormone manipulations do not result in common growth responses. PLoS One (2008) 1.16
MYB8 controls inducible phenolamide levels by activating three novel hydroxycinnamoyl-coenzyme A:polyamine transferases in Nicotiana attenuata. Plant Physiol (2011) 1.16
Unpredictability of nectar nicotine promotes outcrossing by hummingbirds in Nicotiana attenuata. Plant J (2012) 1.13
Development and validation of a liquid chromatography-electrospray ionization-time-of-flight mass spectrometry method for induced changes in Nicotiana attenuata leaves during simulated herbivory. J Agric Food Chem (2010) 1.12
A native plant growth promoting bacterium, Bacillus sp. B55, rescues growth performance of an ethylene-insensitive plant genotype in nature. Front Plant Sci (2012) 1.12
A comparison of two Nicotiana attenuata accessions reveals large differences in signaling induced by oral secretions of the specialist herbivore Manduca sexta. Plant Physiol (2008) 1.11
Manduca sexta recognition and resistance among allopolyploid Nicotiana host plants. Proc Natl Acad Sci U S A (2003) 1.11
Lipase activity in insect oral secretions mediates defense responses in Arabidopsis. Plant Physiol (2011) 1.11
Jasmonate perception regulates jasmonate biosynthesis and JA-Ile metabolism: the case of COI1 in Nicotiana attenuata. Plant Cell Physiol (2008) 1.11
Empoasca leafhoppers attack wild tobacco plants in a jasmonate-dependent manner and identify jasmonate mutants in natural populations. Proc Natl Acad Sci U S A (2012) 1.10
Independently silencing two photosynthetic proteins in Nicotiana attenuata has different effects on herbivore resistance. Plant Physiol (2008) 1.09
Piriformospora indica and Sebacina vermifera increase growth performance at the expense of herbivore resistance in Nicotiana attenuata. Oecologia (2005) 1.09
Caterpillar-elicited methanol emission: a new signal in plant-herbivore interactions? Plant J (2006) 1.08
Jasmonic acid and ethylene modulate local responses to wounding and simulated herbivory in Nicotiana attenuata leaves. Plant Physiol (2010) 1.08
Leaf-herbivore attack reduces carbon reserves and regrowth from the roots via jasmonate and auxin signaling. New Phytol (2013) 1.07
Silencing two herbivory-activated MAP kinases, SIPK and WIPK, does not increase Nicotiana attenuata's susceptibility to herbivores in the glasshouse and in nature. New Phytol (2009) 1.07
An ecological analysis of the herbivory-elicited JA burst and its metabolism: plant memory processes and predictions of the moving target model. PLoS One (2009) 1.05
Solar ultraviolet-B radiation and insect herbivory trigger partially overlapping phenolic responses in Nicotiana attenuata and Nicotiana longiflora. Ann Bot (2007) 1.05
Coronalon: a powerful tool in plant stress physiology. FEBS Lett (2004) 1.05
Silencing MPK4 in Nicotiana attenuata enhances photosynthesis and seed production but compromises abscisic acid-induced stomatal closure and guard cell-mediated resistance to Pseudomonas syringae pv tomato DC3000. Plant Physiol (2011) 1.05
NaJAZh regulates a subset of defense responses against herbivores and spontaneous leaf necrosis in Nicotiana attenuata plants. Plant Physiol (2012) 1.05
Nonsense-mediated mRNA decay (NMD) silences the accumulation of aberrant trypsin proteinase inhibitor mRNA in Nicotiana attenuata. Plant J (2007) 1.04
BAK1 regulates the accumulation of jasmonic acid and the levels of trypsin proteinase inhibitors in Nicotiana attenuata's responses to herbivory. J Exp Bot (2010) 1.04
The structure of the culturable root bacterial endophyte community of Nicotiana attenuata is organized by soil composition and host plant ethylene production and perception. New Phytol (2009) 1.04
Nicotiana attenuata LECTIN RECEPTOR KINASE1 suppresses the insect-mediated inhibition of induced defense responses during Manduca sexta herbivory. Plant Cell (2011) 1.04