Published in Trends Genet on August 01, 2004
Origin and evolution of spliceosomal introns. Biol Direct (2012) 1.65
Adaptive evolution of transcription factor binding sites. BMC Evol Biol (2004) 2.03
Structure and evolution of protein interaction networks: a statistical model for link dynamics and gene duplications. BMC Evol Biol (2004) 2.01
Cross-species analysis of biological networks by Bayesian alignment. Proc Natl Acad Sci U S A (2006) 1.69
Evolutionary population genetics of promoters: predicting binding sites and functional phylogenies. Proc Natl Acad Sci U S A (2005) 1.68
Local graph alignment and motif search in biological networks. Proc Natl Acad Sci U S A (2004) 1.56
From fitness landscapes to seascapes: non-equilibrium dynamics of selection and adaptation. Trends Genet (2009) 1.50
Energy-dependent fitness: a quantitative model for the evolution of yeast transcription factor binding sites. Proc Natl Acad Sci U S A (2008) 1.49
Adaptations to fluctuating selection in Drosophila. Proc Natl Acad Sci U S A (2007) 1.45
Clonal interference in the evolution of influenza. Genetics (2012) 1.37
Biodiversity in model ecosystems, I: coexistence conditions for competing species. J Theor Biol (2005) 1.34
Emergent neutrality in adaptive asexual evolution. Genetics (2011) 1.32
Fitness flux and ubiquity of adaptive evolution. Proc Natl Acad Sci U S A (2010) 1.29
Correlated random networks. Phys Rev Lett (2002) 1.04
Biodiversity in model ecosystems, II: species assembly and food web structure. J Theor Biol (2005) 1.03
Molecular evolution under fitness fluctuations. Phys Rev Lett (2008) 1.00
Solvable sequence evolution models and genomic correlations. Phys Rev Lett (2005) 0.99
Nonlinear fitness landscape of a molecular pathway. PLoS Genet (2011) 0.98
Toward an accurate statistics of gapped alignments. Bull Math Biol (2005) 0.87
Formation of regulatory modules by local sequence duplication. PLoS Comput Biol (2011) 0.85
Universality and predictability in molecular quantitative genetics. Curr Opin Genet Dev (2013) 0.82
GraphAlignment: Bayesian pairwise alignment of biological networks. BMC Syst Biol (2012) 0.81
From protein interactions to functional annotation: graph alignment in Herpes. BMC Syst Biol (2008) 0.80
Significance analysis and statistical mechanics: an application to clustering. Phys Rev Lett (2010) 0.76
Fitness landscape for nucleosome positioning. Proc Natl Acad Sci U S A (2013) 0.76
Delocalization transitions of semiflexible manifolds. Phys Rev E Stat Nonlin Soft Matter Phys (2002) 0.75