Published in BMC Genet on July 26, 2004
A general framework for statistical linkage analysis in multivalent tetraploids. Genetics (2005) 1.02
An improved approach for mapping quantitative trait Loci in a pseudo-testcross: revisiting a poplar mapping study. Bioinform Biol Insights (2010) 0.86
Multiallelic epistatic model for an out-bred cross and mapping algorithm of interactive quantitative trait loci. BMC Plant Biol (2011) 0.80
ParentChecker: a computer program for automated inference of missing parental genotype calls and linkage phase correction. BMC Genet (2012) 0.79
Genetic linkage map construction and QTL identification of juvenile growth traits in Torreya grandis. BMC Genet (2014) 0.78
Use of diplotypes - matched haplotype pairs from homologous chromosomes - in gene-disease association studies. Shanghai Arch Psychiatry (2014) 0.77
Model selection for quantitative trait loci mapping in a full-sib family. Genet Mol Biol (2012) 0.76
Maximum likelihood estimates of two-locus recombination fractions under some natural inequality restrictions. BMC Genet (2008) 0.76
Constructing linkage map based on a four-way cross population. (2014) 0.75
Computational identification of genes modulating stem height-diameter allometry. Plant Biotechnol J (2016) 0.75
Constructing the parental linkage phase and the genetic map over distances <1 cM using pooled haploid DNA. Genetics (2005) 0.75
Constructing a linkage-linkage disequilibrium map using dominant-segregating markers. DNA Res (2015) 0.75
New statistical methods for estimation of recombination fractions in F2 population. BMC Bioinformatics (2017) 0.75
MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics (1987) 54.39
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Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudo-testcross: mapping strategy and RAPD markers. Genetics (1994) 6.14
Automated construction of genetic linkage maps using an expert system (MultiMap): a human genome linkage map. Nat Genet (1994) 4.19
Finding the molecular basis of quantitative traits: successes and pitfalls. Nat Rev Genet (2001) 2.88
Estimation of recombination frequencies and construction of RFLP linkage maps in plants from crosses between heterozygous parents. Genetics (1990) 2.57
Simultaneous maximum likelihood estimation of linkage and linkage phases in outcrossing species. Theor Popul Biol (2002) 1.76
Empirical Bayes Gibbs sampling. Biostatistics (2001) 1.50
Linkage mapping of sex-specific differences. Genet Res (2002) 1.17
Improving linkage analysis in outcrossed forest trees - an example from Acacia mangium. Theor Appl Genet (2002) 1.09
Functional mapping of quantitative trait loci underlying the character process: a theoretical framework. Genetics (2002) 2.92
Evaluation of multiple radiographic predictors of cartilage lesions in the hip joints of eight-month-old dogs. Am J Vet Res (2003) 2.09
The Bayesian lasso for genome-wide association studies. Bioinformatics (2010) 1.99
An alternative route to cyclic terpenes by reductive cyclization in iridoid biosynthesis. Nature (2012) 1.65
An entropy-based approach for testing genetic epistasis underlying complex diseases. J Theor Biol (2007) 1.56
Nonparametric modeling of longitudinal covariance structure in functional mapping of quantitative trait loci. Biometrics (2009) 1.54
Complete switchgrass genetic maps reveal subgenome collinearity, preferential pairing and multilocus interactions. Genetics (2010) 1.54
Genome-wide association study of short-acting β2-agonists. A novel genome-wide significant locus on chromosome 2 near ASB3. Am J Respir Crit Care Med (2015) 1.42
A haplotype-based algorithm for multilocus linkage disequilibrium mapping of quantitative trait loci with epistasis. Genetics (2003) 1.31
Molecular linkage maps of the Populus genome. Genome (2002) 1.31
Varying coefficient model for gene-environment interaction: a non-linear look. Bioinformatics (2011) 1.29
A unified framework for mapping quantitative trait loci in bivalent tetraploids using single-dose restriction fragments: a case study from alfalfa. Genome Res (2002) 1.24
Sequencing complex diseases With HapMap. Genetics (2004) 1.22
Quantitative trait loci for hip dysplasia in a cross-breed canine pedigree. Mamm Genome (2005) 1.20
A non-stationary model for functional mapping of complex traits. Bioinformatics (2005) 1.17
A dynamic model for genome-wide association studies. Hum Genet (2011) 1.15
A statistical model for high-resolution mapping of quantitative trait loci determining HIV dynamics. Stat Med (2004) 1.15
Nonparametric functional mapping of quantitative trait loci. Biometrics (2008) 1.14
A general statistical framework for mapping quantitative trait loci in nonmodel systems: issue for characterizing linkage phases. Genetics (2003) 1.12
Functional mapping of human growth trajectories. J Theor Biol (2009) 1.11
A unifying statistical model for QTL mapping of genotype x sex interaction for developmental trajectories. Physiol Genomics (2004) 1.09
Modeling sequence-sequence interactions for drug response. Bioinformatics (2007) 1.08
A regularized regression approach for dissecting genetic conflicts that increase disease risk in pregnancy. Stat Appl Genet Mol Biol (2009) 1.07
A fast algorithm for functional mapping of complex traits. Genetics (2004) 1.07
A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event. BMC Bioinformatics (2006) 1.07
Soy isoflavones alter expression of genes associated with cancer progression, including interleukin-8, in androgen-independent PC-3 human prostate cancer cells. J Nutr (2006) 1.05
A computational approach to the functional clustering of periodic gene-expression profiles. Genetics (2008) 1.04
Functional mapping for genetic control of programmed cell death. Physiol Genomics (2006) 1.04
A semiparametric approach for composite functional mapping of dynamic quantitative traits. Genetics (2007) 1.02
Model for mapping imprinted quantitative trait loci in an inbred F2 design. Genomics (2006) 1.01
Semiparametric functional mapping of quantitative trait loci governing long-term HIV dynamics. Bioinformatics (2007) 1.01
A novel method for identifying nonlinear gene-environment interactions in case-control association studies. Hum Genet (2013) 1.00
Association between CARD15/NOD2 gene polymorphisms and paratuberculosis infection in cattle. Vet Microbiol (2008) 1.00
A general model for multilocus epistatic interactions in case-control studies. PLoS One (2010) 0.99
Differential gene expression in tamoxifen-resistant breast cancer cells revealed by a new analytical model of RNA-Seq data. PLoS One (2012) 0.99
A statistical model for mapping morphological shape. Theor Biol Med Model (2010) 0.98
Modeling extent and distribution of zygotic disequilibrium: implications for a multigenerational canine pedigree. Genetics (2006) 0.97
A non-parametric method for building predictive genetic tests on high-dimensional data. Hum Hered (2011) 0.96
FunMap: functional mapping of complex traits. Bioinformatics (2004) 0.96
How to cluster gene expression dynamics in response to environmental signals. Brief Bioinform (2011) 0.96
Fine particulate air pollution is associated with higher vulnerability to atrial fibrillation--the APACR study. J Toxicol Environ Health A (2011) 0.96
A unified statistical model for functional mapping of environment-dependent genetic expression and genotype x environment interactions for ontogenetic development. Genetics (2004) 0.95
Functional clustering of periodic transcriptional profiles through ARMA(p,q). PLoS One (2010) 0.94
The extent and distribution of linkage disequilibrium in a multi-hierarchic outbred canine pedigree. Mamm Genome (2003) 0.94
Genome-wide association identifies the T gene as a novel asthma pharmacogenetic locus. Am J Respir Crit Care Med (2012) 0.93
A conceptual framework for mapping quantitative trait Loci regulating ontogenetic allometry. PLoS One (2007) 0.93
Exploiting the transcriptome of Euphrates Poplar, Populus euphratica (Salicaceae) to develop and characterize new EST-SSR markers and construct an EST-SSR database. PLoS One (2013) 0.92
Genome-wide association studies for bivariate sparse longitudinal data. Hum Hered (2011) 0.92
Mapping genes for plant structure, development and evolution: functional mapping meets ontology. Trends Genet (2009) 0.92
Reconstructing regulatory networks from the dynamic plasticity of gene expression by mutual information. Nucleic Acids Res (2013) 0.92
A random model for mapping imprinted quantitative trait loci in a structured pedigree: an implication for mapping canine hip dysplasia. Genomics (2007) 0.92
A statistical model for dissecting genomic imprinting through genetic mapping. Genetica (2006) 0.92
Dynamic semiparametric Bayesian models for genetic mapping of complex trait with irregular longitudinal data. Stat Med (2012) 0.91
Functional mapping of drug response with pharmacodynamic-pharmacokinetic principles. Trends Pharmacol Sci (2010) 0.91
Developmental factors responsible for heterosis in aspen hybrids (Populus tremuloides x P. tremula. Tree Physiol (1998) 0.91
Characterization of opaque2 modifier QTLs and candidate genes in recombinant inbred lines derived from the K0326Y quality protein maize inbred. Theor Appl Genet (2010) 0.90
Identification of quantitative trait nucleotides that regulate cancer growth: a simulation approach. J Theor Biol (2006) 0.90
A computational approach for functional mapping of quantitative trait loci that regulate thermal performance curves. PLoS One (2007) 0.90
Mapping haplotype-haplotype interactions with adaptive LASSO. BMC Genet (2010) 0.89
Functional mapping of growth and development. Biol Rev Camb Philos Soc (2009) 0.89
A model for transgenerational imprinting variation in complex traits. PLoS One (2010) 0.89
Estimation of multilocus linkage disequilibria in diploid populations with dominant markers. Genetics (2007) 0.89
Mapping genome-genome epistasis: a high-dimensional model. Bioinformatics (2005) 0.89
Candidate gene polymorphisms (BoIFNG, TLR4, SLC11A1) as risk factors for paratuberculosis infection in cattle. Prev Vet Med (2009) 0.88
A computational framework for the inheritance pattern of genomic imprinting for complex traits. Brief Bioinform (2011) 0.88
Natural variation in petal color in Lycoris longituba revealed by anthocyanin components. PLoS One (2011) 0.88
Two highly validated SSR multiplexes (8-plex) for Euphrates' poplar, Populus euphratica (Salicaceae). Mol Ecol Resour (2012) 0.88
The effect of multiple genetic variants in predicting the risk of type 2 diabetes. BMC Proc (2009) 0.87
3FunMap: full-sib family functional mapping of dynamic traits. Bioinformatics (2011) 0.87
Asymptotic distribution for epistatic tests in case-control studies. Genomics (2011) 0.87
Structured antedependence models for functional mapping of multiple longitudinal traits. Stat Appl Genet Mol Biol (2005) 0.87
Identification of quantitative trait loci that affect endoreduplication in maize endosperm. Theor Appl Genet (2007) 0.87
An improved approach for mapping quantitative trait Loci in a pseudo-testcross: revisiting a poplar mapping study. Bioinform Biol Insights (2010) 0.86
Genetic mapping of allometric scaling laws. Genet Res (2006) 0.86
Deep-sequencing transcriptome analysis of low temperature perception in a desert tree, Populus euphratica. BMC Genomics (2014) 0.86
Rule-based model of vein graft remodeling. PLoS One (2013) 0.86
A dynamic model for functional mapping of biological rhythms. J Biol Dyn (2011) 0.85
A multilocus model for constructing a linkage disequilibrium map in human populations. Stat Appl Genet Mol Biol (2009) 0.85
Wavelet-based parametric functional mapping of developmental trajectories with high-dimensional data. Genetics (2007) 0.85
Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution. BMC Genomics (2012) 0.85
Quantitative genetics of traits associated with hip dysplasia in a canine pedigree constructed by mating dysplastic Labrador Retrievers with unaffected Greyhounds. Am J Vet Res (2002) 0.85
Mapping quantitative trait loci in a non-equilibrium population. Stat Appl Genet Mol Biol (2010) 0.85
A statistical design for testing transgenerational genomic imprinting in natural human populations. PLoS One (2011) 0.85
Wavelet-based functional clustering for patterns of high-dimensional dynamic gene expression. J Comput Biol (2010) 0.85
Hybridization modeling of oligonucleotide SNP arrays for accurate DNA copy number estimation. Nucleic Acids Res (2009) 0.85
Modeling the genetic architecture of complex traits with molecular markers. Recent Pat Nanotechnol (2007) 0.84
Nonparametric functional mapping of quantitative trait loci underlying programmed cell death. Stat Appl Genet Mol Biol (2008) 0.84
A computational model for functional mapping of genes that regulate intra-cellular circadian rhythms. Theor Biol Med Model (2007) 0.84
A computational model for sex-specific genetic architecture of complex traits in humans: implications for mapping pain sensitivity. Mol Pain (2008) 0.83
A statistical model for estimating maternal-zygotic interactions and parent-of-origin effects of QTLs for seed development. PLoS One (2008) 0.83
A unifying framework for bivalent multilocus linkage analysis of allotetraploids. Brief Bioinform (2012) 0.83
A differential equation model for functional mapping of a virus-cell dynamic system. J Math Biol (2009) 0.83
A general model for detecting genetic determinants underlying longitudinal traits with unequally spaced measurements and nonstationary covariance structure. Biostatistics (2005) 0.83
A mathematical framework for functional mapping of complex phenotypes using delay differential equations. J Theor Biol (2011) 0.83
Designs for linkage analysis and association studies of complex diseases. Methods Mol Biol (2010) 0.83
Environmental stress alters genes expression and induces ovule abortion: reactive oxygen species appear as ovules commit to abort. Planta (2005) 0.83
Acute effects of fine particulate air pollution on ST segment height: a longitudinal study. Environ Health (2010) 0.83
Genetic control of juvenile growth and botanical architecture in an ornamental woody plant, Prunus mume Sieb. et Zucc. as revealed by a high-density linkage map. BMC Genet (2014) 0.82
Genetic diversity and population structure of the Tibetan poplar (Populus szechuanica var. tibetica) along an altitude gradient. BMC Genet (2014) 0.82
A statistical model to analyse quantitative trait locus interactions for HIV dynamics from the virus and human genomes. Stat Med (2006) 0.82