Published in Biotechnol Bioeng on September 30, 2004
Phylogenetic comparison of the methanogenic communities from an acidic, oligotrophic fen and an anaerobic digester treating municipal wastewater sludge. Appl Environ Microbiol (2008) 1.62
Retracted Microbial ecology of anaerobic digesters: the key players of anaerobiosis. ScientificWorldJournal (2014) 1.59
The effects from DNA extraction methods on the evaluation of microbial diversity associated with human colonic tissue. Microb Ecol (2010) 0.97
Phenotypic properties and microbial diversity of methanogenic granules from a full-scale upflow anaerobic sludge bed reactor treating brewery wastewater. Appl Environ Microbiol (2006) 0.95
Adaptation of methanogenic communities to the cofermentation of cattle excreta and olive mill wastes at 37 degrees C and 55 degrees C. Appl Environ Microbiol (2010) 0.95
Towards a metagenomic understanding on enhanced biomethane production from waste activated sludge after pH 10 pretreatment. Biotechnol Biofuels (2013) 0.94
Oligonucleotide primers, probes and molecular methods for the environmental monitoring of methanogenic archaea. Microb Biotechnol (2011) 0.93
Persistence of Methanosaeta populations in anaerobic digestion during process instability. J Ind Microbiol Biotechnol (2015) 0.90
Diversity of anaerobic microorganisms involved in long-chain fatty acid degradation in methanogenic sludges as revealed by RNA-based stable isotope probing. Appl Environ Microbiol (2007) 0.87
Searching for links in the biotic characteristics and abiotic parameters of nine different biogas plants. Microb Biotechnol (2012) 0.81
Microbial trophic interactions and mcrA gene expression in monitoring of anaerobic digesters. Front Microbiol (2014) 0.79
Ribosomal intergenic spacer analysis as a tool for monitoring methanogenic Archaea changes in an anaerobic digester. Curr Microbiol (2013) 0.78
Feedstocks affect the diversity and distribution of propionate CoA-transferase genes (pct) in anaerobic digesters. Microb Ecol (2013) 0.76
Process parameters and changes in the microbial community patterns during the first 240 days of an agricultural energy crop digester. AMB Express (2016) 0.75
Microbial Community Shifts during Biogas Production from Biowaste and/or Propionate. Bioengineering (Basel) (2015) 0.75
Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science (2011) 6.93
The ecology and biotechnology of sulphate-reducing bacteria. Nat Rev Microbiol (2008) 3.06
Molecular ecological analysis of the gastrointestinal microbiota: a review. J Nutr (2004) 2.41
PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets. PLoS One (2012) 2.31
A heterozygous moth genome provides insights into herbivory and detoxification. Nat Genet (2013) 2.13
Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics. FEMS Microbiol Rev (2003) 1.94
Hydrogenomics of the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus. Appl Environ Microbiol (2008) 1.85
Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche. Microb Ecol (2010) 1.74
Fate and transport of antibiotic residues and antibiotic resistance genes following land application of manure waste. J Environ Qual (2009) 1.74
Microbiology of synthesis gas fermentation for biofuel production. Curr Opin Biotechnol (2007) 1.74
Evolution and ecology of antibiotic resistance genes. FEMS Microbiol Lett (2007) 1.72
Physiology, ecology, phylogeny, and genomics of microorganisms capable of syntrophic metabolism. Ann N Y Acad Sci (2008) 1.70
Archaeal (per)chlorate reduction at high temperature: an interplay of biotic and abiotic reactions. Science (2013) 1.64
Diversity and dynamics of microbial communities in engineered environments and their implications for process stability. Curr Opin Biotechnol (2003) 1.63
Microbial ecology of drinking water distribution systems. Curr Opin Biotechnol (2006) 1.51
Thermostable enzymes as biocatalysts in the biofuel industry. Adv Appl Microbiol (2010) 1.44
Pyrosequencing-based analysis of the mucosal microbiota in healthy individuals reveals ubiquitous bacterial groups and micro-heterogeneity. PLoS One (2011) 1.38
Substrate and product inhibition of hydrogen production by the extreme thermophile, Caldicellulosiruptor saccharolyticus. Biotechnol Bioeng (2003) 1.37
Description of Sulfurospirillum halorespirans sp. nov., an anaerobic, tetrachloroethene-respiring bacterium, and transfer of Dehalospirillum multivorans to the genus Sulfurospirillum as Sulfurospirillum multivorans comb. nov. Int J Syst Evol Microbiol (2003) 1.36
Thermotoga lettingae sp. nov., a novel thermophilic, methanol-degrading bacterium isolated from a thermophilic anaerobic reactor. Int J Syst Evol Microbiol (2002) 1.34
Transcriptomic analyses of xylan degradation by Prevotella bryantii and insights into energy acquisition by xylanolytic bacteroidetes. J Biol Chem (2010) 1.32
Metabolic flexibility of sulfate-reducing bacteria. Front Microbiol (2011) 1.32
Methanogenic population dynamics during startup of a full-scale anaerobic sequencing batch reactor treating swine waste. Water Res (2002) 1.30
Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes. Mol Microbiol (2010) 1.28
The gut anaerobe Faecalibacterium prausnitzii uses an extracellular electron shuttle to grow at oxic-anoxic interphases. ISME J (2012) 1.24
Bacterial mechanisms to overcome inhibitory effects of dietary tannins. Microb Ecol (2005) 1.23
Novel physiological features of Carboxydothermus hydrogenoformans and Thermoterrabacterium ferrireducens. Appl Environ Microbiol (2004) 1.23
EPSVR and EPMeta: prediction of antigenic epitopes using support vector regression and multiple server results. BMC Bioinformatics (2010) 1.21
Mechanisms of microbial hydrogen disposal in the human colon and implications for health and disease. Annu Rev Food Sci Technol (2010) 1.20
Selective growth of mucolytic bacteria including Clostridium perfringens in a neonatal piglet model of total parenteral nutrition. Am J Clin Nutr (2002) 1.19
Isolation and characterization of Alicycliphilus denitrificans strain BC, which grows on benzene with chlorate as the electron acceptor. Appl Environ Microbiol (2008) 1.19
Phylogenetic analysis of the fecal microbial community in herbivorous land and marine iguanas of the Galápagos Islands using 16S rRNA-based pyrosequencing. ISME J (2011) 1.13
Prediction of antigenic epitopes on protein surfaces by consensus scoring. BMC Bioinformatics (2009) 1.12
Use of DNA and peptide nucleic acid molecular beacons for detection and quantification of rRNA in solution and in whole cells. Appl Environ Microbiol (2003) 1.12
Thorsellia anophelis is the dominant bacterium in a Kenyan population of adult Anopheles gambiae mosquitoes. ISME J (2007) 1.11
Bacterial community structure in the drinking water microbiome is governed by filtration processes. Environ Sci Technol (2012) 1.11
Functional diversity of four glycoside hydrolase family 3 enzymes from the rumen bacterium Prevotella bryantii B14. J Bacteriol (2010) 1.10
Sulfidogenesis under extremely haloalkaline conditions by Desulfonatronospira thiodismutans gen. nov., sp. nov., and Desulfonatronospira delicata sp. nov. - a novel lineage of Deltaproteobacteria from hypersaline soda lakes. Microbiology (2008) 1.10
Diversity and ecophysiological features of thermophilic carboxydotrophic anaerobes. FEMS Microbiol Ecol (2009) 1.09
Syntrophic butyrate and propionate oxidation processes: from genomes to reaction mechanisms. Environ Microbiol Rep (2010) 1.09
Antimicrobial use and resistance in swine waste treatment systems. Appl Environ Microbiol (2006) 1.09
Syntrophic growth on formate: a new microbial niche in anoxic environments. Appl Environ Microbiol (2008) 1.09
The BaeSR two-component regulatory system mediates resistance to condensed tannins in Escherichia coli. Appl Environ Microbiol (2007) 1.08
Biochemical analysis of a beta-D-xylosidase and a bifunctional xylanase-ferulic acid esterase from a xylanolytic gene cluster in Prevotella ruminicola 23. J Bacteriol (2009) 1.08
Microbial community structures in foaming and nonfoaming full-scale wastewater treatment plants. Water Environ Res (2002) 1.08
Purification and characterization of a chlorite dismutase from Pseudomonas chloritidismutans. FEMS Microbiol Lett (2008) 1.08
Novel rumen bacterial diversity in two geographically separated sub-species of reindeer. Microb Ecol (2007) 1.07
Conformational B-cell epitope prediction on antigen protein structures: a review of current algorithms and comparison with common binding site prediction methods. PLoS One (2013) 1.07
Role of filamentous microorganisms in activated sludge foaming: relationship of mycolata levels to foaming initiation and stability. Water Res (2002) 1.06
Relationship between microbial activity and microbial community structure in six full-scale anaerobic digesters. Microbiol Res (2012) 1.04
Reductive dechlorination of beta-hexachlorocyclohexane (beta-HCH) by a Dehalobacter species in coculture with a Sedimentibacter sp. FEMS Microbiol Ecol (2005) 1.04
Biochemical evidence for formate transfer in syntrophic propionate-oxidizing cocultures of Syntrophobacter fumaroxidans and Methanospirillum hungatei. Appl Environ Microbiol (2002) 1.04
Molecular microbial ecology of the gastrointestinal tract: from phylogeny to function. Curr Issues Intest Microbiol (2004) 1.04
Biochemical and mutational analyses of a multidomain cellulase/mannanase from Caldicellulosiruptor bescii. Appl Environ Microbiol (2012) 1.04
Functional analysis of multiple single-stranded DNA-binding proteins from Methanosarcina acetivorans and their effects on DNA synthesis by DNA polymerase BI. J Biol Chem (2003) 1.04
Molecular basis for the selectivity and specificity of ligand recognition by the family 16 carbohydrate-binding modules from Thermoanaerobacterium polysaccharolyticum ManA. J Biol Chem (2007) 1.02
Changes in N-transforming archaea and bacteria in soil during the establishment of bioenergy crops. PLoS One (2011) 1.02
Application of bacteria involved in the biological sulfur cycle for paper mill effluent purification. Sci Total Environ (2008) 1.02
Competition and coexistence of sulfate-reducing bacteria, acetogens and methanogens in a lab-scale anaerobic bioreactor as affected by changing substrate to sulfate ratio. Appl Microbiol Biotechnol (2008) 1.01
Genome sequences of Alicycliphilus denitrificans strains BC and K601T. J Bacteriol (2011) 1.01
The first true obligately syntrophic propionate-oxidizing bacterium, Pelotomaculum schinkii sp. nov., co-cultured with Methanospirillum hungatei, and emended description of the genus Pelotomaculum. Int J Syst Evol Microbiol (2005) 1.01
Comparative analyses of two thermophilic enzymes exhibiting both beta-1,4 mannosidic and beta-1,4 glucosidic cleavage activities from Caldanaerobius polysaccharolyticus. J Bacteriol (2010) 1.00
Desulfotomaculum thermobenzoicum subsp. thermosyntrophicum subsp. nov., a thermophilic, syntrophic, propionate-oxidizing, spore-forming bacterium. Int J Syst Evol Microbiol (2002) 1.00
A vista for microbial ecology and environmental biotechnology. Environ Sci Technol (2006) 1.00
Functional analyses of multiple lichenin-degrading enzymes from the rumen bacterium Ruminococcus albus 8. Appl Environ Microbiol (2011) 1.00
Growth- and substrate-dependent transcription of formate dehydrogenase and hydrogenase coding genes in Syntrophobacter fumaroxidans and Methanospirillum hungatei. Microbiology (2010) 0.98
Evolution of Salmonella enterica virulence via point mutations in the fimbrial adhesin. PLoS Pathog (2012) 0.98
Characterization of the chlorate reductase from Pseudomonas chloritidismutans. J Bacteriol (2003) 0.98
Enrichment of anaerobic methanotrophs in sulfate-reducing membrane bioreactors. Biotechnol Bioeng (2009) 0.98
Dechloromonas hortensis sp. nov. and strain ASK-1, two novel (per)chlorate-reducing bacteria, and taxonomic description of strain GR-1. Int J Syst Evol Microbiol (2005) 0.98
Hydrogen production by hyperthermophilic and extremely thermophilic bacteria and archaea: mechanisms for reductant disposal. Environ Technol (2010) 0.98
Reduced inorganic sulfur oxidation supports autotrophic and mixotrophic growth of Magnetospirillum strain J10 and Magnetospirillum gryphiswaldense. Environ Microbiol (2010) 0.98
Molecular ecological analysis of fecal bacterial populations from term infants fed formula supplemented with selected blends of prebiotics. Appl Environ Microbiol (2008) 0.97
Effect of condensed tannins on bacterial diversity and metabolic activity in the rat gastrointestinal tract. Appl Environ Microbiol (2004) 0.97
Microbial diversity and community structure of a highly active anaerobic methane-oxidizing sulfate-reducing enrichment. Environ Microbiol (2009) 0.97
Heterologous gene expression in filamentous fungi. Adv Appl Microbiol (2012) 0.97
Biochemical analyses of multiple endoxylanases from the rumen bacterium Ruminococcus albus 8 and their synergistic activities with accessory hemicellulose-degrading enzymes. Appl Environ Microbiol (2011) 0.96
(Per)chlorate reduction by the thermophilic bacterium Moorella perchloratireducens sp. nov., isolated from underground gas storage. Appl Environ Microbiol (2007) 0.96
Biochemical and structural insights into xylan utilization by the thermophilic bacterium Caldanaerobius polysaccharolyticus. J Biol Chem (2012) 0.95
Phenotypic properties and microbial diversity of methanogenic granules from a full-scale upflow anaerobic sludge bed reactor treating brewery wastewater. Appl Environ Microbiol (2006) 0.95
Synergistic effect of folate-mediated targeting and verapamil-mediated P-gp inhibition with paclitaxel -polymer micelles to overcome multi-drug resistance. Biomaterials (2011) 0.95
TNF-alpha sensitizes HT-29 colonic epithelial cells to intestinal lactobacilli. Exp Biol Med (Maywood) (2002) 0.95
Soehngenia saccharolytica gen. nov., sp. nov. and Clostridium amygdalinum sp. nov., two novel anaerobic, benzaldehyde-converting bacteria. Int J Syst Evol Microbiol (2003) 0.95
Increasing the oxidative stress response allows Escherichia coli to overcome inhibitory effects of condensed tannins. Appl Environ Microbiol (2003) 0.94
Effect of growth conditions on inactivation of Escherichia coli with monochloramine. Environ Sci Technol (2009) 0.94
Monitoring airborne biotic contaminants in the indoor environment of pig and poultry confinement buildings. Environ Microbiol (2012) 0.94
Co-existence of physiologically similar sulfate-reducing bacteria in a full-scale sulfidogenic bioreactor fed with a single organic electron donor. Appl Microbiol Biotechnol (2007) 0.93
Direct inhibition of methanogenesis by ferric iron. FEMS Microbiol Ecol (2004) 0.93
Halomonas sulfidaeris-dominated microbial community inhabits a 1.8 km-deep subsurface Cambrian Sandstone reservoir. Environ Microbiol (2013) 0.93
A strictly anaerobic betaproteobacterium Georgfuchsia toluolica gen. nov., sp. nov. degrades aromatic compounds with Fe(III), Mn(IV) or nitrate as an electron acceptor. FEMS Microbiol Ecol (2009) 0.92
Biochemical and mutational analyses of a unique clamp loader complex in the archaeon Methanosarcina acetivorans. J Biol Chem (2005) 0.92
Two W-containing formate dehydrogenases (CO2-reductases) involved in syntrophic propionate oxidation by Syntrophobacter fumaroxidans. Eur J Biochem (2003) 0.92
Evaluation of swine-specific PCR assays used for fecal source tracking and analysis of molecular diversity of swine-specific "bacteroidales" populations. Appl Environ Microbiol (2009) 0.92
Syntrophomonas zehnderi sp. nov., an anaerobe that degrades long-chain fatty acids in co-culture with Methanobacterium formicicum. Int J Syst Evol Microbiol (2007) 0.92
A new planning and design paradigm to achieve sustainable resource recovery from wastewater. Environ Sci Technol (2009) 0.92
Desulfotomaculum carboxydivorans sp. nov., a novel sulfate-reducing bacterium capable of growth at 100% CO. Int J Syst Evol Microbiol (2005) 0.91
Effect of methanogenic substrates on anaerobic oxidation of methane and sulfate reduction by an anaerobic methanotrophic enrichment. Appl Microbiol Biotechnol (2010) 0.91
Oridonin nanosuspension enhances anti-tumor efficacy in SMMC-7721 cells and H22 tumor bearing mice. Colloids Surf B Biointerfaces (2011) 0.91
Desulfosporosinus acididurans sp. nov.: an acidophilic sulfate-reducing bacterium isolated from acidic sediments. Extremophiles (2014) 0.91