Published in J Am Soc Mass Spectrom on February 01, 2005
The RNA Modification Database, RNAMDB: 2011 update. Nucleic Acids Res (2010) 3.42
Effects of select anions from the Hofmeister series on the gas-phase conformations of protein ions measured with traveling-wave ion mobility spectrometry/mass spectrometry. J Am Soc Mass Spectrom (2011) 0.96
Hybrid activation methods for elucidating nucleic acid modifications. Anal Chem (2010) 0.86
Characterization of oligodeoxynucleotides and modifications by 193 nm photodissociation and electron photodetachment dissociation. Anal Chem (2010) 0.85
The RNA Modification Database, RNAMDB: 2011 update. Nucleic Acids Res (2010) 3.42
An IMS-IMS analogue of MS-MS. Anal Chem (2006) 2.68
Biomolecule analysis by ion mobility spectrometry. Annu Rev Anal Chem (Palo Alto Calif) (2008) 1.89
Complex interactions of HIV-1 nucleocapsid protein with oligonucleotides. Nucleic Acids Res (2006) 1.47
Evidence for many resolvable structures within conformation types of electrosprayed ubiquitin ions. J Phys Chem B (2006) 1.39
Resolving and assigning N-linked glycan structural isomers from ovalbumin by IMS-MS. J Am Soc Mass Spectrom (2008) 1.37
Resistance to RevM10 inhibition reflects a conformational switch in the HIV-1 Rev response element. Proc Natl Acad Sci U S A (2008) 1.22
Conversions of formaldehyde-modified 2'-deoxyadenosine 5'-monophosphate in conditions modeling formalin-fixed tissue dehydration. J Histochem Cytochem (2005) 1.21
Direct mass spectrometric determination of the stoichiometry and binding affinity of the complexes between nucleocapsid protein and RNA stem-loop hairpins of the HIV-1 Psi-recognition element. Biochemistry (2003) 1.15
Transfer of structural elements from compact to extended states in unsolvated ubiquitin. J Am Chem Soc (2006) 1.15
Top-down characterization of nucleic acids modified by structural probes using high-resolution tandem mass spectrometry and automated data interpretation. Anal Chem (2004) 1.10
MS3D structural elucidation of the HIV-1 packaging signal. Proc Natl Acad Sci U S A (2008) 1.10
Prospective type 1 and type 2 disulfides of Keap1 protein. Chem Res Toxicol (2008) 1.09
Dissecting the protein-RNA and RNA-RNA interactions in the nucleocapsid-mediated dimerization and isomerization of HIV-1 stemloop 1. J Mol Biol (2006) 1.03
Untying the FIV frameshifting pseudoknot structure by MS3D. J Mol Biol (2005) 1.03
Elucidating the higher-order structure of biopolymers by structural probing and mass spectrometry: MS3D. J Mass Spectrom (2010) 1.00
Direct probing of RNA structures and RNA-protein interactions in the HIV-1 packaging signal by chemical modification and electrospray ionization fourier transform mass spectrometry. J Mol Biol (2003) 0.98
Understanding the isomerization of the HIV-1 dimerization initiation domain by the nucleocapsid protein. J Mol Biol (2007) 0.97
SHAMS: combining chemical modification of RNA with mass spectrometry to examine polypurine tract-containing RNA/DNA hybrids. RNA (2009) 0.95
Structural probing of the HIV-1 polypurine tract RNA:DNA hybrid using classic nucleic acid ligands. Nucleic Acids Res (2008) 0.94
Inhibitory effects of archetypical nucleic acid ligands on the interactions of HIV-1 nucleocapsid protein with elements of Psi-RNA. Nucleic Acids Res (2006) 0.93
The collaboratory for MS3D: a new cyberinfrastructure for the structural elucidation of biological macromolecules and their assemblies using mass spectrometry-based approaches. J Proteome Res (2008) 0.93
Toward building a database of bifunctional probes for the MS3D investigation of nucleic acids structures. J Am Soc Mass Spectrom (2006) 0.91
Mapping noncovalent ligand binding to stemloop domains of the HIV-1 packaging signal by tandem mass spectrometry. J Am Soc Mass Spectrom (2006) 0.91
A simple and robust method for determining the number of basic sites in peptides and proteins using electrospray ionization mass spectrometry. Anal Chem (2011) 0.89
Nested Arg-specific bifunctional crosslinkers for MS-based structural analysis of proteins and protein assemblies. Anal Chim Acta (2008) 0.89
Solution dependence of the collisional activation of ubiquitin [M + 7H](7+) ions. J Am Soc Mass Spectrom (2014) 0.87
Clerocidin alkylates DNA through its epoxide function: evidence for a fine tuned mechanism of action. Nucleic Acids Res (2003) 0.86
The essential role of stacking adenines in a two-base-pair RNA kissing complex. J Am Chem Soc (2013) 0.86
Noncovalent probes for the investigation of structure and dynamics of protein-nucleic acid assemblies: the case of NC-mediated dimerization of genomic RNA in HIV-1. Biopolymers (2009) 0.86
Toward multiplexing the application of solvent accessibility probes for the investigation of RNA three-dimensional structures by electrospray ionization-Fourier transform mass spectrometry. Anal Biochem (2004) 0.86
Identification of a novel non-carbohydrate molecule that binds to the ribosomal A-site RNA. Bioorg Med Chem Lett (2004) 0.85
Like polarity ion/ion reactions enable the investigation of specific metal interactions in nucleic acids and their noncovalent assemblies. J Am Chem Soc (2008) 0.83
Alkylation of nucleic acids by the antitumor agent COMC. Org Lett (2002) 0.82
Concerted bis-alkylating reactivity of clerocidin towards unpaired cytosine residues in DNA. Nucleic Acids Res (2004) 0.82
Anion effects on sodium ion and acid molecule adduction to protein ions in electrospray ionization mass spectrometry. J Am Soc Mass Spectrom (2011) 0.82
Probing anomalous structural features in polypurine tract-containing RNA-DNA hybrids with neomycin B. Biochemistry (2009) 0.82
Rapid purification of RNA secondary structures. Nucleic Acids Res (2003) 0.81
Direct infusion analysis of nucleotide mixtures of very similar or identical elemental composition. J Mass Spectrom (2013) 0.81
Effects of common buffer systems on drug activity: the case of clerocidin. Chem Res Toxicol (2004) 0.80
Split-field drift tube/mass spectrometry and isotopic labeling techniques for determination of single amino acid polymorphisms. J Proteome Res (2006) 0.79
Measuring the binding stoichiometry of HIV-1 Gag to very-low-density oligonucleotide surfaces using surface plasmon resonance spectroscopy. J Biomol Tech (2007) 0.79
Mass spectrometric investigation of protein alkylation by the RNA footprinting probe kethoxal. J Mass Spectrom (2005) 0.78
Atmospheric pressure MALDI-fourier transform mass spectrometry. Anal Chem (2004) 0.77
Current-controlled nanospray ionization mass spectrometry. J Am Soc Mass Spectrom (2009) 0.77
Evidence for spontaneous resolution of icosahedral proline. J Am Chem Soc (2006) 0.76
Effects of metal ion adduction on the gas-phase conformations of protein ions. J Am Soc Mass Spectrom (2013) 0.76
Erratum: Profiling ribonucleotide modifications at full-transcriptome level: a step toward MS-based epitranscriptomics. RNA (2015) 0.75
Structure-specific ribonucleases for MS-based elucidation of higher-order RNA structure. J Am Soc Mass Spectrom (2014) 0.75
Dissecting reactivity of clerocidin toward common buffer systems by means of selected drug analogues. Chem Res Toxicol (2005) 0.75