A comprehensive radiation hybrid map of the bovine genome comprising 5593 loci.

PubWeight™: 1.41‹?› | Rank: Top 5%

🔗 View Article (PMID 15780744)

Published in Genomics on April 01, 2005

Authors

Tomohito Itoh1, Toshio Watanabe, Naoya Ihara, Paola Mariani, Craig W Beattie, Yoshikazu Sugimoto, Akiko Takasuga

Author Affiliations

1: Shirakawa Institute of Animal Genetics, Odakura, Nishigo, Nishi-shirakawa, Fukushima 961-8061, Japan.

Articles citing this

A high-resolution whole-genome cattle-human comparative map reveals details of mammalian chromosome evolution. Proc Natl Acad Sci U S A (2005) 2.62

AnimalQTLdb: a livestock QTL database tool set for positional QTL information mining and beyond. Nucleic Acids Res (2006) 2.22

A physical map of the bovine genome. Genome Biol (2007) 1.56

Construction of bovine whole-genome radiation hybrid and linkage maps using high-throughput genotyping. Anim Genet (2007) 1.49

High resolution radiation hybrid maps of bovine chromosomes 19 and 29: comparison with the bovine genome sequence assembly. BMC Genomics (2007) 1.37

Database of cattle candidate genes and genetic markers for milk production and mastitis. Anim Genet (2009) 1.27

Identification of bovine QTL for growth and carcass traits in Japanese Black cattle by replication and identical-by-descent mapping. Mamm Genome (2007) 1.17

Multidirectional cross-species painting illuminates the history of karyotypic evolution in Perissodactyla. Chromosome Res (2008) 1.14

A genome-wide map of human genetic interactions inferred from radiation hybrid genotypes. Genome Res (2010) 1.07

Comparative genome maps of the pangolin, hedgehog, sloth, anteater and human revealed by cross-species chromosome painting: further insight into the ancestral karyotype and genome evolution of eutherian mammals. Chromosome Res (2006) 1.03

A gene-based high-resolution comparative radiation hybrid map as a framework for genome sequence assembly of a bovine chromosome 6 region associated with QTL for growth, body composition, and milk performance traits. BMC Genomics (2006) 1.03

High-resolution comparative mapping among man, cattle and mouse suggests a role for repeat sequences in mammalian genome evolution. BMC Genomics (2006) 1.03

A second generation radiation hybrid map to aid the assembly of the bovine genome sequence. BMC Genomics (2006) 0.99

A 4,103 marker integrated physical and comparative map of the horse genome. Cytogenet Genome Res (2008) 0.96

JY-1, an oocyte-specific gene, regulates granulosa cell function and early embryonic development in cattle. Proc Natl Acad Sci U S A (2007) 0.94

A second generation genetic map of the bumblebee Bombus terrestris (Linnaeus, 1758) reveals slow genome and chromosome evolution in the Apidae. BMC Genomics (2011) 0.94

A high resolution radiation hybrid map of bovine chromosome 14 identifies scaffold rearrangement in the latest bovine assembly. BMC Genomics (2007) 0.92

A high resolution RH map of the bovine major histocompatibility complex. BMC Genomics (2009) 0.89

A complete DNA sequence map of the ovine major histocompatibility complex. BMC Genomics (2010) 0.88

Cross-species chromosome painting among camel, cattle, pig and human: further insights into the putative Cetartiodactyla ancestral karyotype. Chromosome Res (2007) 0.87

Effects of genome-wide copy number variation on expression in mammalian cells. BMC Genomics (2011) 0.85

Advanced technologies for genomic analysis in farm animals and its application for QTL mapping. Genetica (2008) 0.82

Novel transcripts discovered by mining genomic DNA from defined regions of bovine chromosome 6. BMC Genomics (2009) 0.80

Fine-mapping and candidate gene analysis of bovine spinal muscular atrophy. Mamm Genome (2006) 0.79

Generation of an improved cytogenetic and comparative map of Bos taurus chromosome BTA27. Chromosome Res (2007) 0.79

Identification of a two-marker-haplotype on Bos taurus autosome 18 associated with somatic cell score in German Holstein cattle. BMC Genet (2009) 0.78

A clone-free, single molecule map of the domestic cow (Bos taurus) genome. BMC Genomics (2015) 0.76

Articles by these authors

The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science (2009) 8.23

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science (2009) 7.64

Analyses of pig genomes provide insight into porcine demography and evolution. Nature (2012) 5.58

Differential expression patterns of claudins, tight junction membrane proteins, in mouse nephron segments. J Am Soc Nephrol (2002) 2.59

A comprehensive genetic map of the cattle genome based on 3802 microsatellites. Genome Res (2004) 2.38

Use of three-dimensional computed tomographic angiography of pulmonary vessels for lung resections. Ann Thorac Surg (2003) 2.03

A prospective, single-blind trial comparing wireless capsule endoscopy and double-balloon enteroscopy in patients with obscure gastrointestinal bleeding. J Gastroenterol (2008) 2.02

C421A polymorphism in the human breast cancer resistance protein gene is associated with low expression of Q141K protein and low-level drug resistance. Mol Cancer Ther (2002) 1.95

Prevalence of overlaps between GERD, FD and IBS and impact on health-related quality of life. J Gastroenterol Hepatol (2010) 1.80

AVEREL: a randomized phase III Trial evaluating bevacizumab in combination with docetaxel and trastuzumab as first-line therapy for HER2-positive locally recurrent/metastatic breast cancer. J Clin Oncol (2013) 1.77

Present status and strategy of NSAIDs-induced small bowel injury. J Gastroenterol (2009) 1.70

Spontaneous hemothorax in neurofibromatosis treated with percutaneous embolization. Cardiovasc Intervent Radiol (2007) 1.64

Transport of methotrexate, methotrexate polyglutamates, and 17beta-estradiol 17-(beta-D-glucuronide) by ABCG2: effects of acquired mutations at R482 on methotrexate transport. Cancer Res (2003) 1.62

Association between gastroesophageal flap valve, reflux esophagitis, Barrett's epithelium, and atrophic gastritis assessed by endoscopy in Japanese patients. J Gastroenterol (2003) 1.55

Cross-breed comparisons identified a critical 591-kb region for bovine carcass weight QTL (CW-2) on chromosome 6 and the Ile-442-Met substitution in NCAPG as a positional candidate. BMC Genet (2009) 1.47

Positional cloning of the gene LIMBIN responsible for bovine chondrodysplastic dwarfism. Proc Natl Acad Sci U S A (2002) 1.42

Falsely elevated tacrolimus concentrations measured using the ACMIA method due to circulating endogenous antibodies in a kidney transplant recipient. Clin Chim Acta (2010) 1.40

Possible involvement of adrenomedullin in lipopolysaccharide-induced small-intestinal motility changes in conscious rats. J Gastroenterol (2005) 1.39

Horse bone marrow mesenchymal stem cells express embryo stem cell markers and show the ability for tenogenic differentiation by in vitro exposure to BMP-12. BMC Cell Biol (2009) 1.35

Dissection of genetic factors modulating fetal growth in cattle indicates a substantial role of the non-SMC condensin I complex, subunit G (NCAPG) gene. Genetics (2009) 1.34

Distal colorectal cancers with microsatellite instability (MSI) display distinct gene expression profiles that are different from proximal MSI cancers. Cancer Res (2006) 1.32

Identification and functional characterization of paxillin as a target of protein tyrosine phosphatase receptor T. Proc Natl Acad Sci U S A (2010) 1.30

Inhibition of the mitogen-activated protein kinase pathway results in the down-regulation of P-glycoprotein. Mol Cancer Ther (2007) 1.30

Results of wedge resection for focal bronchioloalveolar carcinoma showing pure ground-glass attenuation on computed tomography. Ann Thorac Surg (2002) 1.29

Dominant-negative inhibition of breast cancer resistance protein as drug efflux pump through the inhibition of S-S dependent homodimerization. Int J Cancer (2002) 1.29

Genome-wide association study identified three major QTL for carcass weight including the PLAG1-CHCHD7 QTN for stature in Japanese Black cattle. BMC Genet (2012) 1.28

The Runx1 transcription factor inhibits the differentiation of naive CD4+ T cells into the Th2 lineage by repressing GATA3 expression. J Exp Med (2003) 1.28

A mutant receptor tyrosine phosphatase, CD148, causes defects in vascular development. Mol Cell Biol (2003) 1.27

Breast cancer resistance protein exports sulfated estrogens but not free estrogens. Mol Pharmacol (2003) 1.26

ABCG2 transports sulfated conjugates of steroids and xenobiotics. J Biol Chem (2003) 1.24

p53-defective tumors with a functional apoptosome-mediated pathway: a new therapeutic target. J Natl Cancer Inst (2005) 1.23

Gefitinib reverses breast cancer resistance protein-mediated drug resistance. Mol Cancer Ther (2004) 1.22

Functions of the breast cancer resistance protein (BCRP/ABCG2) in chemotherapy. Adv Drug Deliv Rev (2008) 1.21

Phytoestrogens/flavonoids reverse breast cancer resistance protein/ABCG2-mediated multidrug resistance. Cancer Res (2004) 1.20

Effect of chronic stress on gastric emptying and plasma ghrelin levels in rats. Life Sci (2008) 1.20

Management of gastric fundal varices without gastro-renal shunt in 15 patients. World J Gastroenterol (2008) 1.19

15th anniversary of rebamipide: looking ahead to the new mechanisms and new applications. Dig Dis Sci (2005) 1.19

Overexpression of the Runx3 transcription factor increases the proportion of mature thymocytes of the CD8 single-positive lineage. J Immunol (2005) 1.17

Identification of bovine QTL for growth and carcass traits in Japanese Black cattle by replication and identical-by-descent mapping. Mamm Genome (2007) 1.17

Exogenous administration of mesenchymal stem cells ameliorates dextran sulfate sodium-induced colitis via anti-inflammatory action in damaged tissue in rats. Life Sci (2008) 1.16

Prevalence of gastroesophageal reflux disease and gastroesophageal reflux disease symptoms in Japan. J Gastroenterol Hepatol (2005) 1.16

A first-generation EST RH comparative map of the porcine and human genome. Mamm Genome (2002) 1.15

Noncationic peptides obtained from azurin preferentially enter cancer cells. Cancer Res (2009) 1.15

Increased expression of cytokines and adhesion molecules in rat chronic esophagitis. Digestion (2003) 1.11

Risk factors for bleeding after endoscopic mucosal resection. World J Gastroenterol (2005) 1.10

Differences in clinical characteristics between patients with endoscopy-negative reflux disease and erosive esophagitis in Japan. Am J Gastroenterol (2005) 1.10

Feasibility, safety, and efficacy of the Stretta procedure in Japanese patients with gastroesophageal reflux disease: first report from Asia. J Gastroenterol (2007) 1.10

Transcriptional analysis of calcium-dependent and calcium-independent signalling pathways induced by oligogalacturonides. J Exp Bot (2006) 1.10

Estrogen-mediated post transcriptional down-regulation of breast cancer resistance protein/ABCG2. Cancer Res (2005) 1.09

A novel GTPase-activating protein for ARF6 directly interacts with clathrin and regulates clathrin-dependent endocytosis. Mol Biol Cell (2005) 1.09

A radiation hybrid map for the bovine Y Chromosome. Mamm Genome (2002) 1.09

A first generation whole genome RH map of the river buffalo with comparison to domestic cattle. BMC Genomics (2008) 1.08

A diffusible signal from arbuscular mycorrhizal fungi elicits a transient cytosolic calcium elevation in host plant cells. Plant Physiol (2006) 1.08

Single amino acid substitutions in the transmembrane domains of breast cancer resistance protein (BCRP) alter cross resistance patterns in transfectants. Int J Cancer (2003) 1.08

Endoplasmic reticulum stress-induced programmed cell death in soybean cells. J Cell Sci (2004) 1.08

AP-1 and colorectal cancer. Inflammopharmacology (2005) 1.07

Anti-inflammatory effects of IL-17A on Helicobacter pylori-induced gastritis. Biochem Biophys Res Commun (2009) 1.06

Metabolomic profiles indicate distinct physiological pathways affected by two loci with major divergent effect on Bos taurus growth and lipid deposition. Physiol Genomics (2010) 1.04

Identification of cytochrome P450s required for fumitremorgin biosynthesis in Aspergillus fumigatus. Chembiochem (2009) 1.03

Breast cancer resistance protein (BCRP/ABCG2) induces cellular resistance to HIV-1 nucleoside reverse transcriptase inhibitors. Mol Pharmacol (2003) 1.03

SMAP2, a novel ARF GTPase-activating protein, interacts with clathrin and clathrin assembly protein and functions on the AP-1-positive early endosome/trans-Golgi network. Mol Biol Cell (2006) 1.03

Substrate-dependent bidirectional modulation of P-glycoprotein-mediated drug resistance by erlotinib. Cancer Sci (2009) 1.03

Reduction of 15-hydroxyprostaglandin dehydrogenase expression is an independent predictor of poor survival associated with enhanced cell proliferation in gastric adenocarcinoma. Cancer Sci (2009) 1.03

Functional SNPs of the breast cancer resistance protein-therapeutic effects and inhibitor development. Cancer Lett (2005) 1.02

Association between dinner-to-bed time and gastro-esophageal reflux disease. Am J Gastroenterol (2005) 1.02

Napthalimidobenzamide DB-51630: a novel DNA binding agent inducing p300 gene expression and exerting a potent anti-cancer activity. Bioorg Med Chem (2005) 1.01

Clathrin dependent endocytosis of E-cadherin is regulated by the Arf6GAP isoform SMAP1. Exp Cell Res (2007) 1.01

Morpholino antisense oligonucleotide-mediated gene knockdown during thymocyte development reveals role for Runx3 transcription factor in CD4 silencing during development of CD4-/CD8+ thymocytes. J Immunol (2003) 1.01

Gene expression signature and the prediction of ulcerative colitis-associated colorectal cancer by DNA microarray. Clin Cancer Res (2007) 1.01

Role of Cys-603 in dimer/oligomer formation of the breast cancer resistance protein BCRP/ABCG2. Cancer Sci (2005) 1.01

Reasons for the delays in the definitive diagnosis of lung cancer for more than one year from the recognition of abnormal chest shadows. Intern Med (2002) 1.01

A cell penetrating peptide derived from azurin inhibits angiogenesis and tumor growth by inhibiting phosphorylation of VEGFR-2, FAK and Akt. Angiogenesis (2011) 1.00

Acyl-CoA synthetase as a cancer survival factor: its inhibition enhances the efficacy of etoposide. Cancer Sci (2009) 0.99

Estrone and 17beta-estradiol reverse breast cancer resistance protein-mediated multidrug resistance. Jpn J Cancer Res (2002) 0.97

Dofequidar fumarate sensitizes cancer stem-like side population cells to chemotherapeutic drugs by inhibiting ABCG2/BCRP-mediated drug export. Cancer Sci (2009) 0.97

The role of calcium in oligogalacturonide-activated signalling in soybean cells. Planta (2002) 0.96

High mobility group box 1 promotes small intestinal damage induced by nonsteroidal anti-inflammatory drugs through Toll-like receptor 4. Am J Pathol (2012) 0.96

Filamin A-bound PEBP2beta/CBFbeta is retained in the cytoplasm and prevented from functioning as a partner of the Runx1 transcription factor. Mol Cell Biol (2005) 0.96

SEK1/MKK4-mediated SAPK/JNK signaling participates in embryonic hepatoblast proliferation via a pathway different from NF-kappaB-induced anti-apoptosis. Dev Biol (2002) 0.96

Pathogenesis of proton-pump inhibitor-refractory non-erosive reflux disease according to multichannel intraluminal impedance-pH monitoring. J Gastroenterol Hepatol (2012) 0.96

Susceptibility of different chicken lines to H7N1 highly pathogenic avian influenza virus and the role of Mx gene polymorphism coding amino acid position 631. Virology (2008) 0.96

Evidence that bovine forebrain embryonic zinc finger-like gene influences immune response associated with mastitis resistance. Proc Natl Acad Sci U S A (2006) 0.95

Genome-wide screening of loci associated with drug resistance to 5-fluorouracil-based drugs. Cancer Sci (2007) 0.95

Identification of a 1.1-Mb region for a carcass weight QTL onbovine Chromosome 14. Mamm Genome (2005) 0.95

The usefulness of double-balloon enteroscopy in gastrointestinal stromal tumors of the small bowel with obscure gastrointestinal bleeding. Intern Med (2012) 0.95

Quality of ulcer healing in gastrointestinal tract: its pathophysiology and clinical relevance. World J Gastroenterol (2012) 0.95