Published in BMC Bioinformatics on March 24, 2005
The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information. Database (Oxford) (2010) 4.66
Ergatis: a web interface and scalable software system for bioinformatics workflows. Bioinformatics (2010) 2.69
XML schemas for common bioinformatic data types and their application in workflow systems. BMC Bioinformatics (2006) 1.33
High-throughput bioinformatics with the Cyrille2 pipeline system. BMC Bioinformatics (2008) 1.31
BioWMS: a web-based Workflow Management System for bioinformatics. BMC Bioinformatics (2007) 1.18
WGS Analysis and Interpretation in Clinical and Public Health Microbiology Laboratories: What Are the Requirements and How Do Existing Tools Compare? Pathogens (2014) 1.02
WebLab: a data-centric, knowledge-sharing bioinformatic platform. Nucleic Acids Res (2009) 1.00
Bio-jETI: a framework for semantics-based service composition. BMC Bioinformatics (2009) 0.98
High-Performance Integrated Virtual Environment (HIVE) Tools and Applications for Big Data Analysis. Genes (Basel) (2014) 0.87
SWS: accessing SRS sites contents through Web Services. BMC Bioinformatics (2008) 0.84
Comparative phyloinformatics of virus genes at micro and macro levels in a distributed computing environment. BMC Bioinformatics (2008) 0.79
EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet (2000) 69.26
Taverna: a tool for the composition and enactment of bioinformatics workflows. Bioinformatics (2004) 13.46
Parameter estimation in biochemical pathways: a comparison of global optimization methods. Genome Res (2003) 5.50
Biopipe: a flexible framework for protocol-based bioinformatics analysis. Genome Res (2003) 3.45
The design of Jemboss: a graphical user interface to EMBOSS. Bioinformatics (2003) 2.22
Predicting allergenic proteins using wavelet transform. Bioinformatics (2004) 1.21
Rapid detection of conserved regions in protein sequences using wavelets. In Silico Biol (2004) 0.91
The Human Intermediate Filament Database: comprehensive information on a gene family involved in many human diseases. Hum Mutat (2008) 1.97
pSLIP: SVM based protein subcellular localization prediction using multiple physicochemical properties. BMC Bioinformatics (2005) 1.49
A topologically related singularity suggests a maximum preferred size for protein domains. Proteins (2007) 1.49
An entropy-based gene selection method for cancer classification using microarray data. BMC Bioinformatics (2005) 1.32
Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multiple support vector machines. BMC Bioinformatics (2005) 1.28
Predicting allergenic proteins using wavelet transform. Bioinformatics (2004) 1.21
Active scheduling of organ detection and segmentation in whole-body medical images. Med Image Comput Comput Assist Interv (2008) 1.19
Robust anisotropic Gaussian fitting for volumetric characterization of pulmonary nodules in multislice CT. IEEE Trans Med Imaging (2005) 1.16
WebAllergen: a web server for predicting allergenic proteins. Bioinformatics (2005) 1.15
Large-scale dynamic gene regulatory network inference combining differential equation models with local dynamic Bayesian network analysis. Bioinformatics (2011) 1.07
Segmentation of pulmonary nodules of various densities with morphological approaches and convexity models. Med Image Anal (2010) 1.03
Hierarchical segmentation and identification of thoracic vertebra using learning-based edge detection and coarse-to-fine deformable model. Med Image Comput Comput Assist Interv (2010) 1.02
Grid cellware: the first grid-enabled tool for modelling and simulating cellular processes. Bioinformatics (2004) 0.99
Singapore Human Mutation/Polymorphism Database: a country-specific database for mutations and polymorphisms in inherited disorders and candidate gene association studies. Hum Mutat (2006) 0.98
Multi-level ground glass nodule detection and segmentation in CT lung images. Med Image Comput Comput Assist Interv (2009) 0.97
Robust automatic knee MR slice positioning through redundant and hierarchical anatomy detection. IEEE Trans Med Imaging (2011) 0.95
Robust learning-based parsing and annotation of medical radiographs. IEEE Trans Med Imaging (2010) 0.94
Rapid detection of conserved regions in protein sequences using wavelets. In Silico Biol (2004) 0.91
Entropic criteria for protein folding derived from recurrences: six residues patch as the basic protein word. FEBS Lett (2006) 0.86
iHAP--integrated haplotype analysis pipeline for characterizing the haplotype structure of genes. BMC Bioinformatics (2006) 0.81
Substrate specificity of cyclins determined by electrostatics. Cell Cycle (2007) 0.79
Alternatively spliced human genes by exon skipping--a database (ASHESdb). In Silico Biol (2004) 0.79
Gastric Cancer (Biomarkers) Knowledgebase (GCBKB): A Curated and Fully Integrated Knowledgebase of Putative Biomarkers Related to Gastric Cancer. Biomark Insights (2007) 0.78
GANDivAWeb: a web server for detecting early folding units ("foldons") from protein 3D structures. BMC Struct Biol (2008) 0.76
Candidate List of yoUr Biomarker (CLUB): A Web-based Platform to Aid Cancer Biomarker Research. Biomark Insights (2008) 0.76
Endovascular Reperfusion and Cooling in Cerebral Acute Ischemia (ReCCLAIM I). J Neurointerv Surg (2013) 0.75
GeNESiS: gene network evolution simulation software. BMC Bioinformatics (2008) 0.75
CMDWave: conserved motifs detection using wavelets. In Silico Biol (2005) 0.75
Multiresolution analysis uncovers hidden conservation of properties in structurally and functionally similar proteins. J Bioinform Comput Biol (2006) 0.75