Global gene expression analysis of two Streptococcus thermophilus bacteriophages using DNA microarray.

PubWeight™: 1.74‹?› | Rank: Top 3%

🔗 View Article (PMID 16043205)

Published in Virology on September 30, 2005

Authors

Martin Duplessis1, W Michael Russell, Dennis A Romero, Sylvain Moineau

Author Affiliations

1: Département de biochimie et de microbiologie, Faculté des sciences et de génie, Université Laval, Québec City, Canada.

Articles citing this

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature (2010) 14.21

Phage response to CRISPR-encoded resistance in Streptococcus thermophilus. J Bacteriol (2007) 13.67

Cleavage of phage DNA by the Streptococcus thermophilus CRISPR3-Cas system. PLoS One (2012) 3.16

Strong bias in the bacterial CRISPR elements that confer immunity to phage. Nat Commun (2013) 1.55

The population and evolutionary dynamics of phage and bacteria with CRISPR-mediated immunity. PLoS Genet (2013) 1.41

Global changes in cellular gene expression during bacteriophage PRD1 infection. J Virol (2006) 1.13

Phage-induced expression of CRISPR-associated proteins is revealed by shotgun proteomics in Streptococcus thermophilus. PLoS One (2012) 1.07

Temporal regulation of viral transcription during development of Thermus thermophilus bacteriophage phiYS40. J Mol Biol (2006) 0.99

Phage encoded H-NS: a potential achilles heel in the bacterial defence system. PLoS One (2011) 0.98

Unraveling lactococcal phage baseplate assembly by mass spectrometry. Mol Cell Proteomics (2011) 0.98

CRISPR-Cas: an efficient tool for genome engineering of virulent bacteriophages. Nucleic Acids Res (2014) 0.96

Global transcriptional responses of Pseudomonas aeruginosa to phage PRR1 infection. J Virol (2007) 0.87

Complete Genome Sequence of Streptococcus thermophilus SMQ-301, a Model Strain for Phage-Host Interactions. Genome Announc (2015) 0.79

Multilocus sequence typing scheme for the characterization of 936-like phages infecting Lactococcus lactis. Appl Environ Microbiol (2012) 0.79

Characterization of two polyvalent phages infecting Enterobacteriaceae. Sci Rep (2017) 0.75

Articles by these authors

CRISPR provides acquired resistance against viruses in prokaryotes. Science (2007) 29.74

Evolution and classification of the CRISPR-Cas systems. Nat Rev Microbiol (2011) 17.11

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature (2010) 14.21

Phage response to CRISPR-encoded resistance in Streptococcus thermophilus. J Bacteriol (2007) 13.67

Bacteriophage resistance mechanisms. Nat Rev Microbiol (2010) 7.38

CRISPR/Cas system and its role in phage-bacteria interactions. Annu Rev Microbiol (2010) 7.15

Diversity, activity, and evolution of CRISPR loci in Streptococcus thermophilus. J Bacteriol (2007) 7.00

Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM. Proc Natl Acad Sci U S A (2005) 4.46

Cleavage of phage DNA by the Streptococcus thermophilus CRISPR3-Cas system. PLoS One (2012) 3.16

Comparative analysis of CRISPR loci in lactic acid bacteria genomes. Int J Food Microbiol (2008) 2.98

Biodiversity and classification of lactococcal phages. Appl Environ Microbiol (2006) 2.51

Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04. J Bacteriol (2009) 2.15

Genomic organization and molecular analysis of virulent bacteriophage 2972 infecting an exopolysaccharide-producing Streptococcus thermophilus strain. Appl Environ Microbiol (2005) 2.09

Revenge of the phages: defeating bacterial defences. Nat Rev Microbiol (2013) 2.03

Receptor-binding protein of Lactococcus lactis phages: identification and characterization of the saccharide receptor-binding site. J Bacteriol (2006) 1.85

Lactococcal bacteriophage p2 receptor-binding protein structure suggests a common ancestor gene with bacterial and mammalian viruses. Nat Struct Mol Biol (2005) 1.84

Effect of exopolysaccharides on phage-host interactions in Lactococcus lactis. Appl Environ Microbiol (2002) 1.72

Morphological and genetic diversity of temperate phages in Clostridium difficile. Appl Environ Microbiol (2007) 1.71

Abortive infection mechanisms and prophage sequences significantly influence the genetic makeup of emerging lytic lactococcal phages. J Bacteriol (2006) 1.69

Complete genomic sequence of bacteriophage ul36: demonstration of phage heterogeneity within the P335 quasi-species of lactococcal phages. Virology (2002) 1.65

Modular structure of the receptor binding proteins of Lactococcus lactis phages. The RBP structure of the temperate phage TP901-1. J Biol Chem (2006) 1.57

Structure of lactococcal phage p2 baseplate and its mechanism of activation. Proc Natl Acad Sci U S A (2010) 1.53

Lactococcal phage genes involved in sensitivity to AbiK and their relation to single-strand annealing proteins. J Bacteriol (2004) 1.50

Evolution of Lactococcus lactis phages within a cheese factory. Appl Environ Microbiol (2009) 1.43

Methods for sampling of airborne viruses. Microbiol Mol Biol Rev (2008) 1.42

Microarray analysis of a two-component regulatory system involved in acid resistance and proteolytic activity in Lactobacillus acidophilus. Appl Environ Microbiol (2005) 1.41

The population and evolutionary dynamics of phage and bacteria with CRISPR-mediated immunity. PLoS Genet (2013) 1.41

Peptidoglycan hydrolase fusions maintain their parental specificities. Appl Environ Microbiol (2006) 1.35

Bacteriophages of lactic acid bacteria and their impact on milk fermentations. Microb Cell Fact (2011) 1.31

Llama antibodies against a lactococcal protein located at the tip of the phage tail prevent phage infection. J Bacteriol (2005) 1.31

Sequence and comparative genomic analysis of lactococcal bacteriophages jj50, 712 and P008: evolutionary insights into the 936 phage species. FEMS Microbiol Lett (2006) 1.28

Characterization of Streptococcus thermophilus host range phage mutants. Appl Environ Microbiol (2006) 1.27

Characterization of the two-component abortive phage infection mechanism AbiT from Lactococcus lactis. J Bacteriol (2002) 1.25

Galactose and lactose genes from the galactose-positive bacterium Streptococcus salivarius and the phylogenetically related galactose-negative bacterium Streptococcus thermophilus: organization, sequence, transcription, and activity of the gal gene products. J Bacteriol (2002) 1.24

Solution and electron microscopy characterization of lactococcal phage baseplates expressed in Escherichia coli. J Struct Biol (2010) 1.22

Crystal structure of the receptor-binding protein head domain from Lactococcus lactis phage bIL170. J Virol (2006) 1.22

The cell lysis activity of the Streptococcus agalactiae bacteriophage B30 endolysin relies on the cysteine, histidine-dependent amidohydrolase/peptidase domain. Appl Environ Microbiol (2006) 1.20

Role of galK and galM in galactose metabolism by Streptococcus thermophilus. Appl Environ Microbiol (2007) 1.20

Crystal structure and function of a DARPin neutralizing inhibitor of lactococcal phage TP901-1: comparison of DARPin and camelid VHH binding mode. J Biol Chem (2009) 1.19

Genome sequence and global gene expression of Q54, a new phage species linking the 936 and c2 phage species of Lactococcus lactis. J Bacteriol (2006) 1.16

Live and heat-killed Lactobacillus rhamnosus GG: effects on proinflammatory and anti-inflammatory cytokines/chemokines in gastrostomy-fed infant rats. Pediatr Res (2009) 1.15

Phage morphology recapitulates phylogeny: the comparative genomics of a new group of myoviruses. PLoS One (2012) 1.14

Noninvasive stool-based detection of infant gastrointestinal development using gene expression profiles from exfoliated epithelial cells. Am J Physiol Gastrointest Liver Physiol (2010) 1.14

Characterization of 1706, a virulent phage from Lactococcus lactis with similarities to prophages from other Firmicutes. Virology (2008) 1.13

Genome annotation and intraviral interactome for the Streptococcus pneumoniae virulent phage Dp-1. J Bacteriol (2010) 1.12

Analysis of two theta-replicating plasmids of Streptococcus thermophilus. Plasmid (2007) 1.12

Characterization of the cro-ori region of the Streptococcus thermophilus virulent bacteriophage DT1. Appl Environ Microbiol (2005) 1.11

Detection of airborne lactococcal bacteriophages in cheese manufacturing plants. Appl Environ Microbiol (2010) 1.10

Expression and site-directed mutagenesis of the lactococcal abortive phage infection protein AbiK. J Bacteriol (2005) 1.09

Characterization of Lactococcus lactis phage 949 and comparison with other lactococcal phages. Appl Environ Microbiol (2010) 1.07

KSY1, a lactococcal phage with a T7-like transcription. Virology (2007) 1.07

Identification of a new P335 subgroup through molecular analysis of lactococcal phages Q33 and BM13. Appl Environ Microbiol (2013) 1.06

Functional and structural basis for a bacteriophage homolog of human RAD52. Curr Biol (2008) 1.06

Crystal structure of ORF12 from Lactococcus lactis phage p2 identifies a tape measure protein chaperone. J Bacteriol (2008) 1.05

Characterization of a theta-replicating plasmid from Streptococcus thermophilus. Plasmid (2004) 1.04

CRISPR-Cas and restriction-modification systems are compatible and increase phage resistance. Nat Commun (2013) 1.04

Morphology, genome sequence, and structural proteome of type phage P335 from Lactococcus lactis. Appl Environ Microbiol (2008) 1.03

Bacteriophages in food fermentations: new frontiers in a continuous arms race. Annu Rev Food Sci Technol (2012) 1.03

The three major types of CRISPR-Cas systems function independently in CRISPR RNA biogenesis in Streptococcus thermophilus. Mol Microbiol (2014) 1.02

Bacteriophages of lactobacillus. Front Biosci (Landmark Ed) (2009) 1.02

Crystal structure of a chimeric receptor binding protein constructed from two lactococcal phages. J Bacteriol (2009) 1.01

Genetic and biochemical characterization of the phosphoenolpyruvate:glucose/mannose phosphotransferase system of Streptococcus thermophilus. Appl Environ Microbiol (2003) 1.01

Characterization of a galactokinase-positive recombinant strain of Streptococcus thermophilus. Appl Environ Microbiol (2004) 1.01

Characterization of the tre locus and analysis of trehalose cryoprotection in Lactobacillus acidophilus NCFM. Appl Environ Microbiol (2006) 0.99

Lactobacillli expressing llama VHH fragments neutralise Lactococcus phages. BMC Biotechnol (2007) 0.99

Characterization of two virulent phages of Lactobacillus plantarum. Appl Environ Microbiol (2012) 0.97

A proposed new bacteriophage subfamily: "Jerseyvirinae". Arch Virol (2015) 0.97

Molecular ecological analysis of fecal bacterial populations from term infants fed formula supplemented with selected blends of prebiotics. Appl Environ Microbiol (2008) 0.97

Identification and characterization of the phage gene sav, involved in sensitivity to the lactococcal abortive infection mechanism AbiV. Appl Environ Microbiol (2009) 0.95

AbiV, a novel antiphage abortive infection mechanism on the chromosome of Lactococcus lactis subsp. cremoris MG1363. Appl Environ Microbiol (2008) 0.94

Bacteriophages and dairy fermentations. Bacteriophage (2012) 0.93

Genome organization and characterization of the virulent lactococcal phage 1358 and its similarities to Listeria phages. Appl Environ Microbiol (2010) 0.93

Structure, adsorption to host, and infection mechanism of virulent lactococcal phage p2. J Virol (2013) 0.93

Novel food-grade plasmid vector based on melibiose fermentation for the genetic engineering of Lactococcus lactis. Appl Environ Microbiol (2002) 0.93

P087, a lactococcal phage with a morphogenesis module similar to an Enterococcus faecalis prophage. Virology (2009) 0.92

Staphylococcus epidermidis bacteriophages from the anterior nares of humans. Appl Environ Microbiol (2011) 0.90

Mobile CRISPR/Cas-mediated bacteriophage resistance in Lactococcus lactis. PLoS One (2012) 0.89

Structure and activity of AbiQ, a lactococcal endoribonuclease belonging to the type III toxin-antitoxin system. Mol Microbiol (2013) 0.89

Effect of the abortive infection mechanism and type III toxin/antitoxin system AbiQ on the lytic cycle of Lactococcus lactis phages. J Bacteriol (2013) 0.88

A reverse transcriptase-related protein mediates phage resistance and polymerizes untemplated DNA in vitro. Nucleic Acids Res (2011) 0.87

Genomic impact of CRISPR immunization against bacteriophages. Biochem Soc Trans (2013) 0.86

Phosphorylation of Streptococcus salivarius lactose permease (LacS) by HPr(His ~ P) and HPr(Ser-P)(His ~ P) and effects on growth. J Bacteriol (2003) 0.86

The proteome and interactome of Streptococcus pneumoniae phage Cp-1. J Bacteriol (2011) 0.86

Activation and transfer of the chromosomal phage resistance mechanism AbiV in Lactococcus lactis. Appl Environ Microbiol (2009) 0.85

Lactococcal abortive infection protein AbiV interacts directly with the phage protein SaV and prevents translation of phage proteins. Appl Environ Microbiol (2010) 0.85

The doubly phosphorylated form of HPr, HPr(Ser~P)(His-P), is abundant in exponentially growing cells of Streptococcus thermophilus and phosphorylates the lactose transporter LacS as efficiently as HPr(His~P). Appl Environ Microbiol (2005) 0.85

Distribution and composition of the lysis cassette of Lactococcus lactis phages and functional analysis of bacteriophage ul36 holin. FEMS Microbiol Lett (2004) 0.85

Genome analysis of two virulent Streptococcus thermophilus phages isolated in Argentina. Int J Food Microbiol (2009) 0.85

Characterization of coliphage PR772 and evaluation of its use for virus filter performance testing. Appl Environ Microbiol (2004) 0.84

Evaluation of bacterial contaminants found on unused paper towels and possible postcontamination after handwashing: a pilot study. Am J Infect Control (2011) 0.84

Involvement of the major capsid protein and two early-expressed phage genes in the activity of the lactococcal abortive infection mechanism AbiT. Appl Environ Microbiol (2012) 0.83

Characterization of genes involved in the metabolism of alpha-galactosides by Lactococcus raffinolactis. Appl Environ Microbiol (2003) 0.83

Lactococcal phage p2 ORF35-Sak3 is an ATPase involved in DNA recombination and AbiK mechanism. Mol Microbiol (2011) 0.83

Deciphering the function of lactococcal phage ul36 Sak domains. J Struct Biol (2009) 0.82

Structure and function of phage p2 ORF34(p2), a new type of single-stranded DNA binding protein. Mol Microbiol (2009) 0.82

The double-edged sword of CRISPR-Cas systems. Cell Res (2012) 0.82